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github.com/sagemath/sage

Main repository of SageMath
https://github.com/sagemath/sage

build/bin/write-dockerfile.sh: skip packages without spkg-configure.m4

We can't add --with-system-foo if foo doesn't have an
spkg-configure.m4 file.

5eafbaa04ffc858c1e1a714c3b8dff8ceffe41e9 authored over 1 year ago by Michael Orlitzky <[email protected]>
build/bin/write-dockerfile.sh: don't mention --enable-system-site-packages

Since this script can be invoked outside of a sage environment, we
mention the environment varia...

1c1000ad85b49195471f4922ccc02264cc6131e7 authored over 1 year ago by Michael Orlitzky <[email protected]>
add optional sirocco

a65c6f891975fe8b10e9cd01be5a1a9c9e3ce9c9 authored over 1 year ago by Enrique Artal <[email protected]>
lb version in install-requires.txt for flit

f8f6a80613799bdf85ac0d4fb227d00314dea790 authored over 1 year ago by Dima Pasechnik <[email protected]>
check for random parallel error

012c98a3bf75e8745b9b70de8b9e27bd010d154e authored over 1 year ago by Enrique Artal <[email protected]>
review comment

f4609f6cee4041abe4abf4cdc7e633d21b5ef938 authored over 1 year ago by dcoudert <[email protected]>
build/bin/write-dockerfile.sh: refactor using sage-get-system-packages

This avoids duplicating the check for ENABLE_SYSTEM_SITE_PACKAGES.

d2360b3b7a06991be6ec5b90d1172a39637a634a authored over 1 year ago by Michael Orlitzky <[email protected]>
gh-36140: python-style loops in `partn_ref.data_structures` (partial) + some pep8

This converts some loops to the python style.

Plus a few pep8 details fixed

### :memo: Checkli...

b1ba78aff8355d0e4fc4cdea6ec08a521303e327 authored over 1 year ago by Release Manager <[email protected]>
build/bin/sage-get-system-packages: optionally skip python packages

Packages calling SAGE_PYTHON_PACKAGE_CHECK in spkg-configure.m4 are
python packages whose detect...

174def6e458e69b9e22ab47b929e8164be46a750 authored over 1 year ago by Michael Orlitzky <[email protected]>
build/bin/sage-build-env-config.in: export ENABLE_SYSTEM_SITE_PACKAGES

This variable is set in configure.ac when --enable-system-site-packages
was passed to ./configur...

b68a4d55aa115773957cb2e37639fcd9afba2b99 authored over 1 year ago by Michael Orlitzky <[email protected]>
configure.ac: set/subst a variable for --enable-system-site-packages

We now set ENABLE_SYSTEM_SITE_PACKAGES=yes and call AC_SUBST on it
when --enable-system-site-pac...

0f07a78e6472b19c9436669376653264e2cccb1e authored over 1 year ago by Michael Orlitzky <[email protected]>
gh-36132: Delete .zenodo.json


this is a leftover from #35666 which was somehow created during a messy
manual merge.

This ...

c42a5e80b77cbcc111c489721841687c908065fb authored over 1 year ago by Release Manager <[email protected]>
gh-36124: fix cardinality, #36119, #36118, #36116


* Fix a thinko in the iterator for TSSCPP
* make plane partitions hashable
* avoid rational ...

e38fc5dbec8807a23c90e3f3ef52ab43f556c50d authored over 1 year ago by Release Manager <[email protected]>
gh-36114: using `# needs` in posets folder


using the `needs` directive in `posets` folder

### :memo: Checklist

- [x] The title is con...

1e6119e84042a8524817c3f75ee3d22589f2b672 authored over 1 year ago by Release Manager <[email protected]>
gh-36108: some details in quadratic forms


This is fixing a few minor details in quadratic forms, about

- unused variables found by py...

3c6a36aac0f009f33f26b423c38d37005e6f8ea9 authored over 1 year ago by Release Manager <[email protected]>
gh-36107: using mute variables in combinat


taking care of unused variables found by `pylint` in combinat

### :memo: Checklist

- [x] T...

34c505e5f6e85adb3ed782d26d50a666d4737c98 authored over 1 year ago by Release Manager <[email protected]>
gh-36106: `sage.crypto`: Update `# needs`, modularization fixes


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300fd193f2d3aa4a4ee13d8cd95010dc8ba23b94 authored over 1 year ago by Release Manager <[email protected]>
gh-36103: upgrade msolve to 0.5.0, update interface


- upgrade msolve to 0.5.0
- add support for Gröbner bases over ℚ to the msolve interface

Fi...

ce7457f01c4e36f72cbf4e89fe02a08c37f257ce authored over 1 year ago by Release Manager <[email protected]>
gh-36098: Detect and use system MathJax-3.x


Resolves #30296

URL: https://github.com/sagemath/sage/pull/36098
Reported by: Michael O...

a3e6bb2eabafcc76042be76a45aec427e9b84280 authored over 1 year ago by Release Manager <[email protected]>
gh-36097: Add additional bindings from NTL to `Polynomial_ZZ_pEX`


There are current cython bindings to NTL methods which are not made
available to polynomial ...

48ef6dfad2651993002a716aa70d06fa3a100096 authored over 1 year ago by Release Manager <[email protected]>
gh-36096: add ordered set partitions as supported findstat collection


findstat.org supports a new collection, ordered set partitions. This
has to be reflected by...

53e8cbbe749303d5584c2b1d3e4118c39851d280 authored over 1 year ago by Release Manager <[email protected]>
gh-36094: Height function for projective subvarieties


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727a619f3695eb4c4ec9efc56737f0cbdd915b7b authored over 1 year ago by Release Manager <[email protected]>
gh-36089: `sage.geometry.polyhedron`: fix doctest error due to modularization


On MacOS with sagemath 10.1.rc0, I have the following doctest error in
`src/sage/geometry/po...

159a6f98f365c4bdfee456c18232c5e3ea598eba authored over 1 year ago by Release Manager <[email protected]>
gh-36087: using python-style for loops in calculus


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4d1a39201964661497463320108fb8cb09872c4d authored over 1 year ago by Release Manager <[email protected]>
gh-36086: using python-style for-loops in modular folder


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92114110a8214c6d8b301364a00433d6968cdfd7 authored over 1 year ago by Release Manager <[email protected]>
gh-36085: some details in coxeter groups


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f6af55cc2e21127c7687cb918271652e9c4ed5f9 authored over 1 year ago by Release Manager <[email protected]>
gh-36083: build/pkgs/jupyter_core: Update to 4.12.0


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45f69ffd0728cd363af60ff7a3eb18d0f637e3d4 authored over 1 year ago by Release Manager <[email protected]>
gh-36079: fix and activate pycodestyle E301 in pyx files


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f8b07e7d4daa7e27759b1ca6857ba94a4fe54561 authored over 1 year ago by Release Manager <[email protected]>
gh-36078: `sage.{interacts,misc,repl,typeset}`: Update `# needs`, modularization fixes


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78852165e2104bff4b7841190c488027642e4308 authored over 1 year ago by Release Manager <[email protected]>
gh-36071: Correct typo in class name of `Polynomial_ZZ_pEX` in `.pxd` file


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Corrects a typo in the cython definition of Polynomial_ZZ_pEX
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Currently the c...

b99418ff79d8a61ec739c78a14becdecee965a30 authored over 1 year ago by Release Manager <[email protected]>
gh-36070: `sage.{matrix,modules,probability,stats,quadratic_forms,tensor}`: Update `# needs`, modularization fixes


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f7e983329e6be85cb37c6d679a5961d2a4820d52 authored over 1 year ago by Release Manager <[email protected]>
gh-36067: `sage.{cpython,data_structures,databases,ext,parallel,structure}`: Update `# needs`


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48a4551106a622deea25f11f6b8116e43dd5d502 authored over 1 year ago by Release Manager <[email protected]>
gh-36059: Speed up the creation of submatrices of `Matrix_modn_dense_template` matrices


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3dd31ba4bec4a94b34ee38719cd66da34a27e21b authored over 1 year ago by Release Manager <[email protected]>
gh-36057: `sage.arith`: Update `# needs`


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18ad7f8a8f70e28aa7f782b9dd7ff3f9d2ca0769 authored over 1 year ago by Release Manager <[email protected]>
gh-36053: cython-lint : add note about unused imports


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e678d52de3bfee000d085764cd5ce257ceb900ac authored over 1 year ago by Release Manager <[email protected]>
gh-36050: normaliz: Update to 3.10.1


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6e19d23532bc0bf71bd524938607f28ff0bdd54f authored over 1 year ago by Release Manager <[email protected]>
gh-36047: New GitHub workflow to continue our images on Docker Hub


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8f938b705bf11d5c66a25541588482685c775f30 authored over 1 year ago by Release Manager <[email protected]>
gh-36046: Fix sqrt(sqrt(2)) memory leak in ginac numeric.cpp


Fix the memory leak when computing the outer sqrt in `sqrt(sqrt(2))`, as
reported on sage de...

aededc693c712091516930c8ece19b2ad943a24f authored over 1 year ago by Release Manager <[email protected]>
gh-36041: Implemented two new methods for dynamical semigroups


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8b1f387b8454cc0070d9c4efe7eaa7d83b936acd authored over 1 year ago by Release Manager <[email protected]>
gh-36030: Implement algebra_containment from Singular (issue #34502)


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811ac5974dfc7b9954ca18e86f81454c144e238d authored over 1 year ago by Release Manager <[email protected]>
gh-36018: Fix tests with singular 4.3.2p4


Due to changes in the output of `hilb` in singular 4.3.2p4 (it now
outputs a polynomial inst...

05ad57b78d9042529dbccf05ed418476fd0ad7ae authored over 1 year ago by Release Manager <[email protected]>
gh-36000: New functions `is_chebyshev` and `is_Lattes` for one dimensional projective dynamical systems


This PR carries the work and hopes to fix #28292.

All the codes in this PR were/are impleme...

72b41aa62062878d93e0f144f4397da47b7b1fd1 authored over 1 year ago by Release Manager <[email protected]>
gh-35991: Implement Goss polynomials of Drinfeld modules


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a102fbdf2ab133cbda4dd5ec0c06479a69bf7bbf authored over 1 year ago by Release Manager <[email protected]>
gh-35990: Working MCDS implementation using connectivity constraints


Extended `dominating_sets` to be able to generate Minimum Connected
Dominating Sets using co...

2e1df5ac0a84c233b1586e48a7603eb6021dc9dd authored over 1 year ago by Release Manager <[email protected]>
gh-35988: Implemented five new operations for dynamical semigroups


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433b855930be7b4177c324edf4408618755954ca authored over 1 year ago by Release Manager <[email protected]>
gh-35947: Initial implementation of dynamical semigroups


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c44c89e8d92e18e5df8bbe242f38d1db0e051955 authored over 1 year ago by Release Manager <[email protected]>
gh-35945: `sage.categories`: Update `# needs`


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f1866645a053f1c4d4f056f14ec3df9e20bd42c8 authored over 1 year ago by Release Manager <[email protected]>
gh-35914: Implement cocharacter and primitive Eulerian polynomials for hyperplane arrangements


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e6a0d138f0c2f448a35ac92738b4dbd7bc2ae910 authored over 1 year ago by Release Manager <[email protected]>
gh-35810: Drop support for GCC < 8.4, drop testing of `debian-buster` and `fedora-29`


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b4236243f7514a243d9d80c1a9b33df2e56658bd authored over 1 year ago by Release Manager <[email protected]>
gh-35743: gc: update to 8.2.4


### :books: Description

Update gc package to the latest stable upstream release.

More deta...

66ee0ca6692349e2b67bc5a4efd9013fe68a3ee6 authored over 1 year ago by Release Manager <[email protected]>
gh-35716: `sage.functions`: Decouple from `sage.symbolic.expression` and `mpmath`, update `# needs`


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7b97cfde4828ffa238aeb3278c0ddeea5e7da35b authored over 1 year ago by Release Manager <[email protected]>
gh-35404: Drop support for Python 3.8


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055a3ea9dc81159eac091d4dd4c4809c3f941c41 authored over 1 year ago by Release Manager <[email protected]>
gh-35399: libatomic_ops: Update to 7.8.0


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fe49240ceb15e8c20a4780e21104f8d30b05e250 authored over 1 year ago by Release Manager <[email protected]>
gh-35084: build/pkgs/cython: Update to 0.29.36


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76191ac736a5696a646b3d2952c69bcc0ae168bf authored over 1 year ago by Release Manager <[email protected]>
build/pkgs/ipython/install-requires.txt: reject <ipython-8.11

Sage isn't ready for ipython-8.11 yet because it requires a newer
prompt_toolkit (https://github...

3cd6cb69ed457889b93fb71e0aea75ad060c786d authored over 1 year ago by Michael Orlitzky <[email protected]>
sage.combinat.root_system: More block tags, docstring/doctest cosmetics

5635dc41844a827c97ae6095ce3cfbee60c42856 authored over 1 year ago by Matthias Koeppe <[email protected]>
python-style loops in sage.graphs

79f8fe278654451196a24b7d4f775852e319166f authored over 1 year ago by dcoudert <[email protected]>
add forgotton diese in posets

b42148cde124e40b30d457825cede20bcd6a8af5 authored over 1 year ago by Frédéric Chapoton <[email protected]>
fixed three things

74f7748842ad1a973bef2c998fea7b9951d0e4fe authored over 1 year ago by Dang <[email protected]>
python-style loops in data_structures (partial) + some pep8

d27e9129697b726e464a46d39e08fb90ca0877fe authored over 1 year ago by Frédéric Chapoton <[email protected]>
more details in needs annotations in posets

699024b4d94d187d2df3fff5d08140e678d6f7d9 authored over 1 year ago by Frédéric Chapoton <[email protected]>
sage.combinat.root_system: Use more block tags

68d31dbb4adb150985e7f28ea8c90d87c4352c97 authored over 1 year ago by Matthias Koeppe <[email protected]>
sage.combinat.root_system: Fixups for modularization changes

225acf7a9d098278de9c5cd0259463a2986bdcbf authored over 1 year ago by Matthias Koeppe <[email protected]>
fix Conrey number of trivial Dirichlet character

1b815e016a49ace47885b5f56c7ac60c112249f5 authored over 1 year ago by Frédéric Chapoton <[email protected]>
moving optional into blocks

dd3bc96c8181f5eb732d08e9c87f61fe37a2d2dd authored over 1 year ago by Frédéric Chapoton <[email protected]>
Merge branch 'develop' into needs_in_posets

d6eb09d5f45e78c22cc231d7827e6611d77c7c4e authored over 1 year ago by Frédéric Chapoton <[email protected]>
Removed the forbidden linebreak

Maybe Linter likes me now

8e9c87aa569093df6dd5be6a365d834a8a7dfc75 authored over 1 year ago by 65537 <[email protected]>
build/pkgs/pip/distros/gentoo.txt: drop USE=vanilla requirement

d87feed8f8ecf975bffe1184594a921a9317beb1 authored over 1 year ago by Michael Orlitzky <[email protected]>
m4/sage_python_package_check.m4: update pkg_resources import

The pkg_resources module is now imported with,

import pkg_resources

instead of

import set...

5c60ddf026059ee52bde7720453f40e31cee64fe authored over 1 year ago by Michael Orlitzky <[email protected]>
sage.combinat.root_system: Use more block tags, restore lost comments

f6e599a7bd062dee26384aaf7537c2c47aa06750 authored over 1 year ago by Matthias Koeppe <[email protected]>
src/sage/combinat: sage -fixdoctests --only-tags

a75404d5fae78b75a6c45e61b7b5cc5b885a61f5 authored over 1 year ago by Matthias Koeppe <[email protected]>
src/sage/combinat: Update file-level doctest tag

260ee7779a54359a8e87a4ae1d0c9ec433a534a3 authored over 1 year ago by Matthias Koeppe <[email protected]>
sage.combinat.root_system: Update # needs

94695465d532f0cfbe558d12871602048fa12146 authored over 1 year ago by Matthias Koeppe <[email protected]>
./sage -fixdoctests --distribution sagemath-categories --only-tags src/sage/combinat

59da456ca0d71e8b72d041dffcbbfe9589726f23 authored over 1 year ago by Matthias Koeppe <[email protected]>
Update # optional / # needs

b59d93b1b967ea3fa950fbad307f73c172552031 authored over 1 year ago by Matthias Koeppe <[email protected]>
sage.combinat: Update # optional / # needs

f3e9bd098dc35524476291d09829b021d8a5760f authored over 1 year ago by Matthias Koeppe <[email protected]>
src/sage/combinat/root_system/reflection_group_real.py: Move import into method

85ef414c92a8dd1fa3b430b9b51eb0a76c6158b9 authored over 1 year ago by Matthias Koeppe <[email protected]>
src/sage/combinat/root_system/non_symmetric_macdonald_polynomials.py: Use file-level # optional - sage.graphs

d31af432047e2599b015261fa1b511a08cdb3b29 authored over 1 year ago by Matthias Koeppe <[email protected]>
src/sage/combinat/root_system/non_symmetric_macdonald_polynomials.py: Add # optional

93d5ab4bf16f93efed8c43ebb1a7509470982ad7 authored over 1 year ago by Matthias Koeppe <[email protected]>
src/sage/combinat/root_system: More # optional

45a679958b12fd51a45e773195bb4f22cdfcc284 authored over 1 year ago by Matthias Koeppe <[email protected]>
src/sage/combinat/root_system: Add # optional

3300fb6a0e2d3a9fbeaab6387894850edce9fd01 authored over 1 year ago by Matthias Koeppe <[email protected]>
src/sage/combinat/root_system/root_system.py: Add # optional

8f2ab5d81011d6c468b85ac5ccb5b6eadb292c09 authored over 1 year ago by Matthias Koeppe <[email protected]>
src/sage/combinat/root_system/root_space.py: Add # optional

1dc2c3f29b404c86f983fb86d2f547e53692650a authored over 1 year ago by Matthias Koeppe <[email protected]>
src/sage/combinat/root_system/weyl_group.py: Add # optional

930ff18abaaa323da3d84e99e0e7f6d3e20e931f authored over 1 year ago by Matthias Koeppe <[email protected]>
src/sage/combinat/root_system/integrable_representations.py: Add # optional

1a2956268de6630a61059e4920cfa7e72381aa7b authored over 1 year ago by Matthias Koeppe <[email protected]>
src/sage/combinat/root_system/hecke_algebra_representation.py: Doctest cosmetics

7a15ffa842a500d10426f1e90056f84198f1ab92 authored over 1 year ago by Matthias Koeppe <[email protected]>
src/sage/combinat/root_system/ambient_space.py (_test_norm_of_simple_roots): Skip the test on ImportError

dd0f5a855ae0de06a00a91fe13d971a67135ac89 authored over 1 year ago by Matthias Koeppe <[email protected]>
src/sage/combinat/root_system/cartan_matrix.py: Modularization fixes for imports

621650318da1818870890fcce4b0c26d881a84b4 authored over 1 year ago by Matthias Koeppe <[email protected]>
src/sage/combinat/root_system/root_lattice_realization_algebras.py: Add # optional

24639472d045841ea312acda4e68035a2c47d0b5 authored over 1 year ago by Matthias Koeppe <[email protected]>
src/sage/combinat/root_system/root_lattice_realization_algebras.py: Add # optional

46a25d74c9f5d3fe79da6b63ff20a992fcc935b2 authored over 1 year ago by Matthias Koeppe <[email protected]>
src/sage/combinat/root_system/root_lattice_realization_algebras.py: Add # optional

9e5b0736f7e4c7636acce06e26aa87581d2551fa authored over 1 year ago by Matthias Koeppe <[email protected]>
More # optional

81c715430ef77077289a50a79082b3b5241a42b6 authored over 1 year ago by Matthias Koeppe <[email protected]>
pycodestyle fixes

dcb8ace6364cf5b0b3057da1efb710bc0f78d3ef authored over 1 year ago by Matthias Koeppe <[email protected]>
src/sage/combinat/root_system/weight_lattice_realizations.py: Add # optional

2a6293d9dd85d6083662eb6c70315f2a25842db5 authored over 1 year ago by Matthias Koeppe <[email protected]>
sage.combinat.root_system: In _test_... methods, catch ImportError

21a49008b802d8f3f98902cf3aee7330a05340ca authored over 1 year ago by Matthias Koeppe <[email protected]>
More # optional

b2390dca4f9fa561180f9ed71e354a627175e720 authored over 1 year ago by Matthias Koeppe <[email protected]>
sage.combinat: More # optional

d2b8c89b7bbc9cdcb2d9adc216238ffb8a62933a authored over 1 year ago by Matthias Koeppe <[email protected]>
sage.combinat.root_system: More # optional

44ad5c3cd82f49ad93dc04ce472da77dc1bdf296 authored over 1 year ago by Matthias Koeppe <[email protected]>
sage.combinat: More # optional

555eb875ab8aeb58bb64205f2d0886bda0a5fc76 authored over 1 year ago by Matthias Koeppe <[email protected]>
sage.combinat: Modularization fixes

7eef144779dd6a737f831f7865b55d2ab6c54fec authored over 1 year ago by Matthias Koeppe <[email protected]>