github.com/sagemath/homebrew-science commits | Ecosyste.ms: OpenCollective

ntcard: update 1.0.1 bottle for Linuxbrew.

6827b6eda7bb670996d88c49b96ed75f239b3206 authored over 7 years ago

ntcard: update 1.0.1 bottle.

8dd35183d363c3f631ace4a2c5f5a5846901a8ab authored over 7 years ago

ntcard 1.0.1

Closes #6358.

Signed-off-by: ilovezfs <[email protected]>

c1c89eb0c94086c21f5da640937e0ac30945e693 authored over 7 years ago

radx: update 20170920 bottle for Linuxbrew.

317fa8163a1958bf93c1a7c9d2e26a4b95a097d7 authored over 7 years ago

radx: update 20170920 bottle.

7b3f67e552fc5f0b5f509add4e02a9ede0348826 authored over 7 years ago

radx 20170920

Closes #6355.

Signed-off-by: ilovezfs <[email protected]>

9e3f54a291dfed44fe89e149aef1063f752f7405 authored over 7 years ago

bedops: update 2.4.29 bottle for Linuxbrew.

f4e4ca43c64a09a7c6248e375c67b8991858cd99 authored over 7 years ago

bedops: update 2.4.29 bottle.

ec92c9e02576f46ccd5111beaf60b37b0b199a52 authored over 7 years ago

bedops 2.4.29

Closes #6354.

Signed-off-by: ilovezfs <[email protected]>

99f99034b8a68c0877d59ce79359e0b75cae7355 authored over 7 years ago

igv 2.4.1 (#6351)

2b2288e71e55adc35173953588bd7c5c77ad12a0 authored over 7 years ago

.travis.yml: Sync with core

Mostly just package removals, but also use the new
Homebrew bin location.

Signed-off-by: Bob W....

64327c5a8f518b5a8c3a044311c7c944dd2a7e6f authored over 7 years ago

siril: update 0.9.7 bottle.

63d233661633c41e40a03dc67412936ce2b594ce authored over 7 years ago

siril 0.9.7

Closes #6328.

Signed-off-by: Michka Popoff <[email protected]>

74de443adcd5d2366d990b9ccac4dc3ec6feda79 authored over 7 years ago

fwdpp: update 0.5.7 bottle.

f76a521b56c7c3038ed4e8d5a00f5e8327aa056f authored over 7 years ago

fwdpp 0.5.7

Closes #6342.

Signed-off-by: ilovezfs <[email protected]>

7bc21ac8f979b0360e589db5040f0151b8a5c2eb authored over 7 years ago

bowtie2: migrate to homebrew/core (#6345)

73238055b677121fdc2ed0b91ecd31a1c6c224e6 authored over 7 years ago

abyss: migrate to homebrew-core (#6332)

c61be696bbf47ca278c1b17b2206dd7e6f4280f6 authored over 7 years ago

beast: migrate to homebrew/core (#6341)

ddea46783d02b4d9392d85dadbbd7102bea30c8b authored over 7 years ago

gubbins: update 2.3.1 bottle for Linuxbrew.

61dbbf33072ff9d980c9f0db1e63098ccef93660 authored over 7 years ago

gubbins: update 2.3.1 bottle.

7ea58a7b507ef3b52f36a9763ddf134f1d0ce1fb authored over 7 years ago

gubbins 2.3.1

Closes #6340.

Signed-off-by: ilovezfs <[email protected]>

17b4c9816e2a9a6fdfbfd9098c934f272e38991a authored over 7 years ago

mash: update 2.0 bottle for Linuxbrew.

0d1a4bcec5552a18226a1029d1d9948993ec16f8 authored over 7 years ago

mash: update 2.0 bottle.

838e9bbec850a0237995c6cf94c84d2efa877ba7 authored over 7 years ago

mash 2.0

Closes #6335.

Signed-off-by: ilovezfs <[email protected]>

0c4e7be9e0f0878d516411ee6297e99c6a3ef88a authored over 7 years ago

picard-tools 2.12.1 (#6337)

46e148de140ff17ca316dee38bd242a4225c28f1 authored over 7 years ago

orthofinder 1.1.10 (#6336)

3395918acc0f0f35bbed5938ebdbfea02ef6910f authored over 7 years ago

transdecoder: update 5.0.1 bottle.

4248d26f1e3b638dd9f3d71b1ca71b073e28de18 authored over 7 years ago

transdecoder 5.0.1

Closes #6338.

Signed-off-by: ilovezfs <[email protected]>

423739574724a9b574379fd60afd15ca19141909 authored over 7 years ago

gubbins: update 2.3.0 bottle for Linuxbrew.

d5a1fc98b57e42953ab97e4238d6be93573d8502 authored over 7 years ago

gubbins: update 2.3.0 bottle.

13fc6188ea5b801e01ba84b69772095dba819c8c authored over 7 years ago

gubbins 2.3.0

Closes #6333.

Signed-off-by: ilovezfs <[email protected]>

e43b94d93ae9f9bc862b04cb55a4ec4cfa012906 authored over 7 years ago

xraylib: update 3.3.0 bottle for Linuxbrew.

f9637cf5bc281ab75ab0ec418de9bfd0ef832433 authored over 7 years ago

xraylib: update 3.3.0 bottle.

eb2ecead8e7821d3e4134ec81650311228ea6a51 authored over 7 years ago

xraylib 3.3.0

Closes #6326.

Signed-off-by: ilovezfs <[email protected]>

47285cb69cf07ecefbc0d021ec998b365f56fa91 authored over 7 years ago

gdcm: update 2.8.2 bottle for Linuxbrew.

3c6dd94e5befb05f7d65771eea472e6dd72f0961 authored over 7 years ago

gdcm: update 2.8.2 bottle.

b06ad0055062a3c884bf2f8166bc347e30f37e89 authored over 7 years ago

updated gdcm.rb to version 2.8.2 (since the old version broke)

Closes #6325.

Signed-off-by: Michka Popoff <[email protected]>

b7ae67d8137160bcc30c379a07918afbabbd0210 authored over 7 years ago

cmor: update 3.2.7 bottle.

8f2014bf52af3dc34fc57d9ce74fe2e79c7c2c9c authored over 7 years ago

cmor 3.2.7

Closes #6319.

Signed-off-by: ilovezfs <[email protected]>

1848d03414da7d77102c1631b3fa5613c042f27f authored over 7 years ago

nonpareil: update 3.1 bottle for Linuxbrew.

a7949c2701dc87f6ddb61325250691c791a56664 authored over 7 years ago

nonpareil: update 3.1 bottle.

c993c9a50413d1dc32303613099af066b655c4f4 authored over 7 years ago

nonpareil 3.1

Closes #6324.

Signed-off-by: ilovezfs <[email protected]>

2542fa7d1fbb0cfe99a97c75c0aaabc220f21a93 authored over 7 years ago

gubbins: update 2.2.3 bottle for Linuxbrew.

b07c4c499e28fc8ac7d2aa83016eadb24ce229b3 authored over 7 years ago

gubbins: update 2.2.3 bottle.

29c609437a011a35c9caea6ab7f51e131d279e90 authored over 7 years ago

gubbins 2.2.3

Closes #6320.

Signed-off-by: ilovezfs <[email protected]>

1a7cb753006b2ac35a6f808f700011e27057f73e authored over 7 years ago

sga: update 0.10.15 bottle for Linuxbrew.

Closes #6270.
Signed-off-by: Shaun Jackman <[email protected]>

aa2bf226b16d3325a39344227440f9ae73a91b3f authored over 7 years ago

gatk: fix checksum

8224add3be584c649bede3dcf361a8e440474214 authored over 7 years ago

kallisto: fix checksum

cc4368a11269959be2c193a04afc05243143f1ca authored over 7 years ago

trinity: fix checksum

0e80703efa36156ae43c01cad92bd7bf5d570a55 authored over 7 years ago

circlator: fix checksum

44fc04aa2d42e0abf084832c80cc48eeda2980e7 authored over 7 years ago

trans_proteomic_pipeline: fix checksum

0591246c3f098acb5963cec20e9fcd78202773f0 authored over 7 years ago

osgearth: fix checksum

d8f4c4e54aae60d1b124a19f987b928064a8fd30 authored over 7 years ago

trilinos: fix checksum

82c32762e83ae6c550b2578be96614ea46858fea authored over 7 years ago

adapterremoval: fix checksum

fba4731bf66513350d45ed8c68716b8a123ef283 authored over 7 years ago

shark: update 3.1.4_2 bottle for Linuxbrew.

0e40aaf3f67c446a34255eaa8f64108a9e14dd43 authored over 7 years ago

shark: update 3.1.4_2 bottle.

cfa2d4a68b185f2cfa9b0e338df662f581c86132 authored over 7 years ago

shark: revision for boost 1.65.1

Closes #6310.

Signed-off-by: Jonathan Chang <[email protected]>

cecc405909a87850c1a419d130c4accf33e3ea8b authored over 7 years ago

alpscore: update 1.0.0_3 bottle for Linuxbrew.

d1063425dd61e30c44ab370091092e8fc12163ea authored over 7 years ago

alpscore: revision for boost 1.65.1

Closes #6297.

Signed-off-by: Jonathan Chang <[email protected]>

fec482144006ed8947307d071cf2a3bedf547cab authored over 7 years ago

alpscore: update 1.0.0_3 bottle.

5a9aec279a8a7ba39c9d4c32acd01f52eb8479e2 authored over 7 years ago

scram: update 0.15.0_1 bottle.

1630906cc88589807f8450fa1cb2e29891b5d36f authored over 7 years ago

scram: revision for boost 1.65.1

Closes #6313.

Signed-off-by: Jonathan Chang <[email protected]>

61caa81348ec75cd2f18cc031ab5f1067ab95270 authored over 7 years ago

rstudio-server: update 1.0.153 bottle.

6b537c80644f30f4312ff2bb6531d9d9f74a488d authored over 7 years ago

rstudio-server 1.0.153

rstudio-server: update to 1.0.153

Closes #6292.

Signed-off-by: Jonathan Chang <jchang641@gmail...

3152413eec51d932c4971042dba6799b10ed76b9 authored over 7 years ago

discovar: fix a test block (#6282)

77ab03e9c0b777b86fda98217392c5b5775ee8e0 authored over 7 years ago

tophat: update 2.1.1_6 bottle for Linuxbrew.

01c34cbc3f671d4792201404f70bc15bee87057c authored over 7 years ago

tophat: update 2.1.1_6 bottle.

f23f11d920e900245cf352f41a5e295c06a3c7c3 authored over 7 years ago

tophat: revision for boost 1.65.1

Closes #6311.

Signed-off-by: Michka Popoff <[email protected]>

67f3f088a95e2c28ca604c14bd4201c1c982069e authored over 7 years ago

mothur: update 1.39.5_2 bottle for Linuxbrew.

e14c7490dfd8a87f83f7a5b4f1759e262fb1adf7 authored over 7 years ago

mothur: update 1.39.5_2 bottle.

f99fc783858386d5e1d36c57b6f44cd22e8d5405 authored over 7 years ago

mothur: revision for boost 1.65.1

Closes #6308.

Signed-off-by: Michka Popoff <[email protected]>

f2a3a88056d70735f6b2599396cc484a4bb18c4b authored over 7 years ago

lightstringgraph: update 0.4.0_3 bottle for Linuxbrew.

2c63f8a3f281b7b1d0990891821f1250b8446d49 authored over 7 years ago

lightstringgraph: update 0.4.0_3 bottle.

700cc8abcd99aa784e7563bddca2d243e3ae248c authored over 7 years ago

lightstringgraph: revision for boost 1.65.1

Closes #6307.

Signed-off-by: Michka Popoff <[email protected]>

f8794201242e0515159f6dc520317611ec3beb04 authored over 7 years ago

express: update 1.5.1_9 bottle for Linuxbrew.

764b9e6bbc8491798232332c02877b39cbd545e8 authored over 7 years ago

express: update 1.5.1_9 bottle.

12c5dcb5f0ac13281349081263ac71ca223735bc authored over 7 years ago

express: revision for boost 1.65.1

Closes #6305.

Signed-off-by: Michka Popoff <[email protected]>

f175153ff7c38ed39c277c09c375f88eed286df1 authored over 7 years ago

delly: update 0.7.7_3 bottle for Linuxbrew.

ae7fd2f9a5c26d565652e88d8385bb8c24b84525 authored over 7 years ago

delly: update 0.7.7_3 bottle.

4b7d76ecb9ef94e19b95819779cf6c273103a8bd authored over 7 years ago

delly: revision for boost 1.65.1

Closes #6304.

Signed-off-by: Michka Popoff <[email protected]>

3e78928786a321d032fb11947d019534eb97bfd9 authored over 7 years ago

cufflinks: update 2.2.1_3 bottle for Linuxbrew.

c0b50ffd31e60eb6f46195c98c4ae941a8b9dd2b authored over 7 years ago

cufflinks: update 2.2.1_3 bottle.

6adde4bf0a05dd520a6817b099a17900cef2fd07 authored over 7 years ago

cufflinks: revision for boost 1.65.1

Closes #6303.

Signed-off-by: Michka Popoff <[email protected]>

fca70a2f4cf6fc6c7c431549dda91f5ebad56e08 authored over 7 years ago

bless: update 0.24_4 bottle for Linuxbrew.

638c39fb93b2be7035a56a56d85e387b73f16081 authored over 7 years ago

bless: update 0.24_4 bottle.

da12573d079d31222235c45891989e61a37dbb44 authored over 7 years ago

bless: revision for boost 1.65.1

Closes #6301.

Signed-off-by: Michka Popoff <[email protected]>

85579eb1e26ae996f4313e5f235eb2f434017a76 authored over 7 years ago

ckon: update 0.7.1_5 bottle for Linuxbrew.

79a1381a6d53536624c675c8d77d88c240811db2 authored over 7 years ago

ckon: update 0.7.1_5 bottle.

ed24faaf9e417f3d5d288891f6491856e1a2b9bd authored over 7 years ago

ckon: revision for boost 1.65.1

Closes #6302.

Signed-off-by: Michka Popoff <[email protected]>

36770f3c6f587259e198395377c13064e3de3372 authored over 7 years ago

augustus: update 3.2.2_4 bottle for Linuxbrew.

f09b75ea9240071a2b7536b28fb292f945d4a88d authored over 7 years ago

augustus: update 3.2.2_4 bottle.

0d7b320917f8dda20cb26f7ec09784ecd04048e2 authored over 7 years ago

augustus: revision for boost 1.65.1

Closes #6298.

Signed-off-by: Michka Popoff <[email protected]>

b8cf9848e8227e91fb34c1e0fd351d5dbd08c896 authored over 7 years ago

fplll: update 5.2.0 bottle for Linuxbrew.

a7641cba7ecc72ae8dc26a7ae0fe5af8254f3e1d authored over 7 years ago

sollya: update 6.0_2 bottle for Linuxbrew.

90e158373d4c21bff253eacac509600a4f49bd43 authored over 7 years ago

sollya: update 6.0_2 bottle.

5b8c51552034b57180141795a06de9a4d1743449 authored over 7 years ago

fplll: update 5.2.0 bottle.

a943a2f764bc925aea625f3c2dd4072fd8f0219e authored over 7 years ago

fplll 5.2.0

f11d57ff72953e0a5c62805d9662c205af3a0a5d authored over 7 years ago

sollya: revision for fplll

Closes #6299.

Signed-off-by: ilovezfs <[email protected]>

d70224f7a2a948cf7d50aca682b062eef46b9acd authored over 7 years ago

picard-tools 2.12.0 (#6295)

736a7f87478d371df0c24e2f55db553d93aa6c44 authored over 7 years ago

boost-compute: update 1.65.1 bottle.

58b4fa5345a253ca43179cfb09f6440362617972 authored over 7 years ago