github.com/sagemath/homebrew-science commits | Ecosyste.ms: OpenCollective

moab 5.0.0

depend on openblas for Linux

Closes #6596.

Signed-off-by: ilovezfs <[email protected]>

0a67e5ed71d2d02f11cca14d4b4878bcc8a280b0 authored about 7 years ago

mlpack: add 2.2.5 bottle for Linuxbrew.

cf9527f7a5cbe04ab8d353df1a7124c8fa7b9cf9 authored about 7 years ago

mlpack: add 2.2.5 bottle.

f7e8e679cfb2d39d7a00f21acd008dc8cc8d79e5 authored about 7 years ago

mlpack 2.2.5

Closes #6595.

Signed-off-by: ilovezfs <[email protected]>

67b113d01fb35a73a19750c42fdb28434fd9c2b0 authored about 7 years ago

lmfit: update 6.4 bottle for Linuxbrew.

a230deef124462554ac542ec3a88c532b2bcf0c3 authored about 7 years ago

lmfit: update 6.4 bottle.

4cae6c63545b96283a89f59d500cbcb8639bae0c authored about 7 years ago

lmfit 6.4

Closes #6594.

Signed-off-by: ilovezfs <[email protected]>

9e6e6c66972b7eb4ace7fcd0de833f696164f4ea authored about 7 years ago

lis: add 2.0.6 bottle for Linuxbrew.

07bbe52d6ac9a48d1d1a1f8790aef1df7fc87d43 authored about 7 years ago

lis: add 2.0.6 bottle.

722d9106d6f2f6a5834cfc558571e13caf1dc824 authored about 7 years ago

lis 2.0.6

Closes #6593.

Signed-off-by: ilovezfs <[email protected]>

b77ec7c2993030c7dc6549a397cef66e078507d9 authored about 7 years ago

last: update 916 bottle for Linuxbrew.

1ddfeae83011bfc6e3c40c64c47447499dbc2843 authored about 7 years ago

last: update 916 bottle.

3e60b446276596cf23b4ece0a83f26b5b42395a8 authored about 7 years ago

last 916

depend on zlib for Linux

Closes #6591.

Signed-off-by: ilovezfs <[email protected]>

26784f7caaeec449dd7563047c2d9f26f8f48e20 authored about 7 years ago

libsbml: update 5.16.0 bottle for Linuxbrew.

0bb035c4058f6088208aa4cbdbc80504477faa42 authored about 7 years ago

libsbml: update 5.16.0 bottle.

f29e3c9409fd162b96fa12d55eb83b8e28e10099 authored about 7 years ago

libsbml 5.16.0

depend on libxml2 for Linux

Closes #6592.

Signed-off-by: ilovezfs <[email protected]>

1287f45e463a2d5e29da59685ddbc75203e43035 authored about 7 years ago

kent-tools: update 358 bottle.

5e7eeef270f129b3a9e471818fddce2b33fcaaa1 authored about 7 years ago

kent-tools 358

Closes #6589.

Signed-off-by: ilovezfs <[email protected]>

67032155c5cf365e26df5d123237aafb6160a6ad authored about 7 years ago

h5utils: update 1.13 bottle for Linuxbrew.

66bf183f0209eb6bc5727acf50a08bc19213baac authored about 7 years ago

h5utils: update 1.13 bottle.

2dd31c01cdd023b5a3e5321094d73ba30015fd36 authored about 7 years ago

h5utils 1.13

Closes #6588.

Signed-off-by: ilovezfs <[email protected]>

34e6dce7eda1cd87e60271a5f0b4da21316710e0 authored about 7 years ago

gmcloser: update 1.6 bottle for Linuxbrew.

352d666aaa3e1bc6a2f7a3b9c39486ee31860562 authored about 7 years ago

gmcloser: update 1.6 bottle.

15b325488613349e0bcecbdd340933fc2f379f86 authored about 7 years ago

gmcloser 1.6

Closes #6587.

Signed-off-by: ilovezfs <[email protected]>

91fc1086124d2d9745779a5cf8c90986c3bbc8ba authored about 7 years ago

glimmerhmm: update 3.0.4 bottle for Linuxbrew.

55855930eb325d1b78e6ced98ddc056338a24c06 authored about 7 years ago

glimmerhmm: update 3.0.4 bottle.

d6fdde95615774646e0a5c93dcf02f10abf6c7e1 authored about 7 years ago

glimmerhmm 3.0.4

Closes #6585.

Signed-off-by: ilovezfs <[email protected]>

4134fdb1bd80a2e0c964c26f64da33830a08f516 authored about 7 years ago

gfan: add 0.6.2 bottle for Linuxbrew.

c64ce229310c91c4fa07d1778f39e77f65673469 authored about 7 years ago

gfan: add 0.6.2 bottle.

e38eca543fe2f7287fff2bcc8d9ce7e3a44173d4 authored about 7 years ago

gfan 0.6.2

Closes #6584.

Signed-off-by: ilovezfs <[email protected]>

4faeeb076329246f3d6edf6419e73f3e73fa08c4 authored about 7 years ago

fastq-tools: update 0.8 bottle for Linuxbrew.

6bb7b6a379564438437a51fbaf3893a292efaf51 authored about 7 years ago

fastq-tools: update 0.8 bottle.

a5de93db4d8afe377e594f4eef68eae94ddba59a authored about 7 years ago

fastq-tools 0.8

Closes #6583.

Signed-off-by: ilovezfs <[email protected]>

5e0ffa40e9fa41cffac775800af20782738aa2d6 authored about 7 years ago

fasta: update 36.3.8 bottle for Linuxbrew.

d4cc4ab1c39b9dd3ab22668ff58cd9750a45e0aa authored about 7 years ago

fasta: update 36.3.8 bottle.

b6548de643444c70702d8e06776e4856b373aabd authored about 7 years ago

fasta 36.3.8

depend on zlib for Linux

Closes #6582.

Signed-off-by: ilovezfs <[email protected]>

4fe9be753645f5446a9b9111783e14fb8790d3a7 authored about 7 years ago

dssp: add 3.0.0 bottle for Linuxbrew.

c529cc0e68567c0a79e3dab1ee97c35e8e546d2a authored about 7 years ago

dssp: add 3.0.0 bottle.

4220d17b2f9110b6e768305f17108ebf360808b3 authored about 7 years ago

dssp 3.0.0

patch for C++11 and Boost >= 1.65

Closes #6581.

Signed-off-by: ilovezfs <[email protected]>

b8e27f46007749509e0397a1c2b5b08845c00a6a authored about 7 years ago

des: update 5.0.1 bottle for Linuxbrew.

0e10d6dc889310acd00a7dd48cac2f49e6c21723 authored about 7 years ago

des: update 5.0.1 bottle.

8fc7b2ecac8ff7393a200e4af9ce0cfb9ed3822b authored about 7 years ago

des 5.0.1

Closes #6580.

Signed-off-by: ilovezfs <[email protected]>

ec6861c4af6cce9626317103826e48e0c01fff59 authored about 7 years ago

cdsclient: update 3.84 bottle for Linuxbrew.

7f6e18b30292b2d9c15bd998262a72eba21d1c89 authored about 7 years ago

cdsclient: update 3.84 bottle.

79810419b4d86c8a97baa18f2e1835cd1e811553 authored about 7 years ago

cdsclient 3.84

Closes #6576.

Signed-off-by: ilovezfs <[email protected]>

b5d1eb9c10b52d36c3f69890778f438abd180239 authored about 7 years ago

ccfits: add 2.5 bottle for Linuxbrew.

59de2e35f39946fb41c54e9f9580d93dab3119e5 authored about 7 years ago

ccfits: add 2.5 bottle.

547fe2dc00271181c46e8a73cda7f42e9d30eb74 authored about 7 years ago

ccfits 2.5

Closes #6575.

Signed-off-by: ilovezfs <[email protected]>

23566a2da60dd36a6d3de2ed909ecb0feced1233 authored about 7 years ago

aragorn: update 1.2.38 bottle for Linuxbrew.

2b4d8f3b671bd1e537be7b4e71a160ed8af5cdc2 authored about 7 years ago

aragorn: update 1.2.38 bottle.

94f3816162168c49ef101ef4c4609aa1c92c4118 authored about 7 years ago

aragorn 1.2.38

Closes #6573.

Signed-off-by: ilovezfs <[email protected]>

b88e204c67913cefc9c2967bd1cd0de86a2e45e0 authored about 7 years ago

alglib: update 3.12.0 bottle for Linuxbrew.

294e8ce803f49a7b2a458aa1f83c19d67587ffc6 authored about 7 years ago

alglib: update 3.12.0 bottle.

dce374e6b8c63d69944c8e70b1e5dea68af94ff0 authored about 7 years ago

alglib 3.12.0

Closes #6572.

Signed-off-by: ilovezfs <[email protected]>

d9d796349781a9832dd00f177f3c5e8f12676d72 authored about 7 years ago

cuba: update 4.2 bottle.

99525ea73c949e3b6ff7a213a3463fa41aa27121 authored about 7 years ago

cuba 4.2

Closes #6579.

Signed-off-by: ilovezfs <[email protected]>

8e26c519c588e352c4f7a11fcfda78acdb1b95a4 authored about 7 years ago

clustal-omega: update 1.2.4 bottle for Linuxbrew.

8a177bb406e081bc223da607e5034dd38fbc265b authored about 7 years ago

clustal-omega: update 1.2.4 bottle.

2b8e472df094020c1dc6636bc11ae804832f5d25 authored about 7 years ago

clustal-omega 1.2.4

Closes #6577.

Signed-off-by: ilovezfs <[email protected]>

0a9fb39d5da24a6a7ad125c89c4c09c95264b81a authored about 7 years ago

bbtools: update 37.77 bottle for Linuxbrew.

7b94395e242fc45a5973b2ac7e22191fa823c151 authored about 7 years ago

bbtools: update 37.77 bottle.

218c3e5d1324afbc0f6ebd3c0826e3f1a7bc2773 authored about 7 years ago

bbtools 37.77

Closes #6574.

Signed-off-by: ilovezfs <[email protected]>

c2d63e1bad9e9393464408fcfd751f8f1b66e231 authored about 7 years ago

adol-c: update 2.6.3 bottle for Linuxbrew.

f0363266b0a254a888946e4cbc907492847cb4bb authored about 7 years ago

adol-c: update 2.6.3 bottle.

085a0b861029dba21c09ab73300b5169da066ab0 authored about 7 years ago

adol-c 2.6.3

Closes #6571.

Signed-off-by: ilovezfs <[email protected]>

5b25b93ee32cea823aadda615c526b19cf7476c0 authored about 7 years ago

dynare: update 4.5.3 bottle.

998bec5ad1136075ddb5c7185f23c7fc247374c9 authored about 7 years ago

dynare 4.5.3

Closes #6569.

Signed-off-by: ilovezfs <[email protected]>

0ecf6cc6fbe18c7238998ebe45dbb6e19c379bc3 authored about 7 years ago

trinity: skip C++ stdlib check

36be1b91208516b00cc2e3d704b2a87441cd31fc authored about 7 years ago

iqtree: update 1.6.1 bottle for Linuxbrew.

3c8504fc757e0803974db153c6cc3dce20fa3510 authored about 7 years ago

iqtree: update 1.6.1 bottle.

c082ab55a1515afa148b847b1164a03f183000f1 authored about 7 years ago

iqtree 1.6.1

Closes #6567.

Signed-off-by: ilovezfs <[email protected]>

094b92f8e1243fe16822a4cc1b474863cec973f1 authored about 7 years ago

circlator: update 1.5.3 bottle for Linuxbrew.

7ce1c64c8a08e15019ecb8e649f192e47430ad37 authored about 7 years ago

circlator: update 1.5.3 bottle.

a655072e0d2b83b10dc60a79e9c21ce77874e25e authored about 7 years ago

circlator 1.5.3

Closes #6532.

Signed-off-by: ilovezfs <[email protected]>

9903e9d09d84c68d9d4c1b14d09ec53ac23e0dee authored about 7 years ago

trinity: update 2.5.1 bottle for Linuxbrew.

bd0cf5694b8199d7f2db6bd246d01205f9dc0c18 authored about 7 years ago

trinity: update 2.5.1 bottle.

6f13cecbac8a65b2353c702738ce261f9e4c781c authored about 7 years ago

trinity 2.5.1

Closes #6560.

Signed-off-by: ilovezfs <[email protected]>

9187df6750ea0f9cc9d874fac320adc90fb0a4f7 authored about 7 years ago

libsequence: add 1.9.2 bottle for Linuxbrew.

55b4d303b3d92868b8818ac0f1e5726390e4992b authored about 7 years ago

libsequence: add 1.9.2 bottle.

de591bf97957da51a857b6317bc0ac0f1095cf67 authored about 7 years ago

libsequence 1.9.2

Closes #6544.

Signed-off-by: ilovezfs <[email protected]>

732db9e3f287dd133cdec4ef087aee9ee87db7cb authored about 7 years ago

bowtie: update 1.2.2_p1 bottle for Linuxbrew.

e09805ca7a5f6454593a92b9d822c7164e189aab authored about 7 years ago

bowtie: update 1.2.2_p1 bottle.

519a91751f759deff32520cb3593269c1301136a authored about 7 years ago

bowtie 1.2.2_p1

Closes #6530.

Signed-off-by: ilovezfs <[email protected]>

f8a06c7207589a470eb813d0f70bcd03e0046993 authored about 7 years ago

atram: update 1.3.0 bottle for Linuxbrew.

7fdc28161edbf134611673f5805845df2cb3227f authored about 7 years ago

atram: update 1.3.0 bottle.

7bc4d2882049e700702f2d06d3f184033aa1104d authored about 7 years ago

atram 1.3.0

Closes #6526.

Signed-off-by: ilovezfs <[email protected]>

351782a7e85800ee55d2c83c3729a3d57800a91a authored about 7 years ago

seqtk: migrate to homebrew/core (#6516)

See https://github.com/Homebrew/homebrew-core/pull/22074

bca93bd844e25009af0c6c0f0139578d2e02ab33 authored about 7 years ago

openimageio: add 1.8.6 bottle.

adaf44af3beb852e66764fc98675f2b5ab5091bb authored about 7 years ago

openimageio 1.8.6

Closes #6550.

Signed-off-by: ilovezfs <[email protected]>

0fd770cf4fb8e417e12e96a17edc8c610c13fc56 authored about 7 years ago

radx 20171016 (#6556)

fails with clang
fails with gcc 7
fails with gcc 6
needs C++11
builds successfully with gcc ...

64d4c702cfe2d039b38816e666424192184c294f authored about 7 years ago

tmv-cpp: update 0.75 bottle for Linuxbrew.

a9deab639af7123cd93c523ce0fa9934622eb14c authored about 7 years ago

tmv-cpp: update 0.75 bottle.

810cc5ce0e0f75178a7a0086b87994a73950ff4e authored about 7 years ago

tmv-cpp 0.75

Closes #6559.

Signed-off-by: ilovezfs <[email protected]>

277e3b2a1583e08b5f64bf313a8f372f5602682e authored about 7 years ago

plink2: update 1.90b5 bottle for Linuxbrew.

705f23714c2a6f51acefd2eb85052fe177ac75a8 authored about 7 years ago

plink2: update 1.90b5 bottle.

48175ce2904650b3932812aa0f84ce9ec985991d authored about 7 years ago

plink2 1.90b5

Closes #6552.

Signed-off-by: ilovezfs <[email protected]>

43cd0c114ba9a53bb1e0b809fdd214674469e555 authored about 7 years ago

orthofinder 2.1.2 (#6551)

depend on the scipy formula instead of the pip package

ee95a29f982811178e17853aa8dc3141ea31afa2 authored about 7 years ago

bwa: update 0.7.17 bottle for Linuxbrew.

6e83fb963e443fd840783c0bbf145ccac59dc927 authored about 7 years ago

bwa: update 0.7.17 bottle.

ba7e28117b48db07591f8956255cbab69adc5ecb authored about 7 years ago

bwa 0.7.17

fix audit

Closes #6531.

Signed-off-by: ilovezfs <[email protected]>

a2c4ec255842c3d972e24ef3957e8cef13870b8b authored about 7 years ago