Ecosyste.ms: OpenCollective

An open API service for software projects hosted on Open Collective.

Digital Biomarker Discovery Pipeline

We provide data, code sets, functions, and algorithms to make discovering digital biomarkers more accessible.
Collective - Host: opensource - https://opencollective.com/dbdp - Website: https://dbdp.org/ - Code: https://github.com/DigitalBiomarkerDiscoveryPipeline

Merge pull request #17 from DigitalBiomarkerDiscoveryPipeline/joe-cgm

Add new cgm data

github.com/DigitalBiomarkerDiscoveryPipeline/Digital_Health_Data_Repository - 5257faa34eaaa4905cbc3c3e73ff1ea8a4d48f05 authored over 2 years ago by Juseong (Joe) Kim <[email protected]>
Merge pull request #17 from anbreton/master

Fix ReadMe.md collaborators not appearing

github.com/DigitalBiomarkerDiscoveryPipeline/Pre-process - 35e6cd41be75f67ffab18d5e250297a2723912e7 authored over 2 years ago by Md Mobashir Hasan Shandhi <[email protected]>
Add files via upload

Updated sample figure.

github.com/DigitalBiomarkerDiscoveryPipeline/CovIdentify - dd46ff703fd9bd25e648d1a6876c5776b1278249 authored over 2 years ago by Md Mobashir Hasan Shandhi <[email protected]>
Update README.md

Added description on train-test split, feature selection, nested CV, ITA model development, and ...

github.com/DigitalBiomarkerDiscoveryPipeline/CovIdentify - 0c56d057c6d4117b0d38eb747972d3a3e5cdc1f5 authored over 2 years ago by Md Mobashir Hasan Shandhi <[email protected]>
Add files via upload

Sample Figure of the positivity rate (percentage) in ITA-identified subpopulation

github.com/DigitalBiomarkerDiscoveryPipeline/CovIdentify - 53b786f89d11d1a3d0ee13ea9101661c4525a419 authored over 2 years ago by Md Mobashir Hasan Shandhi <[email protected]>
updating ita_model_development

Updating with train-test split, feature selection on training data, nested CV, classification, a...

github.com/DigitalBiomarkerDiscoveryPipeline/CovIdentify - e171e6089b74ad160c8d3405b26340f528b22006 authored over 2 years ago by Md Mobashir Hasan Shandhi <[email protected]>
Adding ita_model_development code.

github.com/DigitalBiomarkerDiscoveryPipeline/CovIdentify - 27b2729e02737d41e3e1c7703fa29f29ffd8b5ab authored over 2 years ago by Md Mobashir Hasan Shandhi <[email protected]>
Update README.md

github.com/DigitalBiomarkerDiscoveryPipeline/CovIdentify - 1e6a65342a778f411c3d7a2e46370932abe39d9c authored over 2 years ago by Md Mobashir Hasan Shandhi <[email protected]>
Adding license

github.com/DigitalBiomarkerDiscoveryPipeline/CovIdentify - 1fa63bb8017e6aa8c5d0be656d36c061043f2fd7 authored over 2 years ago by Md Mobashir Hasan Shandhi <[email protected]>
Initial commit

github.com/DigitalBiomarkerDiscoveryPipeline/CovIdentify - 5de1e3cca7419cab28e4b115a5dee5a1c055370b authored over 2 years ago by Md Mobashir Hasan Shandhi <[email protected]>
update ReadMe.md for devicely repository

github.com/DigitalBiomarkerDiscoveryPipeline/Pre-process - 77355b27b1273c72bf9b3957adcdd30bf9681cc3 authored almost 3 years ago by Amanda Breton <[email protected]>
updating ReadMe.md for devicely respository

github.com/DigitalBiomarkerDiscoveryPipeline/Pre-process - 179516b7005fcce3ca6b8cf26b63319066ee4be5 authored almost 3 years ago by Amanda Breton <[email protected]>
Update download link instructions

github.com/DigitalBiomarkerDiscoveryPipeline/Digital_Health_Data_Repository - 80db2b815fbbd90d50bc6a4b05a2f0e6666d1d47 authored almost 3 years ago by Juseong (Joe) Kim <[email protected]>
Fixed a dbdp.org 404 error on ReadMe.md

github.com/DigitalBiomarkerDiscoveryPipeline/DBDP - 4aee9b87e35ac9c6178d4cfeed5e079c671a32eb authored almost 3 years ago by Amanda Breton <[email protected]>
Merge pull request #16 from anbreton/master

Update ReadMe for hyperlink

github.com/DigitalBiomarkerDiscoveryPipeline/Pre-process - f077e4fe6b41875f027c5a159789743aece0a19a authored almost 3 years ago by Md Mobashir Hasan Shandhi <[email protected]>
Merge branch 'master' into master

github.com/DigitalBiomarkerDiscoveryPipeline/Pre-process - 3a8fed2b1ba0bcdef0d412110490d3d6d3dce565 authored almost 3 years ago by Md Mobashir Hasan Shandhi <[email protected]>
Update ReadMe for hyperlink

github.com/DigitalBiomarkerDiscoveryPipeline/Pre-process - 124dfc373a2afd5e5270e1308041cd3ea3f8d015 authored almost 3 years ago by Amanda Breton <[email protected]>
Update ReadME for hyperlink

github.com/DigitalBiomarkerDiscoveryPipeline/Pre-process - 8243eae646f0aabf4088a89c13eccb0994b19024 authored almost 3 years ago by Amanda Breton <[email protected]>
Update ReadMe for hyperlink

github.com/DigitalBiomarkerDiscoveryPipeline/Pre-process - b5b8f098a34eb9f103472002609f0d74cb881252 authored almost 3 years ago by Amanda Breton <[email protected]>
Merge pull request #15 from DigitalBiomarkerDiscoveryPipeline/revert-12-master

Revert "Update README.md"

github.com/DigitalBiomarkerDiscoveryPipeline/Pre-process - 795a94578c5d95c9305666659995ba4b6a91bf4c authored almost 3 years ago by Md Mobashir Hasan Shandhi <[email protected]>
Revert "Update README.md"

github.com/DigitalBiomarkerDiscoveryPipeline/Pre-process - 510094f52bcce53a834d1a666aeeabfc1637b486 authored almost 3 years ago by Md Mobashir Hasan Shandhi <[email protected]>
Merge pull request #14 from DigitalBiomarkerDiscoveryPipeline/revert-13-mobashir-shandhi-patch-1

Revert "Update README.md"

github.com/DigitalBiomarkerDiscoveryPipeline/Pre-process - 011fd7ddc21e9d3b62ed655fc62f04f257178621 authored almost 3 years ago by Md Mobashir Hasan Shandhi <[email protected]>
Revert "Update README.md"

github.com/DigitalBiomarkerDiscoveryPipeline/Pre-process - ab17293a462c68759f295deb7ce030a7753cf400 authored almost 3 years ago by Md Mobashir Hasan Shandhi <[email protected]>
Merge pull request #13 from DigitalBiomarkerDiscoveryPipeline/mobashir-shandhi-patch-1

Update README.md

github.com/DigitalBiomarkerDiscoveryPipeline/Pre-process - aa31d18b70837f6bad81665c21096e5c617b21a8 authored almost 3 years ago by Md Mobashir Hasan Shandhi <[email protected]>
Update README.md

github.com/DigitalBiomarkerDiscoveryPipeline/Pre-process - 1903e4a8dbd819fac7be81b0389148c613c81657 authored almost 3 years ago by Md Mobashir Hasan Shandhi <[email protected]>
Merge pull request #12 from anbreton/master

Update README.md

github.com/DigitalBiomarkerDiscoveryPipeline/Pre-process - 0c3cb8683d71cbb463e5d781d6e1709ebb1fd7dd authored almost 3 years ago by Md Mobashir Hasan Shandhi <[email protected]>
Update ReadMe for FLIRT

Made it look more cohesive and cleaned up.

github.com/DigitalBiomarkerDiscoveryPipeline/Pre-process - 9271bef36ef01d5fb6bb01a52132ce10032e5a20 authored almost 3 years ago by Amanda Breton <[email protected]>
Update README.md

Updated to include FLIRT

github.com/DigitalBiomarkerDiscoveryPipeline/Pre-process - 85ff797817c19e54161b9643145f766334c55aa3 authored almost 3 years ago by Amanda Breton <[email protected]>
Merge pull request #14 from DigitalBiomarkerDiscoveryPipeline/fix-readme-links

Fix dataset links in main README

github.com/DigitalBiomarkerDiscoveryPipeline/Digital_Health_Data_Repository - 963ff5630f3ba551d7d37442038e66b305d0e26d authored over 3 years ago by Juseong (Joe) Kim <[email protected]>
Merge pull request #13 from BaiyingLu/main

Add the welltory covid dataset

github.com/DigitalBiomarkerDiscoveryPipeline/Digital_Health_Data_Repository - 07665a4732f4323d0a59049431da6f8995fa1fe2 authored over 3 years ago by Baiying Lu <[email protected]>
Merge pull request #12 from DigitalBiomarkerDiscoveryPipeline/Create-Folders

Re-organize datasets into respective folders

github.com/DigitalBiomarkerDiscoveryPipeline/Digital_Health_Data_Repository - f5c987d35dd7a24b55b81b19797aea19d9439ae3 authored over 3 years ago by Juseong (Joe) Kim <[email protected]>
Re-organize datasets into respective folders

github.com/DigitalBiomarkerDiscoveryPipeline/Digital_Health_Data_Repository - bd1bd8249b4588d67dca3f4cf187040245d7666f authored over 3 years ago by Juseong (Joe) Kim <[email protected]>
Merge pull request #11 from BaiyingLu/main

Restore the repo

github.com/DigitalBiomarkerDiscoveryPipeline/Digital_Health_Data_Repository - 29ccfb27620a547883617b0cd326203e9256279f authored over 3 years ago by Baiying Lu <[email protected]>
Clarify citation and remove duplicates

Citation instructions have been clarified.
Cite DBDP if tools are used; cite datasets independen...

github.com/DigitalBiomarkerDiscoveryPipeline/Digital_Health_Data_Repository - 26b26c85a5da59a08d9a671ebbe47c84f6f1f7ce authored over 3 years ago by Juseong (Joe) Kim <[email protected]>
Merge pull request #8 from DigitalBiomarkerDiscoveryPipeline/Preprocess_final

Preprocess final

github.com/DigitalBiomarkerDiscoveryPipeline/Pre-process - 549f6c5286e478bb181a5de9d73bbf379b42152a authored over 3 years ago by Geetika Singh <[email protected]>
Make the readme more intuitive

github.com/DigitalBiomarkerDiscoveryPipeline/Pre-process - dee88a3028ae00b18cc7595abfdafc1e674f7655 authored over 3 years ago by Geetika Singh <[email protected]>
Make the readme more intuitive

github.com/DigitalBiomarkerDiscoveryPipeline/Pre-process - 1d913a68be128c69d96f3a509022f5958d7337de authored over 3 years ago by Geetika Singh <[email protected]>
Merge pull request #7 from DigitalBiomarkerDiscoveryPipeline/Preprocess_final

Preprocess final

github.com/DigitalBiomarkerDiscoveryPipeline/Pre-process - 6cf204bb25d6ac8765b923a940d7246e3f3e2c23 authored over 3 years ago by Geetika Singh <[email protected]>
:memo: add links to cgmquantify package

github.com/DigitalBiomarkerDiscoveryPipeline/Digital_Health_Data_Repository - 22d51d655f27a6e0ca47b838cc9c222e3aa94c8b authored over 3 years ago by Juseong (Joe) Kim <[email protected]>
Merge pull request #6 from DigitalBiomarkerDiscoveryPipeline/Preprocess_final

Modify folders

github.com/DigitalBiomarkerDiscoveryPipeline/Pre-process - b4677005f5408169a8b2c9c506727b89d9107213 authored over 3 years ago by Geetika Singh <[email protected]>
Merge pull request #9 from jason-shang/main

merge jason into main

github.com/DigitalBiomarkerDiscoveryPipeline/Digital_Health_Data_Repository - 46526d0990b427d8f15642aa46b7de6e33c790c5 authored over 3 years ago by Jason Shang <[email protected]>
added links to pre-processing, heart rate variability & other corresponding modules

github.com/DigitalBiomarkerDiscoveryPipeline/Digital_Health_Data_Repository - a6fa923735966f3aaa8c42d564bb1c83f65b6669 authored over 3 years ago by Jason Shang <[email protected]>
Merge branch 'main' of https://github.com/jason-shang/Digital_Health_Data_Repository into main

github.com/DigitalBiomarkerDiscoveryPipeline/Digital_Health_Data_Repository - df657afe7e8af38f4c87023f27efe8fa077be279 authored over 3 years ago by Jason Shang <[email protected]>
Merge branch 'DigitalBiomarkerDiscoveryPipeline:main' into main

github.com/DigitalBiomarkerDiscoveryPipeline/Digital_Health_Data_Repository - 4ef2a90fce4d11908dabec69d39ca67c2951a6ec authored over 3 years ago by Jason Shang <[email protected]>
added MIT-BIH Noise Stress Test & STAFF III datasets

github.com/DigitalBiomarkerDiscoveryPipeline/Digital_Health_Data_Repository - f6cb7c497a678e816882515b64ffe65acd52787b authored over 3 years ago by Jason Shang <[email protected]>
Merge pull request #8 from BaiyingLu/main

Update the overall README with PPG, SPO2, and EEG

github.com/DigitalBiomarkerDiscoveryPipeline/Digital_Health_Data_Repository - ec0f24bbe405677b7b90918e2b4efa58b7d6a76c authored over 3 years ago by Baiying Lu <[email protected]>
Update the README with PPG, SPO2, and EEG datasets

github.com/DigitalBiomarkerDiscoveryPipeline/Digital_Health_Data_Repository - cbc9f93cebce99f7a8e0e238822b3010c278a206 authored over 3 years ago by Baiying Lu <[email protected]>
Merge pull request #7 from jason-shang/main

link updates

github.com/DigitalBiomarkerDiscoveryPipeline/Digital_Health_Data_Repository - 2a3e63417fcd629be6609bc311d1220bc39218ad authored over 3 years ago by Jason Shang <[email protected]>
Merge pull request #6 from juseong-kim/main

Add glucose datasets

github.com/DigitalBiomarkerDiscoveryPipeline/Digital_Health_Data_Repository - e6d3248d76f747b5767fec7689f31b456b65df0c authored over 3 years ago by Juseong (Joe) Kim <[email protected]>
Merge pull request #5 from jason-shang/main

Merge jason into master

github.com/DigitalBiomarkerDiscoveryPipeline/Digital_Health_Data_Repository - a1adefd6b2903b53ddfa3cc2d65f752cfd052039 authored over 3 years ago by Jason Shang <[email protected]>
Merge branch 'DigitalBiomarkerDiscoveryPipeline:main' into main

github.com/DigitalBiomarkerDiscoveryPipeline/Digital_Health_Data_Repository - b84fbff06d78712157c3b77e18d22e0a4eec4cfa authored over 3 years ago by Jason Shang <[email protected]>
reorganize additional information

github.com/DigitalBiomarkerDiscoveryPipeline/Digital_Health_Data_Repository - 05ae544f2ea8600adb49ec00a161f1a9d3322e42 authored over 3 years ago by Juseong (Joe) Kim <[email protected]>
Merge pull request #4 from BaiyingLu/main

Baiying/Push several new readmes

github.com/DigitalBiomarkerDiscoveryPipeline/Digital_Health_Data_Repository - a60be7734b0aba1aff15bb87c059bc28d2862594 authored over 3 years ago by Baiying Lu <[email protected]>
Merge pull request #4 from BaiyingLu/master

JSON to dataframe convertor functions

github.com/DigitalBiomarkerDiscoveryPipeline/Pre-process - 80a16262830d6b273a3ccd8b29f5724e2ced73a2 authored over 3 years ago by Geetika Singh <[email protected]>
ANSI/AAMI_EC13_Test_Waveforms dataset added

github.com/DigitalBiomarkerDiscoveryPipeline/Digital_Health_Data_Repository - 4501104ff426bfb63abeaddce6a3fca509144837 authored over 3 years ago by Jason Shang <[email protected]>
Merge pull request #3 from DigitalBiomarkerDiscoveryPipeline/joe_add

restructure data tables

github.com/DigitalBiomarkerDiscoveryPipeline/Digital_Health_Data_Repository - 12cce2f749e7daccc6dc8f71c4473f12285fbaa3 authored over 3 years ago by Juseong (Joe) Kim <[email protected]>
Merge pull request #2 from DigitalBiomarkerDiscoveryPipeline/Brinnae_add

Added dataset

github.com/DigitalBiomarkerDiscoveryPipeline/Digital_Health_Data_Repository - c7d29242ebaad64afc2f6ad0b8a367ec9b7353c9 authored over 3 years ago by RunsData <[email protected]>