github.com/ome/omero-blitz commits | Ecosyste.ms: OpenCollective

Merge pull request #39 from jburel/properties-file

Properties file

6f06c9b7a5ad777eaf7158f56c706055fc089f92 authored over 5 years ago by jean-marie burel <[email protected]>

Merge pull request #34 from jburel/test

Test

2a14b9fa4012e05ae652fabed4749d2f129f797b authored over 5 years ago by jean-marie burel <[email protected]>

fix upgrade check

1115b2b8918222ac587841eef17f9a4d7bac2cf9 authored over 5 years ago by Jean-Marie Burel <[email protected]>

add extra line

2fc7df41f98756128371b27d33d77898e7333865 authored over 5 years ago by Jean-Marie Burel <[email protected]>

update doc

7fbe570d920d44b48f5dccffc1be2345d15ccb95 authored over 5 years ago by Jean-Marie Burel <[email protected]>

add properties file

806fa25d34b0710fdd928d06ac60545170818cac authored over 5 years ago by Jean-Marie Burel <[email protected]>

revert to snapshot

1bfe498b86598e37cfc90f377a3d1461e7fc61b2 authored almost 6 years ago by Jean-Marie Burel <[email protected]>

bump to 5.5.0-m5

ee01721b25e21930bbd0d28d7b7e8947a144ce14 authored almost 6 years ago by Jean-Marie Burel <[email protected]>

Merge pull request #29 from jburel/manifest

manifest

69c3cfca5d097333b6e85b2116e78e1bec471611 authored almost 6 years ago by jean-marie burel <[email protected]>

Merge pull request #31 from rgozim/fix/omero-version

Version loading tweak

4a55a50fd11a354079bef735f4d59a8cef03b2d2 authored almost 6 years ago by jean-marie burel <[email protected]>

Merge pull request #37 from mtbc/export-MapAnnotation

Include map annotations in image metadata export.

e45750b1b08ef8e3cc23b7deace19400cc25ea9a authored almost 6 years ago by jean-marie burel <[email protected]>

remove usage of config

81a4000d99dbc1cee0bdd88d18834c055cae2471 authored almost 6 years ago by Jean-Marie Burel <[email protected]>

Merge pull request #20 from mtbc/deletion-order

safely order repository file deletions

6931420f185f0f466dfec99b91c2a0327004fbd1 authored almost 6 years ago by Josh Moore <[email protected]>

Include map annotations in image metadata export.

0b1f2c155277861829f2bcb34d6416481c05d754 authored almost 6 years ago by Mark Carroll <[email protected]>

fix spelling

ffb3e51185d34d0bf54ea33df7a48f678a101bac authored almost 6 years ago by Jean-Marie Burel <[email protected]>

minor adjustment

4c7878ae129b9be6a61a266e9ec7c6d7d0706889 authored almost 6 years ago by Jean-Marie Burel <[email protected]>

minor edit

5d1201b10f1416746f017c5e75fd75a5a97adb5e authored almost 6 years ago by Jean-Marie Burel <[email protected]>

Merge remote-tracking branch 'origin/master' into javadoc

44dbd7d1ab6f4e1409e45fba1ac6c24d79b5980e authored almost 6 years ago by Jean-Marie Burel <[email protected]>

Merge pull request #26 from mtbc/Response-OK

adjust some Blitz API responses to signal "OK"

9442f90865a6c75ee118a1abad237f32e3d053e8 authored almost 6 years ago by Josh Moore <[email protected]>

fix remaining warning

95cc9ae06fd3289f3f51d39a18f737cbdc062a32 authored almost 6 years ago by Jean-Marie Burel <[email protected]>

update javadoc for generated classes

339e184d4e39e3654c2e143c8bc9b4f2587ab6c5 authored almost 6 years ago by Jean-Marie Burel <[email protected]>

Merge pull request #30 from sbesson/license

Add top-level GPL2.0 license

c379fe3e15060c116aaef93babc326eed88e7239 authored almost 6 years ago by jean-marie burel <[email protected]>

run the tests

f1eaee69ff5fdf491abebc0d2cb75d6108ddd59c authored almost 6 years ago by Jean-Marie Burel <[email protected]>

enable tests

555adca2be26e1f1dec2e8f4eb1428254c628988 authored almost 6 years ago by Jean-Marie Burel <[email protected]>

add dependencies to compile

84f1d23ed59eae6c5d6fe198eac386a1b428f2cd authored almost 6 years ago by Jean-Marie Burel <[email protected]>

Update tests to compile

33cc0902e556e6bf7ac45e6b6f535f1d92a4d0ae authored almost 6 years ago by Jean-Marie Burel <[email protected]>

Merge pull request #28 from mtbc/fix-Hibernate-XSD-URL

Update Hibernate DTD URL to current recommendation.

852f5194f1dcfdeea1ed7a96d5ca6794bbd16e73 authored almost 6 years ago by Josh Moore <[email protected]>

Merge pull request #32 from mtbc/fix-FS-API-comments

fix comments in FS Blitz API

5fe120cf860235d16ef2f24c32f9b487d2067124 authored almost 6 years ago by Josh Moore <[email protected]>

fix OriginalMetadataRequest to /not/ extend OK

65488a7c9feadc57a2b3f1733eab6114ca9e6187 authored almost 6 years ago by Mark Carroll <[email protected]>

Merge pull request #19 from mtbc/log-FS-deletions

add DEBUG logging for successful repository file deletions

d646e38364277d5549f8e9a202397c5ad62e4b51 authored almost 6 years ago by Josh Moore <[email protected]>

Merge pull request #18 from mtbc/deprecate-dataprovider

deprecate vestigial data provider for deleted test

61f16cefa9ed38fc738d312021909c1fb128bfa5 authored almost 6 years ago by Josh Moore <[email protected]>

Merge pull request #17 from mtbc/case-sensitive-typo

Deprecate setCaseSentivice in favor of new setCaseSensitive.

ec3ecab9acc127e71c674ae816b43dea66b596da authored almost 6 years ago by Josh Moore <[email protected]>

Remove commas after parameter names in @param doc tags.

Targets FS API.

fb450aea0b46dc4403dc6af0b5454d076cd278cb authored almost 6 years ago by Mark Carroll <[email protected]>

Remove useless @return tags from void methods.

Spotted by @joshmoore.

aefd1f2632c7f63533448f6d98f00a2ae99867f6 authored almost 6 years ago by Mark Carroll <[email protected]>

fix @return doc tags

eca3d7e30ee3028cdb507a7a6c38fabdb05d211b authored almost 6 years ago by Mark Carroll <[email protected]>

Remove useless comment header.

89065fe9cf18b0eca5d2d9c8459ff71756eedd28 authored almost 6 years ago by Mark Carroll <[email protected]>

Version loading tweak

Replaced ResourceBundle omero.version with version in jar manifest
Updated gitignore

66e8cbc21816f0355078cf009668ca6f2e358d0c authored almost 6 years ago by Riad Gozim <[email protected]>

Add top-level GPL2.0 license

0a02bb905f5e42d2290098e62a2c4bb3613d6dce authored almost 6 years ago by Sebastien Besson <[email protected]>

Merge pull request #22 from mtbc/LegalGraphTargets.request

LegalGraphTargets can work for any GraphQuery instance.

011c98a8fd2e1836d9232476be8a0e7b04149a6e authored almost 6 years ago by Josh Moore <[email protected]>

add Main-class to manifest

d0630bd9401bfebd263ce9bce277e638a189e79b authored almost 6 years ago by Jean-Marie Burel <[email protected]>

Update Hibernate DTD URL to current recommendation.

056cecd4d0881fbd7f497ef02595d2329a9de6e3 authored almost 6 years ago by Mark Carroll <[email protected]>

Merge pull request #25 from mtbc/import-target-canLink

fix "cannot link" bug with import target containers

c1d2881fe5e0cea3833fa8e484dc495247312d98 authored almost 6 years ago by Josh Moore <[email protected]>

Revert back to SNAPSHOT

9f91b02a4c009224ed51f1ec34c396533f68bf0b authored almost 6 years ago by jmoore <[email protected]>

Merge pull request #13 from rgozim/m4

M4

0ffd8374eca180dc1fc872edb70d07d37207024c authored almost 6 years ago by Josh Moore <[email protected]>

Resurrect libzeroc installation

ca7ad87fc85faab793c061ec1396f710e64d7e0a authored almost 6 years ago by jmoore <[email protected]>

Bump to m4

0cd2116d4be930adf01dedced5be5879973af48a authored almost 6 years ago by jmoore <[email protected]>

Updated build.gradle to enforce task ordering for python code gen

0075c3b549f030c0111e795047fae09e1b91d716 authored almost 6 years ago by Riad Gozim <[email protected]>

Drop gradlew

c295ce2d715245f0387292b4a9e4becba823723a authored almost 6 years ago by Riad Gozim <[email protected]>

Merge pull request #27 from mtbc/GraphModify-references

Remove from comments confusing references to OMERO 4.x code.

c74dff1b5158bbf3ff76a5d6a9c6677a74cffe7b authored almost 6 years ago by Josh Moore <[email protected]>

refactor server template import target

Avoids unnecessary query and reduces duplicate code.

bca72c13a3ad897fc6844fbdf71e838356142190 authored almost 6 years ago by Mark Carroll <[email protected]>

Merge pull request #21 from mtbc/move-OMEROImportFixture

Move OMEROImportFixture into test directory.

515a947301ae2564fbced15f016ce6da48141b39 authored almost 6 years ago by Josh Moore <[email protected]>

reformat import target query code

whitespace only

5dfbacbd5b00957eb6507b4369dbc7e4fc0e1746 authored almost 6 years ago by Mark Carroll <[email protected]>

avoid unnecessary import target query

suggested by @joshmoore

6045aaba9341055460b3c008db5b47a367566c1a authored almost 6 years ago by Mark Carroll <[email protected]>

Merge pull request #24 from mtbc/remove-pixels(path)

remove Repository.pixels and deprecate BfPixelsStoreI

330a17f8ba06098b14463be0b856f786f3bb5230 authored almost 6 years ago by Josh Moore <[email protected]>

Remove from comments confusing references to OMERO 4.x code.

c336f445f0f1d0b8e6ec67d04c1bc03e8a1220e5 authored almost 6 years ago by Mark Carroll <[email protected]>

adjust some FS responses to extend OK

c80965e922a586fd3424f3eea3f4da93e32a5159 authored almost 6 years ago by Mark Carroll <[email protected]>

adjust a couple of Admin responses to extend OK

813776108e53f2da83d7b0d8a13f95dfeffc4368 authored almost 6 years ago by Mark Carroll <[email protected]>

adjust Graphs DiskUsage2Response to extend OK

c3fc0d0523e39e5063917b24e5fe583d1726dc61 authored almost 6 years ago by Mark Carroll <[email protected]>

adjust Repositories ImportResponse to extend OK

c6d61493dedde262a74bf3dec5ee6495df48cf6b authored almost 6 years ago by Mark Carroll <[email protected]>

trim header comment

f0c8b859d776ca806a64edd3d60a82f19293411e authored almost 6 years ago by Mark Carroll <[email protected]>

use StringUtils.isBlank, clearly matches intent

f3689d671f714196a7e845d732fc03b4ea62472f authored almost 6 years ago by Mark Carroll <[email protected]>

use List.isEmpty()

07410efa2b6b984dc26e0e595a6f6ad96231c371 authored almost 6 years ago by Mark Carroll <[email protected]>

Consider only the import target candidates that canLink().

821feb4df95910a7fac5e591fd7ebc63f4512b8e authored almost 6 years ago by Mark Carroll <[email protected]>

Merge pull request #23 from mtbc/client-SSL

Java SSL fixes for clients (rebased from metadata54)

1ce1daded57c6f71b30ba4b42e1cdcc5b7555fef authored almost 6 years ago by Josh Moore <[email protected]>

deprecate BfPixelsStoreI

unused, untested, complicated

8e8abca6d13937627668746e32f1c23b0d22f13f authored almost 6 years ago by Mark Carroll <[email protected]>

remove omero::grid::Repository::pixels

was deprecated in 5.4.6

00648c9fac16e8bf12850f3a54853ee1631b1ae6 authored almost 6 years ago by Mark Carroll <[email protected]>

Initialize omero.client before doing upgrade check.

Allows adjustment of jdk.tls.disabledAlgorithms to take effect.

1006aafbbea506fcca2509df917653c6ec45aea3 authored almost 6 years ago by Mark Carroll <[email protected]>

Java client init: no "anon" among jdk.tls.disabledAlgorithms

JDK-8211883

a9a5a85afe0a8ec4f5867000fc65a46c609bf0ae authored almost 6 years ago by Mark Carroll <[email protected]>

LegalGraphTargets can work for any GraphQuery instance.

7fe855200d75043d9fb20c7c9a39dcd3af3c0c19 authored almost 6 years ago by Mark Carroll <[email protected]>

Move OMERO import fixture to among test code.

3c35df734d46cc144a21ba6efc505713356f7f6a authored almost 6 years ago by Mark Carroll <[email protected]>

Added publish.gradle (revert)

67201864993a030b95a74f79e8b29d778a0c94a4 authored almost 6 years ago by Riad Gozim <[email protected]>

add DEBUG logging for successful repository file deletions

02463f9ac89d3a51aa6065ae37bcc2d0601d7ba3 authored almost 6 years ago by Mark Carroll <[email protected]>

deprecate vestigial data provider for deleted test

09365439622cad302a1b9f14b1a4e32ffef301cd authored almost 6 years ago by Mark Carroll <[email protected]>

do not use GraphUtil.arrangeDeletionTargets

8e7b2241db567aed6862ac79fd57e1796b3f0e4a authored almost 6 years ago by Mark Carroll <[email protected]>

deprecate arrangeDeletionTargets as no longer required

c4a59498533ea747bb3449534f32e259f531d852 authored almost 6 years ago by Mark Carroll <[email protected]>

Updated build.gradle to use publish.gradle (revert)

a8cbca229babe421ee01709ab4bdd10979f68c94 authored almost 6 years ago by Riad Gozim <[email protected]>

Search facility should use non-deprecated setCaseSensitive.

c6a7d376f60fec09d01d53af5c48a215285ddce7 authored almost 6 years ago by Mark Carroll <[email protected]>

Have SearchI implement new setCaseSensitive method.

a0e8ff65208994841ff571636b42ce47a2f764b6 authored almost 6 years ago by Mark Carroll <[email protected]>

Deprecate setCaseSentivice in favor of new setCaseSensitive.

Relates to the Search API.

a2fbb85c318f4a032cf0ad56ad7424a33e566609 authored almost 6 years ago by Mark Carroll <[email protected]>

fix conflict

bcd6bc198f00a9309f912796ea7c71741c779b42 authored almost 6 years ago by Jean-Marie Burel <[email protected]>

Merge pull request #15 from joshmoore/5.5.0-m4-SNAPSHOT

Move back to 5.5.0-SNAPSHOT

45e4f7a2b737ea6adb055338a60fe519beb28796 authored almost 6 years ago by jean-marie burel <[email protected]>

Move back to 5.5.0-SNAPSHOT

974e42b3795fc858b65ad5d937da536a54db48af authored almost 6 years ago by jmoore <[email protected]>

Moved omero artifactory url to project plugin

39a30b4da0a6b92fc5108855d7cac18a149fc3c2 authored almost 6 years ago by Riad Gozim <[email protected]>

Added project plugin and removed publish.gradle

Corrected output dir of generated files and updated gitignore

43a61fce37cf03c8d791ca3a9507dfc9b9e3c7ad authored almost 6 years ago by Riad Gozim <[email protected]>

Added artifactory publish block

b5db339d5875238825be728fb26c1dca0906f639 authored almost 6 years ago by Riad Gozim <[email protected]>

deploy on tags

597a8fc270df02c1f721fd6617ab884f4d0d9297 authored almost 6 years ago by Jean-Marie Burel <[email protected]>

do not build javadoc

fdcdbced69c9363e2cc404cfd3cb013b96c26f53 authored almost 6 years ago by Jean-Marie Burel <[email protected]>

exclude test and javadoc

3d6f9c0bed5fc0dd36dff110725f1ae38834b8ea authored almost 6 years ago by Jean-Marie Burel <[email protected]>

install slice2py and create symlink

366f066e5ee0bac4c1976842c337c1749e6b3896 authored almost 6 years ago by Jean-Marie Burel <[email protected]>

add plugin

c34d77778c4776bd732c92689b0ce532f58f1463 authored almost 6 years ago by Jean-Marie Burel <[email protected]>

change version to m3

bd92e83f8813f3f3a47fec649fa5f054fa2dfaca authored almost 6 years ago by Jean-Marie Burel <[email protected]>

use published jars

db8d4f5ac369c1e04ab935143fb22e7cb2816b8f authored almost 6 years ago by Jean-Marie Burel <[email protected]>

add travis

615216654488b378227e88c42f80b661b81b7328 authored almost 6 years ago by Jean-Marie Burel <[email protected]>

add repo to deploy

51ad620f2649042af83df13a2d8ac916ac586e50 authored almost 6 years ago by Jean-Marie Burel <[email protected]>

Decouple openmicroscopy/openmicroscopy for 5.5.0-m3

Squashed commit of the following:

commit 1dea6f8397bd131f1cfbe7bbd8d315df8944c3ed
Merge: dba631...

b6957e1eb53e999989c03d389fdfc175bd9091e8 authored almost 6 years ago by jmoore <[email protected]>

Drop encoding

726ec522d21d7bea30c6139964636dca2ee2c848 authored about 6 years ago by Jean-Marie Burel <[email protected]>

Remove Ice 3.5 configuration settings

332abf2984623c62c5d179ffce1747836aa5a43a authored about 6 years ago by Jean-Marie Burel <[email protected]>

Mark submitted graph requests for background processing.

947876fdd6643fd9193e5e6c6923bf54b27dd939 authored about 6 years ago by Mark Carroll <[email protected]>

Merge pull request #5904 from sbesson/dynamicmetadataoptions

Replace all usages of DefaultMetadataOptions by DynamicMetadataOptions

bc129e88e15114e5174bb0ce562b4db0f353186e authored about 6 years ago by jean-marie burel <[email protected]>

Merge pull request #5897 from dominikl/maskdata

Added some convenience methods to MaskData

6f747a53d691ee920bf662e8975670e0ca417e41 authored about 6 years ago by jean-marie burel <[email protected]>