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github.com/sagemath/sage

Main repository of SageMath
https://github.com/sagemath/sage

refresh the cython file real_roots (pep8, range, etc)

9bc136f9cc72dee1557981b9f9180b4670194c81 authored over 1 year ago by Frédéric Chapoton <[email protected]>
Enable conda ci for all PRs and remove experimental label

87fdf668364c3decea7e12144129d2ac5cb40ea2 authored over 1 year ago by Tobias Diez <[email protected]>
fix remaining W605 warnings in pxi files

cac1e592eb6f7e14310224d301a260f2c906771d authored over 1 year ago by Frédéric Chapoton <[email protected]>
src/sage/combinat/designs/incidence_structures.py: More block tags

67eb2e1f888ca580977d45f9acce9c2b37f79d5b authored over 1 year ago by Matthias Koeppe <[email protected]>
src/sage/combinat/integer_vectors_mod_permgroup.py: Use more block tags, docstring cosmetics

82fb0f5fec3c69de9007798b2d2f5bc2bbdc4512 authored over 1 year ago by Matthias Koeppe <[email protected]>
src/sage/graphs/generators/smallgraphs.py: Fix doctest dataflow warnings

e110826f58dbd4411c378b046f229a69e3c6c5ea authored over 1 year ago by Matthias Koeppe <[email protected]>
Merge remote-tracking branch 'upstream/develop' into needs_for_sage_graphs_sage_combinat_designs_sage_combinat_posets_sage_sandpiles

5763013850e8239550386847da785f27b85b66bb authored over 1 year ago by Matthias Koeppe <[email protected]>
sage.sets: More block tags

a330894dc098502b865b58039516ecee6fb6f309 authored over 1 year ago by Matthias Koeppe <[email protected]>
pkgs/sage-conf_conda/setup.py: Exit early when no conda env is active

46c28c0d104535f685931659e864efcd7be7e09b authored over 1 year ago by Matthias Koeppe <[email protected]>
pkgs/sage-conf_pypi/setup.py: Restructure like ..._conda, prepare for editable mode

2c54bdc06263c74078fda88eb5fec37be055ca97 authored over 1 year ago by Matthias Koeppe <[email protected]>
pkgs/sage-conf_conda/setup.py: Skip some files generated in editable mode when copying in non-editable mode

18aebf4077a8d7a98f688ee0548e8ce978a561a0 authored over 1 year ago by Matthias Koeppe <[email protected]>
Update README and messages

66a407eaa4ced5af6155eb98ca379bd3770b3c7e authored over 1 year ago by Matthias Koeppe <[email protected]>
pkgs/sage-conf_conda/setup.py: In editable mode, do not make a copy of SAGE_ROOT

870ce5d32b19946e21bdf26f455dd1a962cba7aa authored over 1 year ago by Matthias Koeppe <[email protected]>
pkgs/sage-conf_conda: Make sage_root a symlink to SAGE_ROOT

77925d09a8116bfbce4c3c29a529b408f4df560b authored over 1 year ago by Matthias Koeppe <[email protected]>
pkgs/sage-conf_conda: Fix setup.py

944bc9723abf50d86036342e24ebd29306f2b9e8 authored over 1 year ago by Matthias Koeppe <[email protected]>
src/doc/en/installation/conda.rst: Add note on editable_mode=compat

ab0960722972c43d097671f806ec567e9fd31df2 authored over 1 year ago by Matthias Koeppe <[email protected]>
pkgs/sage-conf_conda: New, use it in conda install instructions

efb23b08e74bbfc8573c31a019dd28ea8af9c427 authored over 1 year ago by Matthias Koeppe <[email protected]>
partial cython-lint cleanup in padics/

041b35fff35337bc4c6ee91c881df580a1c8cbf2 authored over 1 year ago by Frédéric Chapoton <[email protected]>
tox.ini (ubuntu-lunar,mantic): Remove IGNORE_MISSING_SYSTEM_PACKAGES; all standard packages are available

def59aefc2811e559920fd2dde4e9d8c9f3acbb7 authored over 1 year ago by Matthias Koeppe <[email protected]>
suggested details

de726e5122f5e4af26bc95aa3bac945d9471e52d authored over 1 year ago by Frédéric Chapoton <[email protected]>
change hint definition

56734816a8ba6e0784b23bca3b59ab5735ce9ef7 authored over 1 year ago by Enrique Artal <[email protected]>
build/pkgs/{pkgconf,_bootstrap}/distros/arch.txt: Update

0366627bd693ab56762e83317d356dd71fc18f3c authored over 1 year ago by Matthias Koeppe <[email protected]>
tox.ini (debian-buster): Use IGNORE_MISSING_SYSTEM_PACKAGES=yes

f83da2e916f8d1bc70342b7aefd5031e47700fa7 authored over 1 year ago by Matthias Koeppe <[email protected]>
build/pkgs/pillow/spkg-install.in: Update to new config format

00f6b00309a4c06ef12b4a998a8397e09a9f2751 authored over 1 year ago by Matthias Koeppe <[email protected]>
build/bin/sage-dist-helpers (sdh_pip_install): Handle --config-settings

70b2d0b0f83b6d6751b25bd2f42c3d83a65f0d3a authored over 1 year ago by Matthias Koeppe <[email protected]>
build/bin/write-dockerfile.sh, .github/workflows/scan-logs.sh: Use more GH Actions output groups

6c3d558ca6add713b20ba71312915b0dfb0c01a7 authored over 1 year ago by Matthias Koeppe <[email protected]>
tox.ini: When setting --with-system-python3=force, always provision the python3 depcheck dependencies

8f57adb85390a48158b835503655e29e92f68c68 authored over 1 year ago by Matthias Koeppe <[email protected]>
build/pkgs/freetype/distros/debian.txt: change to fix debian-sid

3f8d4cbe87894ddc6b0ca428a50718e1c5ef92d1 authored over 1 year ago by Matthias Koeppe <[email protected]>
build/pkgs/_python3.*/distros/fedora.txt: Packages now include a dot - except on centos-stream-8

2356efa09d236a5aad50acbd4878c4dc4565e2cb authored over 1 year ago by Matthias Koeppe <[email protected]>
tox.ini (archlinux): Use IGNORE_MISSING_SYSTEM_PACKAGES=yes

a20d61f9e7b80fb3a615863374891b9251d1d82e authored over 1 year ago by Matthias Koeppe <[email protected]>
.github/workflows/docker.yml, tox.ini: Use the commit sha before merging the CI fixes as the DOCKER_TAG

6429f21cff81824853fc328debb8032a69e581a7 authored over 1 year ago by Matthias Koeppe <[email protected]>
Handle almalinux-8 like centos-8

d07403d8f89369fe0d6b8eb99975652637b252e3 authored over 1 year ago by Matthias Koeppe <[email protected]>
Merge remote-tracking branch 'upstream/develop' into matplotlib_pillow_update

a8f91a0ad3410b55646138f31967ded97f46c9d8 authored over 1 year ago by Matthias Koeppe <[email protected]>
more fixes in cubegroup.py

ccd9ec006f21704dd144f56855329bb1f5838a52 authored over 1 year ago by Frédéric Chapoton <[email protected]>
Do not run sage-env more than once, for real.

b0811699fc83daeede9fbbda1f39925753196cb7 authored over 1 year ago by John H. Palmieri <[email protected]>
from gap to libgap

4c4458e78bffd3f597c143d8bdc4d8cee2d0f197 authored over 1 year ago by Frédéric Chapoton <[email protected]>
Merge branch 'develop' into graphs/improve_graph_and_digraph

d1edec96f5e5be5616358b6f0d669bb6fa2ce25b authored over 1 year ago by David Coudert <[email protected]>
build/pkgs/pip: Update to 23.2.1

10d98a6e25c993f45342b0b6c1b0a2f032d1e314 authored over 1 year ago by Matthias Koeppe <[email protected]>
build/pkgs/flit_core: Update to 3.9.0

445090863a56ddfa1a758ee7a11f45a967241f6d authored over 1 year ago by Matthias Koeppe <[email protected]>
build/pkgs/packaging/dependencies: Now depends on flit_core, not setuptools

83813eb2d563af5b71c890712ed8f09c073fc818 authored over 1 year ago by Matthias Koeppe <[email protected]>
a few more links to errors in the doc

e9a9a0be2271d2c643ab6c685ada341ed7543b59 authored over 1 year ago by Frédéric Chapoton <[email protected]>
suggested details

be29cd1213d561a73764a7e52aeaed11b58a86ce authored over 1 year ago by Frédéric Chapoton <[email protected]>
change formulation in the doc of q-Catalan

dee3b9fe66cc51748e356bbfe513f96de9c7b3c9 authored over 1 year ago by Frédéric Chapoton <[email protected]>
Merge branch 'develop' into q-fuss-catalan

024f84bb5fb5dcba28f844a9f757d5400db3cad6 authored over 1 year ago by Frédéric Chapoton <[email protected]>
sum of ideals

fbb77c49de41e3d94404ea6861f0d2bab932175d authored over 1 year ago by Enrique Artal <[email protected]>
a few less parentheses in combinat and rings

1d8c4a205e63504e39e69590b75ca35c915c1b06 authored over 1 year ago by Frédéric Chapoton <[email protected]>
redefine gens_reduced and more doctests

cbcc182b07a5f1664826aee23bf8e9712d5eec57 authored over 1 year ago by Enrique Artal <[email protected]>
Merge branch 'develop' into t/34279/coveringarrays

74c1b3487807e8bcdc510af0cb9bd42b2df6b928 authored over 1 year ago by Dima Pasechnik <[email protected]>
A few more changes suggested by reviewer

4df0d1a0c8486f56dd0363fa04f8dc928ee578ce authored over 1 year ago by John H. Palmieri <[email protected]>
trailing spaces

1153822b0e99841d74bf629ba51ec5d32ddd5d92 authored over 1 year ago by Enrique Artal <[email protected]>
cut characteristic varieties when the total ideal is reached

8da8781f109e97e87885c0a05c55e5a6d2fef45e authored over 1 year ago by Enrique Artal <[email protected]>
tox.ini, build/bin/write-dockerfile.sh, build/bin/sage-print-system-package-command: Add alpine

a80b5c0ad9ae1ab273a8db7ed6a26fb9727fdfed authored over 1 year ago by Matthias Koeppe <[email protected]>
Add more alpine.txt

1aa35692eab8e6e3d099a38a7472675fcc51a4a2 authored over 1 year ago by Matthias Koeppe <[email protected]>
build/pkgs/mpfr/distros/alpine.txt: New

1e01f4576ee9f67c89a4d7ac59d9a1bf93f633b3 authored over 1 year ago by Matthias Koeppe <[email protected]>
build/pkgs/_prereq/distros/alpine.txt: Add coreutils

0bab09ca9fa029fc6284ab37d9ec8e84f95ddff3 authored over 1 year ago by Matthias Koeppe <[email protected]>
build/pkgs/{graphviz,qhull,r}/distros/alpine.txt: Add non-dev packages

651c91e55c706d26a72710ff7e733b7355506d38 authored over 1 year ago by Matthias Koeppe <[email protected]>
adding xgcd, etc, for laurent polynomials in one variable

68a94e5fd3f168718044d11e5610894a7af2a86e authored over 1 year ago by Enrique Artal <[email protected]>
a few details in combinat (designs)

e63a3f5c111d52a988078b16075be95d956a9e03 authored over 1 year ago by Frédéric Chapoton <[email protected]>
.github/workflows: Remove ci-wsl, ci-cygwin-standard

aee71fedf0424ae8e3b762877330e115490bec04 authored over 1 year ago by Matthias Koeppe <[email protected]>
fixing pep8 E275 in rings/ and combinat/

11995a6e4fd7f183d420f307af77297974a77a58 authored over 1 year ago by Frédéric Chapoton <[email protected]>
use fitting_ideals for characteristic varieties

df401b2140d657bc778124266c2eb9a98dedf1ee authored over 1 year ago by Enrique Artal <[email protected]>
fix detail

87c2f1e33f84ad460a9608bf6c6c7e2570f07883 authored over 1 year ago by Frédéric Chapoton <[email protected]>
class of matrices of Laurent mpolynomials

905d0420cc6d20fbb81a1876642268fc362ac996 authored over 1 year ago by Enrique Artal <[email protected]>
fix E228 and E225 in coding,crypto,dynamics,geometry,manifolds,modular

a6aa117a60a0ca26c33268df40904eed43a0a8f6 authored over 1 year ago by Frédéric Chapoton <[email protected]>
Merge branch 'sagemath:develop' into laurent

da769a938d31dc6dfbc5c3c427bc9c6f45088193 authored over 1 year ago by Enrique Manuel Artal Bartolo <[email protected]>
Merge branch 'develop' into merge-group

043e76a2044198d38f0e76a5a9453ed417ca09e2 authored over 1 year ago by Tobias Diez <[email protected]>
Merge branch 'develop' into conda-lock

8756a3d99c008d6c509227ffca9aab3f43e6dca5 authored over 1 year ago by Tobias Diez <[email protected]>
.github/workflows/doc-build-pdf.yml: Fix get_ci_fixes when there are no fixes

7565e0c82d6f3c432df00a2e5c333b9c049dc24d authored over 1 year ago by Matthias Koeppe <[email protected]>
Merge branch 'fix_get_ci_fixes' into ci-doc-pdf-followup

c4f4310ea31b86a098991beca3100c0a3186c47a authored over 1 year ago by Matthias Koeppe <[email protected]>
.github/workflows/build.yml, doc-build.yml: Fix get_ci_fixes when there are no fixes

c5599a3b05c26a34506fd154cc056ea979cabd02 authored over 1 year ago by Matthias Koeppe <[email protected]>
build/pkgs/pplpy/patches/relative-import.patch: Remove

525dedd68f8b995aade17d3644a48578e5e29413 authored over 1 year ago by Matthias Koeppe <[email protected]>
Merge branch 'develop' into numpy_1_26

2eb2250f21a9d31f32f7a8d2078402331bdcb6f2 authored over 1 year ago by Matthias Köppe <[email protected]>
build/pkgs/pplpy/patches/cython3-legacy.patch: Remove

c22728a5c97a509997e319099b15adacaee7bfb8 authored over 1 year ago by Matthias Koeppe <[email protected]>
Upgrade pplpy to 0.8.9

2d27dd6fdbed9c6ad792ca94424255b992cda2bb authored over 1 year ago by Vincent Delecroix <[email protected]>
.github/workflows/doc-build-pdf.yml: Use actions/upload-artifact@v3

9b01611835feb68c4d1be59bcc94a223a99c78fa authored over 1 year ago by Matthias Koeppe <[email protected]>
.github/workflows/doc-build-pdf.yml: Update from doc-build.yml, change container

a436b1fe78a8d71d80f00be17a1066100f858595 authored over 1 year ago by Matthias Koeppe <[email protected]>
Updated SageMath version to 10.2.beta5

1cf0c13e5271b13f0db4364a39d8bd80e13f66cc authored over 1 year ago by Release Manager <[email protected]>
gh-36345: `ecm`: Work around build failure with Xcode 15

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b01856309bcb0d25e9cf830da19fa1cdd24df2bf authored over 1 year ago by Release Manager <[email protected]>
gh-36339: fix expect interface for newer ptyprocess


This will close https://github.com/sagemath/sage/issues/32147

ptyprocess 0.5.2+ included a ...

2c714728fd0a924f93ba8bc7f2841065d042cc2d authored over 1 year ago by Release Manager <[email protected]>
gh-36338: CI: Merge open blocker PRs in all CI workflows + other improvements


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bb04839a5d55fbd3bfd1bf459c8e4b918bd0e043 authored over 1 year ago by Release Manager <[email protected]>
gh-36336: add some class roles for linking Errors in doc


this is adding a few `class` roles so that errors in the doc are linked
to python documentat...

a9cb852973a522998fa726fd639282e38d04d882 authored over 1 year ago by Release Manager <[email protected]>
gh-36335: using more itertools.product


a few more cases where one can use itertools.product instead of our
custom iterator

### :me...

247ea886f0e905a80168a09351f108882a563e04 authored over 1 year ago by Release Manager <[email protected]>
gh-36330: src/sage/repl/load.py: replace tmp_dir()


Standard `tempfile.TemporaryDirectory()` replacement.

Issue: https://github.com/sagemath/sa...

f4dc2bc1c8e89cbf31c938db84daff808d4bced5 authored over 1 year ago by Release Manager <[email protected]>
gh-36327: fix the linter once more


fixing the linter, once again broken

### :memo: Checklist

- [x] The title is concise, info...

f6a9058bca4f9b95ad0aa89eadb1335bc41e86eb authored over 1 year ago by Release Manager <[email protected]>
gh-36326: more fixes for E228 and E225 in combinat and some other folders


Another wave of fixes for pycodestyle warnings E228 and E225, in
combinat and other folders....

496fb917960dc4246e08e8b1a31949e5e18454d4 authored over 1 year ago by Release Manager <[email protected]>
gh-36323: src/sage/combinat/words/words.py: replace tmp_dir()


Standard `tempfile.TemporaryDirectory()` replacement.

Issue: https://github.com/sagemath/sa...

ccf337e844302aa20024f34398115299f281c8aa authored over 1 year ago by Release Manager <[email protected]>
gh-36319: build/pkgs/setuptools_scm_git_archive: Remove (obsolete)


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feed3d41ef91ece012bc3b55c72914dc8206fb83 authored over 1 year ago by Release Manager <[email protected]>
gh-36316: build/pkgs/lrcalc_python: add standard python spkg-configure.m4


I'm adding this to Gentoo in about five minutes, and the system copy
works fine.

URL: h...

22a32e799295591729700e4dfbbac917caf59ace authored over 1 year ago by Release Manager <[email protected]>
gh-36299: Generic implementation of fitting ideal


and specific _fitting_ideal for MPolynomialRing

This implements a method `fitting_ideal` fo...

034f1f643b7db1f6264e8ee70a0f2faf440cd1d4 authored over 1 year ago by Release Manager <[email protected]>
gh-36284: improve checks


We attempt to deduce automatically, when we can check coefficients
without breaking implicit...

c325311ba47be326be7f40e85c13f9027b501d56 authored over 1 year ago by Release Manager <[email protected]>
gh-36276: Yet more spkg_configure for standard python packages


This is a continuation of #36256

- Fixes #36301
- Fixes https://groups.google.com/g/sage-
r...

0b5fc8e97a0be4af4b2bc1a9f04651b5c405ff47 authored over 1 year ago by Release Manager <[email protected]>
gh-36275: `sage.graphs.generic_graph`: some care with return ... else statements


We change this kind of statements:
```py
if ....:
return ...
else:
return ...
```
to...

ed478e7678731754d78513d3b623c8866206afc5 authored over 1 year ago by Release Manager <[email protected]>
gh-36270: full pep8 for modular/hecke


small cleanup for `modular/hecke` folder

### :memo: Checklist

- [x] The title is concise, ...

602b57114df282ecbdf6a11f8b97da3eb17c1845 authored over 1 year ago by Release Manager <[email protected]>
gh-36267: Change `ipympl`/`pkgconfig`/`widgetsnbextension` to wheel packages, drop build deps


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4f8a8af331fefe0a54c5bc711063004587c57ad4 authored over 1 year ago by Release Manager <[email protected]>
gh-36234: Use patchelf from the system


The package is just an executable, so if it's in the user's `$PATH`, we
can use it.

URL...

1af7f8f2b6b56dd2fc8f9cc79b22b71e0144ef80 authored over 1 year ago by Release Manager <[email protected]>
gh-36166: Additions to the bigraded Betti number methods


This pull request expands the functionality of
``bigraded_betti_number()`` methods of a ``Si...

ce855de61cbc15df6db345d714044ac1e4793d91 authored over 1 year ago by Release Manager <[email protected]>
gh-36110: Update Cython to 3.0.2


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05d7d1dceeb6600d25276993924b014aa2d3f4e5 authored over 1 year ago by Release Manager <[email protected]>
gh-35866: CI build.yml, doc-build.yml: Use output groups


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-->
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5cef467b357e5cda6f943be8021fb533f96f4e87 authored over 1 year ago by Release Manager <[email protected]>
gh-35537: Fix Sphinx markup in some file


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-->
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2829cf2182fb1d58e0c023f354c3dc22c6193651 authored over 1 year ago by Release Manager <[email protected]>
make some implicit assumptions in BMSS code explicit

81996bb0514b1fcf19567f811887b89e7e68b9bf authored over 1 year ago by Lorenz Panny <[email protected]>