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github.com/sagemath/sage-archive-2023-02-01

This repository used to be the user-facing mirror of the Sage source tree. As Sage development migrated on 2023-02-01 from https://trac.sagemath.org/ to our new repository on GitHub, https://github.com/sagemath/sage, we have renamed and archived this repository.
https://github.com/sagemath/sage-archive-2023-02-01

latex for elements of quotient rings

56ee208e59725b45e06d4d0f0bd0e90811e03664 authored over 2 years ago by Frédéric Chapoton <[email protected]>
various details about typing in combinat

7eb6ebc47b27dd8fe0f329eab95498c850a9c6f6 authored over 2 years ago by Frédéric Chapoton <[email protected]>
fix pycodestyle E306 in geometry and schemes

e49f0d2a90d870423c2ba78dc6b17fe6955389ab authored over 2 years ago by Frédéric Chapoton <[email protected]>
Add some methods to projective morphisms

e8db5419f184e0f36c1b0f648e71c1e79d2f72de authored over 2 years ago by Kwankyu Lee <[email protected]>
Add free resolutions

59226b1d799b971de9a535f4b51ed124597e713b authored over 2 years ago by Kwankyu Lee <[email protected]>
some pep fixes for E7 in pxd files

88e71c553a6e7579a4d66fd4cf5a2d4f44193db2 authored over 2 years ago by Frédéric Chapoton <[email protected]>
some pep fixes in pxi files

017c3a28645dc708f4187fa5debf56e012f416d0 authored over 2 years ago by Frédéric Chapoton <[email protected]>
get rid of commented-out old-style print

00ef03f93178000daaf7f108d55b9bbfac811a33 authored over 2 years ago by Frédéric Chapoton <[email protected]>
src/doc/en/developer/coding_basics.rst: No more dollar signs for math

63135495551c8cde3b267baa95f6c65c9071c78c authored over 2 years ago by Matthias Koeppe <[email protected]>
src/sage/misc/sagedoc.py (process_dollars): Emit deprecation warnings

13eced813040aab0eed0a440b9ed961c0850f492 authored over 2 years ago by Matthias Koeppe <[email protected]>
trac 33963: fix legendre polynomial

a3608a41a27c55eed9de19c40fb85c9c84db32db authored over 2 years ago by Dave Witte Morris <[email protected]>
reviewer corrections

8131256c2145a5645e0bb5cf33cf4eff330d0320 authored over 2 years ago by Dave Witte Morris <[email protected]>
trac 33968: more changes

afa5bed0f784d25343cbf9c95a680e5af1a3a61c authored over 2 years ago by John H. Palmieri <[email protected]>
Reviewer fixes to docstrings

8e34f345233af19473f8b52afde5a398b5f08efc authored over 2 years ago by Matthias Koeppe <[email protected]>
faster 2-adic lifting for square roots modulo 2^n

aa06a211bd923aeb7ebc51b7de088a1e224646b4 authored over 2 years ago by Lorenz Panny <[email protected]>
Remove a period sneaked in

3b2311ae275505f9243a64251de9d7ec8b796753 authored over 2 years ago by Kwankyu Lee <[email protected]>
33969: initial

b899290da35e3bbff8318293dbe0d43dac6b8709 authored over 2 years ago by Sebastian <[email protected]>
sage.rings: Replace $...$ in docstrings by `...`

b215c7e23bce4166d936c9dc8aec04959fde3e00 authored over 2 years ago by Matthias Koeppe <[email protected]>
sage.schemes: Replace $...$ in docstrings by `...`

8cfdab1e449b441d0bc957aa835e2a89508958b7 authored over 2 years ago by Matthias Koeppe <[email protected]>
src/sage/algebras/steenrod/steenrod_algebra_mult.py: Replace $...$ in docstrings by `...` (fixup)

cdb74b4273d3241bc62b00f1ea60049b52d7bfe0 authored over 2 years ago by Matthias Koeppe <[email protected]>
sage.structure: Replace $...$ in docstrings by `...`

73ce3e33e2a092bb16df2def931e3f60a8d30102 authored over 2 years ago by Matthias Koeppe <[email protected]>
sage.symbolic: Replace $...$ in docstrings by `...`

9715f3fdb67a629a0ebd6ad245727d9c925e8067 authored over 2 years ago by Matthias Koeppe <[email protected]>
sage.topology: Replace $...$ in docstrings by `...`

03895c086ca74afd2156051c6785d40b6109a606 authored over 2 years ago by Matthias Koeppe <[email protected]>
sage.geometry: Replace $...$ in docstrings by `...`

f0f707b3c364cd2f64a530e56ca899deed18d4f1 authored over 2 years ago by Matthias Koeppe <[email protected]>
sage.categories, coding, databases: Replace $...$ in docstrings by `...`

6e2d614510ae0c2236f041fbf0e3e0c4d1e5905d authored over 2 years ago by Matthias Koeppe <[email protected]>
sage.calculus: Replace $...$ in docstrings by `...`

7b6016f23cebfc749932b95945cbcf7fac7ee114 authored over 2 years ago by Matthias Koeppe <[email protected]>
sage.algebras: Replace $...$ in docstrings by `...`

4c0e7d75dbf60a415134689e9bd62c1e91042335 authored over 2 years ago by Matthias Koeppe <[email protected]>
Fixing bad link in permutation.py.

94d9d75d07444fac858d9954992ccc89e6bcb349 authored over 2 years ago by Travis Scrimshaw <[email protected]>
Merge branch 'public/combinat/schubert_shenanigans-23443' of https://github.com/sagemath/sagetrac-mirror into public/combinat/schubert_shenanigans-23443

1417ff67f1229071d99484f5f37a5e1a342d66da authored over 2 years ago by Travis Scrimshaw <[email protected]>
src/sage/doctest/control.py: Show SAGE_LOCAL, SAGE_VENV

f2468abaa1275cf58dd1ad5cafd111478d0df5ba authored over 2 years ago by Matthias Koeppe <[email protected]>
src/sage/doctest/control.py: Show also 'git describe --always --dirty'

d242f96d3302bb9124dd5dc345e80b76e2f3caa3 authored over 2 years ago by Matthias Koeppe <[email protected]>
foo

4ae68cc3cf82ab8d3ce5676044fae0fbfe3f8f38 authored over 2 years ago by Matthias Koeppe <[email protected]>
Mark tests using runtime Cython # optional - sage.misc.cython

1440273c80c8fd6da5e97a62bc0be0af6881b4b3 authored over 2 years ago by Matthias Koeppe <[email protected]>
src/sage/misc/inherit_comparison.pyx: Mark doctests using cython # optional - sage.misc.cython

9356cb926b5593a6a53bbac2ec97acdfde75ed62 authored over 2 years ago by Matthias Koeppe <[email protected]>
src/sage/features/cython.py: New

a1154c064b60e39dfbddae0ee9c373691c91eb12 authored over 2 years ago by Matthias Koeppe <[email protected]>
build/pkgs/networkx: Update to 2.8.3

cad42bf89d3f926e90a8e584057d97dc82a37d1a authored over 2 years ago by Matthias Koeppe <[email protected]>
Merge tag '9.7.beta1' into t/32423/update_numpy_to_1_22_x__scipy_1_8_x___requires_dropping_python_3_7

SageMath version 9.7.beta1, Release Date: 2022-05-26

b05303971b9298de58883e274befda3a3bc8c0ba authored over 2 years ago by Matthias Koeppe <[email protected]>
Merge #28925

56e9123118b11e7ada5c8d12b39f1dc811b6b015 authored over 2 years ago by Matthias Koeppe <[email protected]>
src/sage_setup/command/sage_build_cython.py: Reduce verbosity

39272c1c5c8e33072f29a80baea95af40f7f6ad1 authored over 2 years ago by Matthias Koeppe <[email protected]>
Merge branch 'khovanov_poly_33965' into more_poly_invar_knotinfo

00357b1844dedfb5ae019c78367e691a75f217b2 authored over 2 years ago by Sebastian <[email protected]>
33966: initial

99345e14d8182d09ac8da35a53af78964d77c2e8 authored over 2 years ago by Sebastian <[email protected]>
Rename to Module_free_ambient and fix doctests

9f12e3241ffe3d77a98cc5b514e7efd60be17f84 authored over 2 years ago by Kwankyu Lee <[email protected]>
A fix to cooperate with matrix infrastructure

c4e89b982fc945861fe59f26beb07f9cb6327889 authored over 2 years ago by Kwankyu Lee <[email protected]>
Add coercion map from a submodule to the free module

fcb51da28924880a1147563b42099f0ea9603602 authored over 2 years ago by Kwankyu Lee <[email protected]>
33965: small fix in docstring

d6bf7a06eb15788636df3d9772b5bb57d22b1502 authored over 2 years ago by Sebastian <[email protected]>
33965: initial

975f28a911fa54085a339255944527923453ac19 authored over 2 years ago by Sebastian <[email protected]>
Refactor FreeModule_generic

b2870da6195ad36ac9131b15399338120a8d4546 authored over 2 years ago by Kwankyu Lee <[email protected]>
more efficient algorithm for square roots modulo 2^n

0b6382da3b8714b10c48f1ce55ba2ff0f55e7623 authored over 2 years ago by Lorenz Panny <[email protected]>
trac 33962: fix legendre polynomial

c0114095a3706112f5bda36fa5b6a50ce97b9c94 authored over 2 years ago by Dave Witte Morris <[email protected]>
src/sage_setup/find.py: Update doctest output

bba52849ad01f2977e1cc6b7a33342771a8671e0 authored over 2 years ago by Matthias Koeppe <[email protected]>
Remove __init__.py files, add some all.py files

1f45f8a5634b042a5cdb7081095c281dc2d522c1 authored over 2 years ago by Matthias Koeppe <[email protected]>
src/sage_docbuild/builders.py: Handle namespace packages

5aebcf338fb09db6dcc876cfd9048e8af218db61 authored over 2 years ago by Matthias Koeppe <[email protected]>
src/sage/numerical/__init__.py: Remove

1326e173dfd625a3c65c763e213413f59e9c85cc authored over 2 years ago by Matthias Koeppe <[email protected]>
Remove __init__.py files

895abe0b7c17b7fc1dc4ba26e8854febd050ac12 authored over 2 years ago by Matthias Koeppe <[email protected]>
src/sage/__init__.py: Restore

f9038edc8259788e3693acec278393f821edb9dd authored over 2 years ago by Matthias Koeppe <[email protected]>
pkgs/sagemath-objects/setup.py: Monkey-patching cython is now done by the sage_build_cython command

79822e41a32907476352becb078e10f921c0eba9 authored over 2 years ago by Matthias Koeppe <[email protected]>
src/setup.py: Fix up use of cython_namespace_package_support

7c98c36386a268740def9e93bbb340d3c1dfe5c6 authored over 2 years ago by Matthias Koeppe <[email protected]>
src/sage/misc/package_dir.py: New context manager cython_namespace_package_support

8587d4715af8448ea283750a99a39b44dbed93de authored over 2 years ago by Matthias Koeppe <[email protected]>
src/sage/misc/cython.py: Activate cython_namespace_package_support

bc0992d36b482cd42fe28f6ee1a4c81d7eec194c authored over 2 years ago by Matthias Koeppe <[email protected]>
pkgs/sagemath-categories/tox.ini: Fix instructions in comment

a15f173f8e75f3e53d46fd44d01165dae9a0f1af authored over 2 years ago by Matthias Koeppe <[email protected]>
adding interface to Pari L-function for genus 2 curves

0f5876a1234d0465abdeb87a1384f5b023a010db authored over 2 years ago by Frédéric Chapoton <[email protected]>
Trac #33865: direct computation of .formal()[1] for elliptic-curve morphisms

Follow-up to #33216: We can compute `.formal()[1]` directly, i.e.,
without going through `.forma...

b95c1659af1d26926ddf421d28b2d1f76dbc4810 authored over 2 years ago by Release Manager <[email protected]>
Trac #33244: sage.arith.misc.power_mod() works in any ring with %, not just ZZ

The documentation of `power_mod()` in `sage/arith/misc.py` currently
says:

Return the `n`-t...

f0068fad2559fa74ea2381d756575fd2fc14ac05 authored over 2 years ago by Release Manager <[email protected]>
Trac #15426: Performance of casting ZZ[x] to Qp[x]

One probably expects that casting ZZ[x] to Qp[x] is at least as fast as
casting QQ[x] to Q[x].
T...

9de47303c2d814eb35a017dd78b71031a9ab42da authored over 2 years ago by Release Manager <[email protected]>
Trac #33959: some improvements in sandpile.py

We try to avoid as much as possible operations like
`[g.vertices().index(v) for v in g.vertices(...

93619a48357eb1d35a2071cab3e372414aab0248 authored over 2 years ago by Release Manager <[email protected]>
Trac #33958: cleaning two files in graphs/

fixing a bunch of pycodestyle details

and also some lgtm recommendations

URL: https://trac.sag...

d31947813bbbe1f9d1b7f0c99a4f726e2eb962a4 authored over 2 years ago by Release Manager <[email protected]>
Trac #33954: partial pep cleanup for sandpile.py

URL: https://trac.sagemath.org/33954
Reported by: chapoton
Ticket author(s): Frédéric Chapoton
R...

f8cb451fb63ed15dcf132f66fc28eeb20b78e1c4 authored over 2 years ago by Release Manager <[email protected]>
Trac #33948: fix pycodestyle E306 in all pyx files

namely:

empty line before nested def

URL: https://trac.sagemath.org/33948
Reported by: chapoto...

2ae859211b8b2bb2e83e90f6746fc6c41b641fec authored over 2 years ago by Release Manager <[email protected]>
Trac #33944: saving a tikzpicture to a local folder is now broken

Now that temporary files are created in the `/tmp` folder (after
#33797), the following is now b...

93c1512579ae53a9a0e1cfa8b41305054d2dda4c authored over 2 years ago by Release Manager <[email protected]>
Trac #33943: 1 doctest failing in oeis.py

On Ubuntu 20.04 + `SageMath version 9.7.beta1, Release Date: 2022-05-26
`, the command

{{{
sage...

b99762ba0cee76f4749836006a35b9f30f85236e authored over 2 years ago by Release Manager <[email protected]>
Trac #33937: finite-field .extension() sets up wrong coercion

Failing example:

{{{#!sage
K.<u> = GF(23^4)
L.<v> = K.extension(5)
assert L(u).minpoly() == u.m...

7280939142ddd58a93a81e623bc6dc0a717db763 authored over 2 years ago by Release Manager <[email protected]>
Trac #33935: simplify some super(something) to super() outside of combinat

see #33934 for the combinat case

URL: https://trac.sagemath.org/33935
Reported by: chapoton
Tic...

fed1e4e89afac706d803fca5de9c1921b037f7ee authored over 2 years ago by Release Manager <[email protected]>
Trac #33934: simplify some super(something) to super() inside combinat/

here in the files with many occurrences

URL: https://trac.sagemath.org/33934
Reported by: chapo...

1ffc363fae61ad954c9c0882da4ef03f07dd2626 authored over 2 years ago by Release Manager <[email protected]>
Trac #33913: FPLLL 5.4.2 and FPyLLL 0.5.7

New versions of FP(y)LLL that should work with Python 3.11

URL: https://trac.sagemath.org/33913...

c7e0784afe9e07a452c4e11c1824e0f8b41a2731 authored over 2 years ago by Release Manager <[email protected]>
Trac #33885: Reference undefined - pdf documentation

For `9.7.beta0` when building the pdf documentation I have
{{{
Latexmk: List of undefined refs a...

1551d4fa23647c0feb820b4b45a5fb28cc5aac49 authored over 2 years ago by Release Manager <[email protected]>
Trac #33879: Run pytest on github workflow for pytest related tickets

We run pytest for doctests in the build & test github workflow for
branches that contain "pytest...

06efaa3178fbe095cbc7dea2a04c551321620ac7 authored over 2 years ago by Release Manager <[email protected]>
Trac #33822: python3 spkg-configure.m4: Require ensurepip

On Debian, package `python3-venv` needs to be installed to un-sabotage
python3.

Needed in #3381...

df2124f23771a0cbe1736e11edf5c6345eb75682 authored over 2 years ago by Release Manager <[email protected]>
Trac #33745: Create direct sum of matroids

Make the direct sum of matroids more accessible to users via a
`Matroid.direct_sum()` method.

U...

96a04a85fe553ce216e0ac5ef7d3314121f6f64a authored over 2 years ago by Release Manager <[email protected]>
Trac #32072: trace of zero fails in padic extensions

Taking trace of O(p^prec) in p-adic extensions fails:

Eisenstein extension:

{{{
sage: F=Qp(2)
...

4c932d04a34c066bf38fe9c97fefb7946f32b4d2 authored over 2 years ago by Release Manager <[email protected]>
Trac #29941: Modularization of sagelib: Break out separate packages sagemath-environment, sagemath-repl

The distribution '''sagemath-environment''' has no dependencies and
contains:
- `sage.env`
- `...

8d796b6441aaa2cabf1326ea8c24b7f55b415a1e authored over 2 years ago by Release Manager <[email protected]>
Trac #24949: Bug in p-adic expansion over ramified extensions

{{{
sage: R.<a> = Zp(2).extension(x^10 + 2)
sage: x = R(a^4 + a^5)
sage: y = R(a^2 + a^3)
sage: ...

f112639e6d37afb79c647ad0c7d82323e3901d3c authored over 2 years ago by Release Manager <[email protected]>
Trac #23575: Geometric Frobenius is broken

#12657 introduced an error in the computation of the geometric
Frobenius, uncaught since there a...

da5e1ac57db0ddd0cd3c4508d0d5252977b8e0ca authored over 2 years ago by Release Manager <[email protected]>
Trac #33933: Remove quickref and tutorial from sage.combinat.all

There is no reason for quickref and tutorial to be in the global
namespace. All we need is to be...

67e08a3876d8f935b51d04e3eb235490ab122dba authored over 2 years ago by Release Manager <[email protected]>
trac #33959: another change

ddda2f46316b586aff6fdce5b4b43eaa56184e76 authored over 2 years ago by dcoudert <[email protected]>
trac #33959: some care in sandpile.py

905a6bb15b1e8e41b074e35658df397902bc9e75 authored over 2 years ago by dcoudert <[email protected]>
cleaning two files in graphs/

52f47a0b44da91a394a66602efbffa10d617d93f authored over 2 years ago by Frédéric Chapoton <[email protected]>
a few more tweaks in nu-Tamari

8de8827ed0fd5a864c9e0b99da7016be8cf4e279 authored over 2 years ago by Frédéric Chapoton <[email protected]>
Merge branch 'public/ticket-nu-tamari' in 9.7.b1

ec42ae370e43b77641b38c9e354e93b6634d819f authored over 2 years ago by Frédéric Chapoton <[email protected]>
a few more changes in sandpile

eb8340ec7fdfb6a87c161c350a0eef372037fb79 authored over 2 years ago by Frédéric Chapoton <[email protected]>
src/bin/sage-runtests --help: Say that ! needs to be quoted

ba86146e5a5e3308026aac49d87d2716a80c6a93 authored over 2 years ago by Matthias Koeppe <[email protected]>
sage -t: Handle --optional=!FEATURE

b1ce8d6cb361701b388e3c2c3be7e1c831ee85ff authored over 2 years ago by Matthias Koeppe <[email protected]>
src/bin/sage-runtests: Update documentation of --optional

a670ae8ac34dff7c29f84744463a1c4aeb6892d4 authored over 2 years ago by Matthias Koeppe <[email protected]>
some better .join with no list inside

aa7d2e4cad01772483add28e3e6c884809b4e9ee authored over 2 years ago by Frédéric Chapoton <[email protected]>
partial pep cleaning of sandpiles/sandpile

0adf8cb96be21d41da5dc02eedb61178319f1a4e authored over 2 years ago by Frédéric Chapoton <[email protected]>
Add methods for holomorphic differentials

05e35abed4918645157052a15846eae9cf295ed4 authored over 2 years ago by Kwankyu Lee <[email protected]>
trac #33854: set positions

b9645b28c2a4809f5153f3e9bffa1ccbe763a7be authored over 2 years ago by dcoudert <[email protected]>
get rid of "have_ring" in singular interface

8dc327a72bde1a0d20cd69fce80953bde13b7edc authored over 2 years ago by Frédéric Chapoton <[email protected]>
be more strict with conversion between padics

c5088e601fbb9b9f995ad713979e3ce4066c23cd authored over 2 years ago by Xavier Caruso <[email protected]>
fix pycodestyle E306 in all pyx files

257b7b5b92d6a289102ee68a6073953268d0cbd2 authored over 2 years ago by Frédéric Chapoton <[email protected]>
src/sage/modular/overconvergent/hecke_series.py: fix failing doctests

56d0e0eb4677bfe03524f0bfb5bf3d5eaba3a4a5 authored over 2 years ago by DavidAyotte <[email protected]>