github.com/sagemath/homebrew-science commits | Ecosyste.ms: OpenCollective

arcs: update 1.0.1 bottle for Linuxbrew.

4aa23c37f7593429ad96239e4f2f1a3b9fe97d19 authored about 7 years ago

arcs: update 1.0.1 bottle.

44a5a1dbb1273297cdfcb6e630ac4cca49e64945 authored about 7 years ago

arcs 1.0.1

depend on zlib on Linux

Closes #6523.

Signed-off-by: ilovezfs <[email protected]>

406fa302da56822edd40d0df8c54d8cbf517f89b authored about 7 years ago

wopr: update 1.36.1_1 bottle for Linuxbrew.

1e41b8ec26dcc538f072cead80395ec577c16640 authored about 7 years ago

wopr: update 1.36.1_1 bottle.

6a4111429477773dfe8971593d42c78184b0cb20 authored about 7 years ago

wopr: revision for icu4c and ticcutils

Closes #6565.

Signed-off-by: ilovezfs <[email protected]>

f96a09552714d6a2d423b532d1822e74ecb24c96 authored about 7 years ago

ucto: update 0.11 bottle for Linuxbrew.

b0aa1fc2df0e2298c38f1310df0a44ffffd1867b authored about 7 years ago

ucto: update 0.11 bottle.

7689909a905efb27226271cd1a83a3ab8b4fe5b5 authored about 7 years ago

ucto 0.11

run "make install" before "make check"

Closes #6561.

Signed-off-by: ilovezfs <ilovezfs@icloud....

591aa3cb7646b05aba00b818193efc0739f8b7fd authored about 7 years ago

timbl: update 6.4.10 bottle for Linuxbrew.

f5fc0b484cddc095fea98cb38a201239436acbec authored about 7 years ago

timbl: update 6.4.10 bottle.

d1ba6aaa308c7eadc1f324cfe3a36bc16196d514 authored about 7 years ago

timbl 6.4.10

Closes #6558.

Signed-off-by: ilovezfs <[email protected]>

9f553fbd1c9b84f4c67f3f55a9fe400b11864a97 authored about 7 years ago

libfolia: update 1.11 bottle for Linuxbrew.

f5d1b41fbe70858ef20190cc4b365bdf6343bda5 authored about 7 years ago

libfolia: update 1.11 bottle.

b40ebd8ba2b55bb3dc07b25410e0e37d6f3e6b8d authored about 7 years ago

libfolia 1.11

Closes #6543.

Signed-off-by: ilovezfs <[email protected]>

afb5401a03c048cc294b72e3f6f90cd51989e6f7 authored about 7 years ago

ticcutils: update 0.17 bottle for Linuxbrew.

175cd221da3bcf13929d1f5440fc3b79ff591726 authored about 7 years ago

ticcutils: update 0.17 bottle.

dc371d740529c746697e8cb15b1cca179981a6a6 authored about 7 years ago

ticcutils 0.17

depend on boost and icu4c
depend on bzip2 and zlib on Linux

Closes #6557.

Signed-off-by: ilove...

021545b0358f06fb4d1f6e8e70fec266d6bf2725 authored about 7 years ago

xmi-msim: update 7.0 bottle.

28745750a866b82cf9d627ac9b1984035da0d04e authored about 7 years ago

xmi-msim: update 7.0 bottle for Linuxbrew.

a548534496c4ef54c75b6cabc4ade62297bf3d62 authored about 7 years ago

xmi-msim 7.0

Closes #6563.

Signed-off-by: ilovezfs <[email protected]>

aa78c4c33f327d5c4c0fd0e3dd6c9250631cce45 authored about 7 years ago

abinit: add 8.6.3 bottle for Linuxbrew.

11a92dca69860e0cfb4db9b41fa329aba4e50e86 authored about 7 years ago

abinit: add 8.6.3 bottle.

da76cd67a83e94ce447bbcbe73afe19a32698ed0 authored about 7 years ago

abinit 8.6.3

Closes #6519.

Signed-off-by: ilovezfs <[email protected]>

f7fb6d50f06a6bfa664c5feb9c2aae0b3a081fa9 authored about 7 years ago

iqtree: update 1.6.0 bottle for Linuxbrew.

37f5c60eb3baeb808091d08d84c5d6b461bbdd60 authored about 7 years ago

iqtree: update 1.6.0 bottle.

4b43e65742b8484d60f55747eec05bf2283e8614 authored about 7 years ago

iqtree 1.6.0

Closes #6540.

Signed-off-by: ilovezfs <[email protected]>

7c972e7491b28c132345063e7b3115107903f950 authored about 7 years ago

sratoolkit: migrate to homebrew/core

6e064b6d12475446166ea4c46d9f0ced2af8135f authored about 7 years ago

kraken: update 1.0 bottle for Linuxbrew.

b63257f65469e15e9f2475d04fdcc77ad80c1161 authored about 7 years ago

kraken: update 1.0 bottle.

3d9e9a21363090eedfe94a55a3051fd2d057e035 authored about 7 years ago

kraken 1.0

Closes #6542.

Signed-off-by: ilovezfs <[email protected]>

dc1465828d569f87dbd58b3b41b977e51aa501de authored about 7 years ago

spades: migrate to homebrew/core (#6504)

See https://github.com/Homebrew/homebrew-core/pull/21956

a96fed0d9e14620ee5046bcbd04547a4ef52544f authored about 7 years ago

bcalm: update 2.2.0 bottle for Linuxbrew.

8e334c6ec70b51aa69746040a86ff13603ecf2ea authored about 7 years ago

bcalm: update 2.2.0 bottle.

8e9e0dba2b74555b25dc9c910bf216228866ba26 authored about 7 years ago

bcalm 2.2.0

Closes #6527.

Signed-off-by: ilovezfs <[email protected]>

e5c97f294d7b07b9caf794f6b48ed3c22b9d5c22 authored about 7 years ago

alpscore: add 2.1.0 bottle for Linuxbrew.

c7a1b9e5f97105d8285e36871b09bd309ea00bec authored about 7 years ago

alpscore: add 2.1.0 bottle.

db1c12a9e187f1a2ca6e10201762b417229eacde authored about 7 years ago

alpscore 2.1.0

remove C++11 option
depend on eigen
fix audit issues
make test work while unlinked

Closes #6521...

97c7d320bd4902937d223840bdd75e3c84fd85f7 authored about 7 years ago

insighttoolkit: add 4.13.0 bottle.

38e225f1e8f2f69b63ac667d53b8b8eb5dc43ee4 authored about 7 years ago

insighttoolkit 4.13.0

Closes #6539.

Signed-off-by: ilovezfs <[email protected]>

a6072178a4447434220ba8dd6c8967b93d76c12c authored about 7 years ago

vsearch: update 2.6.2 bottle for Linuxbrew.

5337f8aae16fa34b0e3eb43f8adf5c19c6890bc3 authored about 7 years ago

vsearch: update 2.6.2 bottle.

62de24d317a9046007b652423ac1ce4282251a24 authored about 7 years ago

vsearch 2.6.2

Closes #6562.

Signed-off-by: ilovezfs <[email protected]>

51d50f91a192593c1f7b41b0ad3dbde09748c95f authored about 7 years ago

cmor: add 3.3.0 bottle.

2f7acc195d36bb022396674b4c6dbd3ce0d9afc5 authored about 7 years ago

cmor 3.3.0

Closes #6534.

Signed-off-by: ilovezfs <[email protected]>

21c8c58699101879a73fe0eef3b04eb8796dae96 authored about 7 years ago

cmdstan: add 2.17.1 bottle.

6b712afd371f7bac6b9c59ee2589a92c062b7823 authored about 7 years ago

cmdstan 2.17.1

Closes #6533.

Signed-off-by: ilovezfs <[email protected]>

2d1fac87e47040aba230262767e1cd5e8dbd36b6 authored about 7 years ago

primer3: update 2.4.0 bottle for Linuxbrew.

e129177e3e19f90271b2c2fe870a04cc035ba8ab authored about 7 years ago

primer3: update 2.4.0 bottle.

4f804dc3cc42d05f0b69fe259702276c61cf9cb9 authored about 7 years ago

primer3 2.4.0

Closes #6554.

Signed-off-by: ilovezfs <[email protected]>

c09c214de085f227627094b0edadf0a8b4d8feaa authored about 7 years ago

prank: update 170427 bottle for Linuxbrew.

b3baeeeba39386748fd5ff4d4a32ed5731661e30 authored about 7 years ago

prank: update 170427 bottle.

3f8294456ee40d0358b76e98eb08e0296344082f authored about 7 years ago

prank 170427

Closes #6553.

Signed-off-by: ilovezfs <[email protected]>

7b8787597798ff4e97955e91163d784987e5ad92 authored about 7 years ago

ococo: update 0.1.2.6 bottle for Linuxbrew.

bf54f978953ba6a04b47fd5b34a1f7983ef0a5bf authored about 7 years ago

ococo: update 0.1.2.6 bottle.

be68aa6f83044f645f49eca78fc8e196218608af authored about 7 years ago

ococo 0.1.2.6

Closes #6548.

Signed-off-by: ilovezfs <[email protected]>

ee231ff357881ffbc51d2f6b0d8efe6787028109 authored about 7 years ago

nonpareil: update 3.2 bottle for Linuxbrew.

b842016cf6dd4a7ead00658b06da1d1d4a50c986 authored about 7 years ago

nonpareil: update 3.2 bottle.

2ad80e22d9d24c798f26daa629ea5775f4577536 authored about 7 years ago

nonpareil 3.2

Closes #6547.

Signed-off-by: ilovezfs <[email protected]>

6b5e96411bb04a7e056ee448a0a6c4db7954e96e authored about 7 years ago

nextflow 0.26.4 (#6546)

229e4c1c07b24ac419cade7880701486e3233704 authored about 7 years ago

jellyfish: update 2.2.7 bottle for Linuxbrew.

635aeb54fa5e49c2e8684184b6ceb7a8947a8c29 authored about 7 years ago

jellyfish: update 2.2.7 bottle.

7f654ada6a45bae83b64133ba4a4dd429a2b317c authored about 7 years ago

jellyfish 2.2.7

Closes #6541.

Signed-off-by: ilovezfs <[email protected]>

f80a047b2bc62821c60cd9a04814ac5c1ac69a3d authored about 7 years ago

boost-compute: add 1.66.0 bottle.

854decc887adc4988efe6d1979d3f90dddee2115 authored about 7 years ago

boost-compute 1.66.0

Closes #6529.

Signed-off-by: ilovezfs <[email protected]>

eeacd0531576dd1a90d2a21f01ff97d8ea7be0ff authored about 7 years ago

bedops: update 2.4.30 bottle for Linuxbrew.

1828797a2efd6fa74e1f7e4c2523c220aae83090 authored about 7 years ago

bedops: update 2.4.30 bottle.

ad51768e2e450ef333dfd48d518624a2b75af9fb authored about 7 years ago

bedops 2.4.30

Closes #6528.

Signed-off-by: ilovezfs <[email protected]>

ec50871cc9b0aa41da71efea90a13646afd0075b authored about 7 years ago

astrometry-net: update 0.73 bottle for Linuxbrew.

ca3112b57c0838e85357862143e481c8ec4324e3 authored about 7 years ago

astrometry-net: update 0.73 bottle.

6cb7b185cb8297388ba6b23af1f5306e4dee7097 authored about 7 years ago

astrometry-net 0.73

Closes #6525.

Signed-off-by: ilovezfs <[email protected]>

bb0d5ac0a51dfcca1e8b725a5f69b5c2f20aac8c authored about 7 years ago

astral 5.5.6 (#6524)

ab950822afd2433afdc5eba12d7aa80195be6fea authored about 7 years ago

alembic: update 1.7.5 bottle for Linuxbrew.

f1d50c39443328cb26bb7446373a976a05649b80 authored about 7 years ago

alembic: update 1.7.5 bottle.

a7668e0654dfc5b1ef394aa0cbfe5e88143ad2c5 authored about 7 years ago

alembic 1.7.5

Closes #6520.

Signed-off-by: ilovezfs <[email protected]>

4bfbd556d99fbf7ef4f9c92f91ab129b91ce52fe authored about 7 years ago

bcftools: migrate to homebrew/core (#6512)

See https://github.com/Homebrew/homebrew-core/pull/22016

a30de37d10607b78444cb8bce3bc74d2501a67b7 authored about 7 years ago

diamond: migrate to homebrew/core

8a3f06880ba0c3ca915f2a228c3a4354480b1c7c authored about 7 years ago

Aliases/[email protected]: remove versioned alias

c36b2e103c23fd9898d7f55a7c3113a2ddb6fcc1 authored about 7 years ago

bamtools: migrate to homebrew/core

c39ffc466eb941262a66fe0bf6f78d50a79cc4d8 authored about 7 years ago

samtools: migrate to homebrew/core

d0ef8b58e83eae7f2af7c9990d6288c1f4f48efc authored about 7 years ago

bcftools: update 1.6 bottle for Linuxbrew.

de69c950ed99c7a2af0917d77208a7287802bbc0 authored about 7 years ago

bcftools: update 1.6 bottle.

80c7547187e4a3a7314fe98200a727ab87ef3d6f authored about 7 years ago

bcftools: Fix build with upstream patch

Depend on gsl by default.
Do not recommend samtools.

Closes #6510.

Signed-off-by: Shaun Jackma...

bc26a96bcee4f54c3d9e1318ea4b8782610318c1 authored about 7 years ago

bcftools 1.6

ade069a3f7bba898de4580184addf55a0b7211e2 authored about 7 years ago

samtools: update 1.6 bottle for Linuxbrew.

7432ccc681dbc681035fd91725bdcdc08ed7b171 authored about 7 years ago

samtools: update 1.6 bottle.

b7078846037f742e30e7c60c93d1e1f854a456c5 authored about 7 years ago

samtools: Add a test

Closes #6509.

Signed-off-by: Shaun Jackman <[email protected]>

ba900e9c01687864f2a4976a201171800e147630 authored about 7 years ago

samtools 1.6

4c1c29791e20613e2b8eb192994e072358db72fa authored about 7 years ago

tbl2asn: update 25.6 bottle for Linuxbrew.

42b7ecb0924bc57528b97a39166934e4a2110ff8 authored about 7 years ago

tbl2asn: update 25.6 bottle.

7dd927801b7205caad81369a094817b9806663a1 authored about 7 years ago

tbl2asn 25.6

Depends on libidn and zlib for Linux.

Closes #6508.

Signed-off-by: Shaun Jackman <sjackman@gma...

275f69160a5a41a6ae0c517f2f47af91f57b5990 authored about 7 years ago

cp2k: migrate to homebrew/core

159d9e22830cfaadaf7af1b5f01a377001ca9d76 authored about 7 years ago

lammps: migrate to homebrew/core

1445daa32556e88dbedc7045c8a0a938f0f9537c authored about 7 years ago

masurca: Fix style

2ab7df95505fb5d63c599b1ca18896377a992730 authored about 7 years ago

masurca: update 3.2.3 bottle for Linuxbrew.

58f927255f7cf4085f43b2bf4b6da181c1f3ee6e authored about 7 years ago

masurca 3.2.3

fe9e1cb795c5f80de6b63bc512b90f891c2a4709 authored about 7 years ago

Remove rstudio-server (#6507)

Migrated to https://github.com/randy3k/homebrew-rstudio-server/blob/master/rstudio-server.rb

16da5a4317fe195e73d616e62b7b771686f65753 authored about 7 years ago

CONTRIBUTING.md: Fix example Ruby syntax (#6502)

fa307c29cccfb509de6db1ffe06dd5582fd8ac78 authored about 7 years ago

gap: update 4.8.9 bottle for Linuxbrew.

9fbea1ac9173d29a60e12be9ee3a7cc51456430b authored about 7 years ago

gap: update 4.8.9 bottle.

a290167ea2ee234ea798775f24b56fd5ee7c8204 authored about 7 years ago