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github.com/ome/omero-common

Gradle project containing common utilities for OMERO
https://github.com/ome/omero-common

Remove unused integration.testng.xml files.

54ff3aa978bc444fdbb8f5269cfcbf86b680eb99 authored about 11 years ago by Blazej Pindelski <[email protected]>
adjust remove groups validation

a3497aa33a1c0b5dfc91d192aa95640d647200e8 authored over 11 years ago by Mark Carroll <[email protected]>
remove uselessly blank lines

ad2746e7788b6d025ab041cd5c073e578fc6ff4b authored over 11 years ago by Mark Carroll <[email protected]>
do not allow users to be removed from all groups

b9b8d264fda9ad88c23a0e4d0ca15d3de54f7988 authored over 11 years ago by Mark Carroll <[email protected]>
reword admin user text

5a3ab9af4c8fdb9652792f70a0e8c78ee0b12b79 authored over 11 years ago by Mark Carroll <[email protected]>
add Javadoc documenting #11465 changes

8e07945ad707f0c8f06210bf5ad1405c8ce797fa authored over 11 years ago by Mark Carroll <[email protected]>
add convenience predicates for boolean role properties

f755dd8aa38f49adc21bbe66cd967f4939aa8381 authored over 11 years ago by Mark Carroll <[email protected]>
add guest user to Roles object

93bfb0e1f1b8ee2ea129c65278c6e6a651bd9679 authored over 11 years ago by Mark Carroll <[email protected]>
remove svn revision notes

df690617ff8d15ef679dcd8383259b34c56f461c authored over 11 years ago by Mark Carroll <[email protected]>
Revert agent back to OMERO.test

1d5c96d7a68d8143fd3c0a6e3942968f4a9c7028 authored over 11 years ago by Blazej Pindelski <[email protected]>
Fix test - change version to random text.

74bf55b8c5fdefcee17c9926cfa4723681ee9bd7 authored over 11 years ago by Blazej Pindelski <[email protected]>
Fix "common" test output (see #11388).

65430494329fc1a1eedda5b3d31c83eece00a135 authored over 11 years ago by Blazej Pindelski <[email protected]>
Merge pull request #1412 from rleigh-dundee/java6-minversion

Make JDK 1.6 the minimum supported version

b5d58cdf138af350fec163a2f7bac90416242496 authored over 11 years ago by Josh Moore <[email protected]>
Update order of hashes for checksum tests.

7ffd4a26966357270ded4fd77dd037b4fa382aed authored over 11 years ago by Blazej Pindelski <[email protected]>
Reorder files based on size.

9efbbccdbc7cee9a5ecc8491b53b8de6d4d15a06 authored over 11 years ago by Blazej Pindelski <[email protected]>
common/test: Remove unused files.

cc1943c2a0ae8427d6eefd24d1871da2eb6f5400 authored over 11 years ago by Blazej Pindelski <[email protected]>
eclipse: 1.6 is the minimum supported java version

f0f756c60cf9e1acdfe64623c602b1970e0fb6df authored over 11 years ago by Roger Leigh <[email protected]>
Update hash test classes with new expected vals.

e502e0099ce29fcb46773cc1e2f5d3234d9aa359 authored over 11 years ago by Blazej Pindelski <[email protected]>
Change test files for checksum unit tests.

4e4fae0de882f4336579f53a2f61c5be5d8420bf authored over 11 years ago by Blazej Pindelski <[email protected]>
remove unused FS readers config parameter

9323289764635c0476e8bff2207d5f8dbd0b3d15 authored over 11 years ago by Mark Carroll <[email protected]>
remove further mention of FS lite

71fec4840d52598d3cc660572f0bb70ede7bff9b authored over 11 years ago by Mark Carroll <[email protected]>
add warning of possible change to iContainer API

0ad9d53d2b83b3fdface072e574388a8d2e556a4 authored over 11 years ago by Mark Carroll <[email protected]>
adjust API method arguments as suggested by Jean-Marie

6f34e4392777b5037adee427c7843cf4356cc9ae authored over 11 years ago by Mark Carroll <[email protected]>
fix #10782: add IContainer.getImagesBySplitFilesets

702d532e01ac4af9d73af9981659cbe851645d42 authored over 11 years ago by Mark Carroll <[email protected]>
Minor adjustments not affecting behavior.

d49ff5766b67c202f2cecf3aea8b844038fc2367 authored over 11 years ago by Mark Carroll <[email protected]>
Don't overwrite System properties (see #10828).

ab053577f2ba9e55dc44026e64d67ea8c74f3818 authored over 11 years ago by Blazej Pindelski <[email protected]>
Publish PreferenceContext properties to System.properties

Just as the properties coming directly from Ice.Config are
published to System.properties, this ...

95ae6abe795142a4092e955d5c3de85b2a4594b4 authored over 11 years ago by jmoore <[email protected]>
Log some import logs to import logfile in ManagedRepository.

This gets the log file into the right place but still needs some work
cleaning up after itself a...

06496f4766bfcb66ac67a5cc32896e917837e5ca authored over 11 years ago by Colin Blackburn <[email protected]>
Add null-check and missing HQL query

8e5f07cc5b44f61c1a6e58415c23d8665ed0014a authored over 11 years ago by Blazej Pindelski <[email protected]>
Merge pull request #1006 from ximenesuk/slf4j

Convert logging to logback predominantly via slf4j

445c79794324e6ff3d5388d65e69f944fbbc9570 authored over 11 years ago by Josh Moore <[email protected]>
Rename OriginalFile's "sha1" property to "hash".

8b29b7c01a6305287576ddf96d47da3ce878c7b0 authored over 11 years ago by Mark Carroll <[email protected]>
Initial commit after using SLF4J Migrator.

b94db090df49bc5ead6e220c7bf2e7898c05d574 authored over 11 years ago by Colin Blackburn <[email protected]>
Correct spelling for "overridden". (rebase)

afbf78128b7620151dff856d649c6cec5435af2f authored almost 12 years ago by Mark Carroll <[email protected]>
Merge pull request #958 from bpindelski/chksm-adler32

Add remaining checksum algorithms (develop)

6191f0002471a35e3f94ac8fb132bd37b83aeb2f authored almost 12 years ago by Josh Moore <[email protected]>
Add missing factory logic and tests

e150118e78bbc9ecfe5f89081b5d1b87c28410b3 authored almost 12 years ago by Blazej Pindelski <[email protected]>
Fix method naming in checksum provider test class

37733dc079934bf89d0cd55aa7b6f25891bfee54 authored almost 12 years ago by Blazej Pindelski <[email protected]>
Add Murmur providers and tests

ce5809c32c8a1c0bf4d2590e1f30611077b8d57c authored almost 12 years ago by Blazej Pindelski <[email protected]>
Add CRC32ChecksumProviderImpl and test

19938682d80e34979bb34cda88954014e3b92990 authored almost 12 years ago by Blazej Pindelski <[email protected]>
Update Adler32ChecksumProviderImpl with new logic

e0b3acf2470acd120987081422c0cdb3fc3fdfee authored almost 12 years ago by Blazej Pindelski <[email protected]>
Add NonGuavaHashFunctionImpl and test

3951587ad515a425557247524f5742f2b3c79666 authored almost 12 years ago by Blazej Pindelski <[email protected]>
Make NonGuavaHasherImpl use the Checksum iface

ccafa4311e40e930fb8dd68554e401410cbfe61c authored almost 12 years ago by Blazej Pindelski <[email protected]>
Add NonGuavaHasherImpl and test

2773f78d70ef4d7bf60ba3d260483a960a38259b authored almost 12 years ago by Blazej Pindelski <[email protected]>
Add remaining hash algorithms to enum

974fc93ff5f85157d22ba79493611e43179e2f8c authored almost 12 years ago by Blazej Pindelski <[email protected]>
Finalise the Adler32 object

44170e32a625a6def72fa81353ffbca6e856569e authored almost 12 years ago by Blazej Pindelski <[email protected]>
Add comments, licenses and test class

9ad9787841f47314076d0e0dabce51ecb53c11d0 authored almost 12 years ago by Blazej Pindelski <[email protected]>
Implement auto-generated methods

df49d82384aaabd1015c427d24b78455719a0a2d authored almost 12 years ago by Blazej Pindelski <[email protected]>
Add Adler32 to ChecksumType and factory

528b8d6dc5a745f66411fa6b7aa10197d53c1f09 authored almost 12 years ago by Blazej Pindelski <[email protected]>
Add Adler32 provider and hasher

The Adler32Hasher class implements the Guava native Hasher
interface. Any methods not implemente...

4d8da9af46272dc47d43378ff508f0961a42dfdc authored almost 12 years ago by Blazej Pindelski <[email protected]>
Complete ChecksumProvider Javadoc.

25726d0baced73a5a06fc71562a6af80f202897b authored almost 12 years ago by Mark Carroll <[email protected]>
Update Javadoc on putBytes(byte[], int, int)

c5acd063bcb22ed5ec0862e1ede6dae29abeb2cb authored almost 12 years ago by Blazej Pindelski <[email protected]>
Add putBytes(byte[], int, int) and update tests

d6b2a60dcaa29b5bc847354d442197008a34a4c1 authored almost 12 years ago by Blazej Pindelski <[email protected]>
Add unit test for truncated ByteBuffer

d28ccf0ac849ee7d48238deb990fbce1ac694303 authored almost 12 years ago by Blazej Pindelski <[email protected]>
Remove reset(), rename method and update comments

0df40199f174ee9a59f5d09235bbbc4d4bea03bb authored almost 12 years ago by Blazej Pindelski <[email protected]>
Adjust putBytes for truncated byte buffers.

89d2df3dfd2876c9f76e66329d97b6aaf1dea3aa authored almost 12 years ago by Mark Carroll <[email protected]>
Add logic for defensive checksumAs* methods

95bd2adbe25cc9754a23c5c9a46b1d6d024a0d45 authored almost 12 years ago by Blazej Pindelski <[email protected]>
Fix tests and consumers to use new method name

7b730296cd9a96fa9128a8e254236a31d7de8df0 authored almost 12 years ago by Blazej Pindelski <[email protected]>
Add missing Javadoc and remove unused field

aa9c888835fb71e59b34ed656a17250929dfa2c3 authored almost 12 years ago by Blazej Pindelski <[email protected]>
Use guava.Files when calculating file checksum

52c0f996211abf32d2dc5a81e31eb3412c30cf6c authored almost 12 years ago by Blazej Pindelski <[email protected]>
Remove the commons-codec from omero-common

2ed9d444c62635281e3698e42ebb27180a80bf94 authored almost 12 years ago by Blazej Pindelski <[email protected]>
Make the Javadoc explicit about calling reset()

0517b7bdb0340f5d4338642bbae2bd12ffb5c0f2 authored almost 12 years ago by Blazej Pindelski <[email protected]>
Replace bytesToHex methods with commons-codec

60368311a4cfe0373c77cc13b13591279c9dbe62 authored almost 12 years ago by Blazej Pindelski <[email protected]>
Add commons-codec to omero-common

4f73d68abdea108a48b3d5e85f524ff1496768a2 authored almost 12 years ago by Blazej Pindelski <[email protected]>
Refactor checksum test classes

7b4f27d52b74a2e41622ce0c879c9098aec2cb6f authored almost 12 years ago by Blazej Pindelski <[email protected]>
Remove default provider and update consumers

0ea25698b186df6f237cccbdbe6a3ad655b98571 authored almost 12 years ago by Blazej Pindelski <[email protected]>
Introduce AbstractChecksumProvider and refactor

f6a35da439b606e2027ff08a3623b24ada0dfa55 authored almost 12 years ago by Blazej Pindelski <[email protected]>
Refactor ChecksumProvider into a fluent interface

299cf51ac03519f52efc88d672513c4ab9634474 authored almost 12 years ago by Blazej Pindelski <[email protected]>
Rename methods in ChecksumProvider interface

b8b0340cfc72b8eb3b9e0635d03312c48fcc3134 authored almost 12 years ago by Blazej Pindelski <[email protected]>
Fix comment markers in TestNG XML files

d0b9a866eca5fafa568a11122addc9a4075f5b3b authored almost 12 years ago by Blazej Pindelski <[email protected]>
Add checksum test package to TestNG suite

44ae61cca6584b9c92618ffafee1df2845ddc21f authored almost 12 years ago by Blazej Pindelski <[email protected]>
Add comments and licences and correct minor bugs

53d574a7ef7aa3c7276e96b7998302a36bb9e1dd authored almost 12 years ago by Blazej Pindelski <[email protected]>
Fix minor typos and refactor logic

ba0834ee63ae15d0817ef1be4c81d8c37f1c6c3f authored almost 12 years ago by Blazej Pindelski <[email protected]>
Fix classpath for unit tests in omero-common

8b385f4ed1f82bd14ba5af54fc3f3878a542f65a authored almost 12 years ago by Blazej Pindelski <[email protected]>
Fix typo in exception message

01c4aa350097ea228a719fb3e2c4e9f0b968fbde authored almost 12 years ago by Blazej Pindelski <[email protected]>
Add unit tests for the checksum package

a892c481f9b9bda7dcf6072f439f8375bb764cc5 authored almost 12 years ago by Blazej Pindelski <[email protected]>
Move checksum package to common/ome/util

7957dee23faabd2a283e78493a69dc00cb78709c authored almost 12 years ago by Blazej Pindelski <[email protected]>
Move FileUploader utility from common to server

e1b8d0eff647412daabdaaa144266d648721db0e authored almost 12 years ago by Blazej Pindelski <[email protected]>
Add Java doc.

bb1bbd59c4ceb30b1283a463048564afd82802f9 authored almost 12 years ago by jburel <[email protected]>
Merge pull request #587 from jburel/rebased/develop/modulo-retrieve

Modulo retrieve (rebased onto develop) Merging before we start refactoring tests.

dcdd9fe7bd9d38a4d60c7f263818bad3be89dfbf authored almost 12 years ago by jean-marie burel <[email protected]>
Improve Java doc.

de57b9aa42fb494797ab6f02a1df7617e36637c7 authored almost 12 years ago by jburel <[email protected]>
Fix documentation.

663961b3b31fbf1e305ae9093ade7d4e4a07e60f authored almost 12 years ago by jburel <[email protected]>
Add method to retrieve given annotation linked to object.

Method useful to retrieve annotation like modulo annotation
added at import time.

a55b78532136c7b1f659f505dda71d2fc89ad663 authored almost 12 years ago by jburel <[email protected]>
Fix reporawfilestore.py test

This test is now also a subclass of AbstractRepoTest
and no longer tries to access the repositor...

047c048cc65ec9fc78658b4d859931f50793ca2e authored almost 12 years ago by jmoore <[email protected]>
Add PyramidService.getResolutionDescriptions method (See #9813)

Provide a list of ResolutionDescription objects which should
eventually represent the entire geo...

1cd8003b692d416ee989d230375d8dd697a344ff authored almost 12 years ago by jmoore <[email protected]>
Remove links to non-existing wiki pages

0a467bccc12f66870d5bc7724bbbeda8e3fa18e3 authored about 12 years ago by Sebastien Besson <[email protected]>
Allow the pixels path to be retrieved.

071534d09f730c1bee8b7eb147de9ee9f08d125c authored over 12 years ago by Chris Allan <[email protected]>
Move template-based directory look-up to the repository.

42c3dcc4fc12d7ca224c4e1cb85fe82f8b789c9f authored over 12 years ago by Colin Blackburn <[email protected]>
Added import path template to properties, see #6223

d6b0a34f5b8ef443242b587d51f42350cd1455b3 authored over 12 years ago by Colin Blackburn <[email protected]>
Replace https:// by http:// in trac URLs

712838950ca817d90284a22c0a82ce88ba5e634c authored over 12 years ago by Sebastien Besson <[email protected]>
Replace omero by ome in trac URLs

70d3bd54bffb05d9c245cace5c8c0c9e5ad6dd65 authored over 12 years ago by Sebastien Besson <[email protected]>
Merge pull request #212 from aleksandra-tarkowska/sprint18-bugfixes

710206f5a416e6222e884e81421fb8629a3bddc1 authored over 12 years ago by jmoore <[email protected]>
Merge pull request #206 from joshmoore/build-issues

Build/deploy issues

4a0560fbb1d8b4242dd557badbe26095a3672f1a authored over 12 years ago by Chris Allan <[email protected]>
Merge remote-tracking branch 'origin/develop' into sprint18-bugfixes

Conflicts:
components/tools/OmeroPy/src/omero/gateway/__init__.py

1de5efbcb9589e7e6659ac71a00af6338d3ca36d authored over 12 years ago by Chris Allan <[email protected]>
Attempt to fix JDK5 javadoc build error

Error when building a release under JDK5:
{{{
com.sun.tools.doclets.formats.html.resources.s...

e29482031e32d563f541cbe9f6bf6b6e084b6f87 authored over 12 years ago by jmoore <[email protected]>
Merge remote-tracking branch 'origin/develop' into int_vs_long_srv

Conflicts:
components/insight/LIB/ome-io.jar
components/romio/ivy.xml
components/server/src/o...

98db6132ba8040294ddc79748d0c723bcf2d8930 authored over 12 years ago by Chris Allan <[email protected]>
Initial USR1 handler for closing DB handles (See #4210)

a28d4e7ffe1f4df1f28f205393cab8402f2d1959 authored over 12 years ago by jmoore <[email protected]>
Refactor graph critical logic to IPixels (Fix #8818)

RenderingBean.retrieveRndSettings had extended logic
to handle graph critical (i.e. admins) situ...

6175e6e5ab4c386c5392e75b193af343a6ab0e16 authored over 12 years ago by jmoore <[email protected]>
Merge remote-tracking branch 'origin/develop' into chmod_web_8434

Conflicts:
.classpath-template
components/server/src/ome/security/basic/BasicEventContext.java...

665153955f449477e7a632bb39db438192fe87af authored over 12 years ago by Aleksandra Tarkowska <[email protected]>
Handle unknown permissions in -1 context

When the call context is omero.group=-1, the
current group permissions were null. This is
insuff...

aca275b2cb57ac110cb940ff0d0f735cd3cb3cbe authored over 12 years ago by jmoore <[email protected]>
Add capability to interrogate in progress status. (See #8165)

464db8f7ee30eb544dd555496e49e9402bb07a40 authored almost 13 years ago by Chris Allan <[email protected]>
Merge remote-tracking branch 'origin/develop' into int_vs_long_srv

Conflicts:
etc/omero.properties
lib/repository/jai_imageio-362b9a2.jar
lib/repository/loci-co...

6d5f788c001380edfc4eb5feb4ae58a5fa4a7b94 authored almost 13 years ago by Chris Allan <[email protected]>