Ecosyste.ms: OpenCollective

An open API service for software projects hosted on Open Collective.

github.com/sagemath/homebrew-science

:snowflake: Scientific formulae for Homebrew and Linuxbrew (legacy)
https://github.com/sagemath/homebrew-science

visp: update 3.0.1_2 bottle.

f7810572b8a3da073b64c2680a0abc8f093c3548 authored over 7 years ago
visp: revision for jpeg

Closes #6088.

Signed-off-by: Shaun Jackman <[email protected]>

c78e25de169eee1fbb4b2bad66aafd9c36b6c7d2 authored over 7 years ago
lammps: update 2017.03.31_2 bottle for Linuxbrew.

86444a9ae0c597e5d74abd25b85dd27ae2cfb401 authored over 7 years ago
mathgl: update 2.3.5.1_1 bottle for Linuxbrew.

418d7355303cd9269dee932e8d63e1aabdb7b96d authored over 7 years ago
lammps: update 2017.03.31_2 bottle.

2e895363b50927ee45f7152e36b8203a6d6f3873 authored over 7 years ago
xfig: update 3.2.6a_1 bottle.

7a71237c6ab96718255a849e990de0e21b334ae0 authored over 7 years ago
mathgl: update 2.3.5.1_4 bottle.

ed13a6dd8c84842afbd174cb94b2326f330bb9fd authored over 7 years ago
xfig: revision for jpeg

Closes #6082.

Signed-off-by: Michka Popoff <[email protected]>

92afc72b9b19610e007334235f62241d70b0d75a authored over 7 years ago
mathgl: revision for jpeg

8022c5a99ca99e04695a98e57bc142c6f11c2888 authored over 7 years ago
lammps: revision for jpeg

d42d77a2236f4bb89d702021a1ad5febcd04b490 authored over 7 years ago
maq: update 0.7.1_1 bottle for Linuxbrew.

c89413944b8d9b07b10abaf814aed1cc6c8e8deb authored over 7 years ago
maq: update 0.7.1_1 bottle.

7ed9dd7e88d0290a56780dd8bac5da442c201e91 authored over 7 years ago
maq: fix compilation and cleanup formula

The perl dependencies are now provided directly
by perl 5.

Closes #6039.

Signed-off-by: Michka...

84b12d09c8fa3d6bd075a98149d8759949548757 authored over 7 years ago
anvio: update 2.4.0 bottle for Linuxbrew.

9ef4b205ba42f42c3184191d6b8749253007b30d authored over 7 years ago
anvio: update 2.4.0 bottle.

006359092258e45e3624f5f9e722c274fec608a9 authored over 7 years ago
anvio 2.4.0

Closes #6017.

Signed-off-by: Shaun Jackman <[email protected]>

3cdb88630e810503b2784e5930cc79ef4169ed60 authored over 7 years ago
netcdf: migrate to homebrew/core

Closes #6028.

Signed-off-by: FX Coudert <[email protected]>

9cdf6619c37937e547f506bea7d9a74ec5c7f38b authored over 7 years ago
cegma: update 2.5 bottle for Linuxbrew.

Closes #6072.
Signed-off-by: Shaun Jackman <[email protected]>

598050a11000ebe338a25f52431b89d9decd661e authored over 7 years ago
genewise: update 2.4.1_1 bottle for Linuxbrew.

Closes #6071.
Signed-off-by: Shaun Jackman <[email protected]>

6cb8a2519da261c703ca945daff48ca1a6c5c98e authored over 7 years ago
raxml: update 8.2.11_1 bottle for Linuxbrew.

54c5b51ec537d0338aca6cb736db8cf43ee0d821 authored over 7 years ago
raxml: revision for SSE3 fix

Closes #5943.

Signed-off-by: Jonathan Chang <[email protected]>

244169c116d37f9c13e02d07b38bbe3e110b55df authored over 7 years ago
raxml: update 8.2.11_1 bottle.

4c8e924674ee8b0d6ced226ef6310dc63d7e638c authored over 7 years ago
genewise: fix the problem with csh (#6069)

4a417e177a760011aee3829ad8a8eda50d86003f authored over 7 years ago
snpeff: update 4.3p bottle for Linuxbrew.

25136172655d9f3cb9f0e8d9d7a3d1afeb520819 authored over 7 years ago
snpeff: update 4.3p bottle.

e61c777b03b2a4187a95901f713ef5ccc9b8e620 authored over 7 years ago
snpeff 4.3p

Closes #6043.

Signed-off-by: Jonathan Chang <[email protected]>

9c653aa3e527b38b3a9039ed511c48e33f020d15 authored over 7 years ago
libbi: audit fix

3f3a34d8b1c3926eb78226becec7d80b73aeffcf authored over 7 years ago
libbi: update code style

c2b4fc53350b9ca5ed1979966403e22edf212b64 authored over 7 years ago
libbi: update 1.3.0_5 bottle for Linuxbrew.

22ce84181b3073cd701eb43248acdddad1d36636 authored over 7 years ago
libbi: update 1.3.0_5 bottle.

74d0b7b1bf7531afd1b8a2edaa7c08e187b029cd authored over 7 years ago
libbi: fix perl dependecies, remove failing test

Closes #6056.

Signed-off-by: Jonathan Chang <[email protected]>

22c92ca81c2040a594b6c672e7b0a1e58e5f293b authored over 7 years ago
genometools: update 1.5.10 bottle for Linuxbrew.

b5201985fc5e38d320c61d9ce882430812c34a78 authored over 7 years ago
genometools: update 1.5.10 bottle.

d0f4ffda7dbd3bb3158ec5d3ce75f0ad4bec08fe authored over 7 years ago
genometools 1.5.10

Closes #6068.

Signed-off-by: Jonathan Chang <[email protected]>

327a1cab2dc775a42912b9878964892ea986a2fd authored over 7 years ago
masurca: Depends on jellyfish bzip2 zlib on Linux

Closes #6065.

Signed-off-by: Shaun Jackman <[email protected]>

70dde4d129d9e82fad84d070acfc1a357355adc2 authored over 7 years ago
nextflow 0.25.5 (#6067)

d89c577888a777b4c1b083a7da231f4115d25e7e authored over 7 years ago
openimageio: update 1.7.16 bottle.

550c64cb1ed6282cd665e9915cacff311dd7eea4 authored over 7 years ago
openimageio 1.7.16

Closes #6062.

Signed-off-by: ilovezfs <[email protected]>

2ca9fc7843d91d2aed8b5d93a00135be53f4c02b authored over 7 years ago
opencollada: update 1.6.58 bottle for Linuxbrew.

56c8c53368a0050fd040eba9c2d77c5f53528d0f authored over 7 years ago
opencollada: update 1.6.58 bottle.

4c56e5ea029205b37a7b40f42f974f1580139e61 authored over 7 years ago
opencollada 1.6.58

Closes #6061.

Signed-off-by: ilovezfs <[email protected]>

46ee54506cd39b416fa1ccabc0c799f6cf5c405e authored over 7 years ago
ceres-solver: update 1.13.0 bottle.

5b9cd6d0523775441fb4db900e9cd634b4513f78 authored over 7 years ago
ceres-solver 1.13.0

Closes #6055.

Signed-off-by: ilovezfs <[email protected]>

872c1753ed01157d5bd253d23c20a8b25ff88894 authored over 7 years ago
ampl-mp: update 3.1.0_2 bottle for Linuxbrew.

5ced2831782aff6eb25bb122ef9188631f30e063 authored over 7 years ago
ampl-mp: update 3.1.0_2 bottle.

6968cde2883a9718531bee26be47c7b665bfc065 authored over 7 years ago
ampl-mp: head and missing headers

Closes #6060.

Signed-off-by: Dominique Orban <[email protected]>

135237b718733e70c9df618d2751a7ddde1fa901 authored over 7 years ago
prokka: Do not bump the revision

21ca990a825b80a31e6f5c6639e53494d7dc0331 authored over 7 years ago
prokka: Fix non-executable file in binaries/linux/

Closes #6059.

Signed-off-by: Shaun Jackman <[email protected]>

1bb6d2aa5bf748d9d0a3d0e0b420a575eaa62e01 authored over 7 years ago
parsnp: Depends on zlib for Linuxbrew

Use the brewed zlib rather than the host's.

Closes #6057.

Signed-off-by: Shaun Jackman <sjackm...

190d0d2dba6caa4ae31c8a4952e03824be489e1a authored over 7 years ago
kat: update 2.3.4 bottle for Linuxbrew.

f9438c79fb07871bb6fdc88dc6bb0733dda90993 authored over 7 years ago
kat: update 2.3.4 bottle.

57b6b8af825678a308c4f5b703186aa29b4c27b4 authored over 7 years ago
kat: Fails with gcc-5 on Linux

Dependency boost is compiled with the ABI of GCC 4.8.

Closes #6047.

Signed-off-by: Shaun Jackm...

db949c3ef88db85951b8f8347463b69a01ea2faa authored over 7 years ago
kat: Use the brewed matplotlib numpy scipy for Linuxbrew

884e4dd3b3e9b7861de7a02e60f05e2bf71cfc42 authored over 7 years ago
kat: Use python2 rather than python3

Fix Dependency should not use option with-python3

4118248175fbc05093b1461fbd98648b0053c334 authored over 7 years ago
fwdpp: update 0.5.6 bottle for Linuxbrew.

700c9093dde370a24c2aeac4b0f2d6f848c7bb63 authored over 7 years ago
fwdpp: update 0.5.6 bottle.

05c2896abf6902544b4e1b8eabf12185574d7802 authored over 7 years ago
fwdpp 0.5.6

Closes #6054.

Signed-off-by: Shaun Jackman <[email protected]>

8e7b1a050a983a7c166bdc5089fff1cf92fcfc33 authored over 7 years ago
phlawd: update 3.4b bottle for Linuxbrew.

c61354aeaff9ea71b297e0cee3ccbb960424d6cc authored over 7 years ago
phlawd: update 3.4b bottle.

21bb310faf1803a77aa61ea16c5db60cce441c34 authored over 7 years ago
phlawd 3.4b

Closes #6048.

Signed-off-by: Michka Popoff <[email protected]>

82eed7d8265f09c51de666771e603eb87f40752d authored over 7 years ago
itensor: update 2.1.0 bottle for Linuxbrew.

6b86db079929c52b97fbaebf72df13cb8c93c131 authored over 7 years ago
itensor: update 2.1.0 bottle.

4d51733a81b882391520a863bc20046ef17c90cb authored over 7 years ago
itensor 2.1.0

ITensor now has internal support for dynamic library building.

Closes #6051.

Signed-off-by: Mi...

37cf86bb3a728feb317e61836fa437e0fe060b74 authored over 7 years ago
trf: Bottle is unneded (#6052)

It installs only a single Perl file, so a bottle is unneeded.
The license does not permit redis...

0d5b2d742b3e3177e8ede4295c7e387d5c8c76a8 authored over 7 years ago
sratoolkit: update 2.8.2-2 bottle for Linuxbrew.

8ae5a099ee541e22e1d543de49af602dc0b83a75 authored over 7 years ago
sratoolkit: update 2.8.2-2 bottle.

04c1e5e2bb6481560add9ec72661aa04a160a523 authored over 7 years ago
sratoolkit 2.8.2-2

Closes #6049.

Signed-off-by: ilovezfs <[email protected]>

87411cbb1dcd38a822467e011400dbbb8689b83d authored over 7 years ago
scram: update 0.14.0 bottle.

62f647220f9e6b7ac70a3107614b78acc3216538 authored over 7 years ago
scram 0.14.0

Closes #6040.

Signed-off-by: Jonathan Chang <[email protected]>

b3b98eb3d4fa596c6dd964f113473c93ac005901 authored over 7 years ago
igraph: update 0.7.1_5 bottle.

afe4a6d24cde3cd4df3792e2bb6eefe82def16db authored over 7 years ago
igraph: update 0.7.1_5 bottle for Linuxbrew.

ef8bf028d6f6244e78d4f43efa9204a0cf56bbfc authored over 7 years ago
igraph: fix options error introduced in #6038

Closes #6046.

Signed-off-by: Jonathan Chang <[email protected]>

643c8aa93d7f00a4e29db4eabfa50d9558538d34 authored over 7 years ago
CONTRIBUTING: fix typo for openmp (#6023)

157ec95eb4ec06f331f63439f62f4e94a2801ae1 authored over 7 years ago
gnudatalanguage: remove deprecated hdf4 option

Closes #6044.

Signed-off-by: Michka Popoff <[email protected]>

75cceac50268048ea0176b106bdcaa75a3134528 authored over 7 years ago
megahit: update 1.1.2 bottle for Linuxbrew.

0106f8702cb8ee5091b4df0f32741cc7a2a60c4b authored over 7 years ago
megahit: update 1.1.2 bottle.

2e54b00828a1def36c95519f91192ad901a3d682 authored over 7 years ago
megahit 1.1.2

Closes #6045.

Signed-off-by: Michka Popoff <[email protected]>

a3464dbe50c6cc484d6ac1d8faa5672169805d30 authored over 7 years ago
openmeeg: update 2.4.prerelease_1 bottle.

3705ebbfe3c843679b2b1cf873c78ec54a5c0e03 authored over 7 years ago
openmeeg: update 2.4.prerelease_1 bottle for Linuxbrew.

9abbc281eb2832fd873e05c184362a9736c9cbc6 authored over 7 years ago
openmeeg: enable openmp

Closes #6022.

Signed-off-by: Michka Popoff <[email protected]>

d48562db9f1a0dc8fd8811cf6404b7e20bfb2c66 authored over 7 years ago
blast: Remove fails_with :gcc => "5"

Closes #5487.

Signed-off-by: Michka Popoff <[email protected]>

19baa797fc7ce1c413dd12f613452a03302c1649 authored over 7 years ago
mantaflow: update 0.11 bottle.

e9632564173219cd5da240dd54b53970c4662a25 authored over 7 years ago
mantaflow: update 0.11 bottle for Linuxbrew.

c1f90c1ad07d7dd8c49991525bec3376aca312a0 authored over 7 years ago
mantaflow 0.11

Closes #6035.

Signed-off-by: Michka Popoff <[email protected]>

8df8cf97fa09c835d8dab1c450c837f3bb57bb2e authored over 7 years ago
igv 2.3.98

Closes #6041.

Signed-off-by: Michka Popoff <[email protected]>

123007f82549484a18f45fe61108d7ca2ef42a0b authored over 7 years ago
igvtools: update 2.3.98 bottle for Linuxbrew.

7f685206a30cb7f97994e9f40e854ba7c04b52ba authored over 7 years ago
igvtools: update 2.3.98 bottle.

8dc200f6f785cd1f1481d49fdeb39ebc038bb02d authored over 7 years ago
igvtools 2.3.98

Closes #6042.

Signed-off-by: Michka Popoff <[email protected]>

63802c81620115bb65cf5c15ae614d5418f25d65 authored over 7 years ago
vcftools: update 0.1.15_1 bottle for Linuxbrew.

ef136a37385b9b3a5134c944f73540a92afbe081 authored over 7 years ago
vcftools: update 0.1.15_1 bottle.

4744d1754c81c6b34a8edda9dcbef20f40ca064c authored over 7 years ago
vcftools 0.1.15: fix installation path of perl modules

Closes #6036.

Signed-off-by: Michka Popoff <[email protected]>

a7cf2c8e00e33131767dd0cbe63d7f9747504c5a authored over 7 years ago
nextflow 0.25.4 (#6034)

d272ff0f00552fad69dc3aa435c2da5619c6b5ae authored over 7 years ago
igraph: update 0.7.1_4 bottle for Linuxbrew.

88283363ea699ff67fd622fa6bd2242fda8ca8f4 authored over 7 years ago
igraph: update 0.7.1_4 bottle.

1a02aa99b3b3c2e4bc7257ffa92acec79c56d709 authored over 7 years ago
igraph: add dependencies on libxml2 and openblas for Linuxbrew

Closes #6038.

Signed-off-by: Michka Popoff <[email protected]>

2ba90f6b673bd15b8455e2fc6a48fda39a06c448 authored over 7 years ago
bwa: update 0.7.16a bottle for Linuxbrew.

1e91a894472c8e582f8f85c81361266d426c18cd authored over 7 years ago
bwa: update 0.7.16a bottle.

7f0d6a2afe593d408f2dc62acddc2d6b608e9016 authored over 7 years ago
bwa 0.7.16a

Closes #6031.

Signed-off-by: ilovezfs <[email protected]>

864fe6233825bc9b40eae9d2fead6354cd258521 authored over 7 years ago
rmblast: fix version

3e766f830e3ad924737e93ab177b1ad9279805aa authored over 7 years ago
gmap-gsnap: fix version

22df64a997deb373a81ef0fd140d96e1a8543ca5 authored over 7 years ago