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github.com/orcasound/ambient-sound-analysis

This repository holds code for UW MSDS capstone project analyzing ambient sounds in Orcasound hydrophone data
https://github.com/orcasound/ambient-sound-analysis

Merge pull request #55 from orcasound/vai-zach-merge

WIP: Merge mathematical logic and infrastructure improvements

50448656ba1c921b8e81efad16b9ff394b94499c authored 11 months ago

rotating xticks in plot

1c2d7bb630c1e4ba9de62ecb5f88193e7367dc4c authored 11 months ago

spectrograms and graphs -> spectrograms and time series plots

bb10235cca44c7ab735eaefa6283b16720c0c06f authored 11 months ago

Update README.md

adding github installation instructions, and some quotes to improve reading of functions

dc5a150c5be1d57a30f79f102d72aca0bb11d05a authored 11 months ago

chore(): Cleanup and att github/linked

73b0c5f4bb93a1f894e445b35ddb9cdd96a6db22 authored 11 months ago

add references

71f8fdec6d9e237281462eaa38f06825eb0cbcae authored 11 months ago

Updated broadband image in the README

3307ffebe6ee4cad33b8672a03aad986270f933a authored 11 months ago

Added a broadband graphing function

005eeed71402e1d8b93669a0d361e4b8abfc61ef authored 11 months ago

Adjusted image size in README

b09112f27f921c0bbaed8146d96be838918b6012 authored 11 months ago

Delete pages/doc_images/readme_spec.png

8592cc7b47bb2ced44b99f8d45f3fcb141cd7710 authored 11 months ago

Delete pages/doc_images/readme_bb.png

9e7189ee04e1c9e429c966d174e72a693e21af0a authored 11 months ago

Added images to the README

b3e4595fadf1feecda481a3c63333707048b84ed authored 11 months ago

Adding readme images to the repo

e35724280d73a02dc39043143fa3b5d10282a066 authored 11 months ago

Documentation- Added to the README, pipeline README, and in-line commented

093fdbdb3cbc311e7d0c9fe6781c6df223d103f1 authored 11 months ago

Moved Tim's tutorial into the README and added a pipeline overview

fe39a8741c46f3f12917913bc520791cc43331a2 authored 11 months ago

add tutorial

11b2fb0b091747c43ef93d262a7b8e386dbd21b3 authored 11 months ago

fix(pipeline): Remove pqt_folder argument

b21f4d3b04fb75b694aeb5ce3d3bbbb639238ee8 authored 11 months ago

feat(pipeline): Destroy objects to free up memory

3f965130246cc9df658906cb76d1f71a998b4ed9 authored 11 months ago

feat(visualise): Update viz script to use Zach's test_3

9edfedafbda765838721679f8169945c2d2ebad0 authored 11 months ago

Merge branch 'fix/vm_downloads' into vai-zach-merge

dd040619584da0d7bde5026d7a1d1b96ab6f2aa1 authored 11 months ago

requirements: Fix pandas version

8031707f7a9ccacc15807c621e2df2134244aa94 authored 11 months ago

Prep for prod

8f8147b315e7fe21669a0e61002d050223f197ca authored 11 months ago

src/orcasound_noise/pipeline/pipeline.py

d1608bae873391ab3cac7e9d32c90154e66df606 authored 11 months ago

fix(cost_analysis): Change to port townsend:

3e687a27421452ee0d0b40974b90e534f2fff744 authored 11 months ago

debug(pipeline): Fix timezone

d4f37c7b96624ba8c41e2e565b0201f032564263 authored 11 months ago

debug(pipeline): Fix timezone

a49d6cfd84a9e8fb6c713c760873e33f8108928c authored 11 months ago

debug(pipeline): Fix timezone

ac22ffb3883f80168dae2f4c30ee02c221546611 authored 11 months ago

debug(pipeline): Fix timezone

797b1001c8297ff894495a885567c68322025221 authored 11 months ago

debug(pipeline): Fix timezone

91ef4cad95e1c05774f70db058f1d0dbccbf3682 authored 11 months ago

debug(pipeline): Fix timezone

dde5e9de475a0e02ff28817fc7079a9741fb0c9a authored 11 months ago

debug(pipeline): Fix timezone

a022a089e20ce3093b5e35d75a86b0be00b5797c authored 11 months ago

debug(pipeline): Fix timezone

4249b068ec0bf17debb7f715a67eb9b001264af3 authored 11 months ago

debug(pipeline): Fix timezone

80748606f69ad2a2a6254c7a7f7886ec2effe8c7 authored 11 months ago

debug(pipeline): Add debugging counter

a10c25f72b222f8b0a0830cbbda48525d21dbf60 authored 11 months ago

debug(pipeline): Add debugging counter

d5767092960847a1646d55b7f27d3f18de98d2b4 authored 11 months ago

debug(pipeline): Add start and end time deeper

dda3ff2e97b9ac301c7f072d87c0e7ff15d5885b authored 11 months ago

Removing pipeline_3

0494d3d8ddc78348f63b7137aac775c58e7ec6ba authored 11 months ago

debug(pipeline): Add start and end time

3825babaca010324665c34e3300672895c4a1bac authored 11 months ago

fix(test_3.py): Remove hard-coded paths

8d5b0191e27bb4b62b6b6b38d026bbce240c3ba5 authored 11 months ago

feat(test_3.py): Add time benchmarking

99f687f9bc75e848f1d68d9c87b64f257fe0687a authored 11 months ago

Adding updates to acoustic_util, pipeline, hydrophone

2ab105ef3c00498dbba64e01acd9f4fbac940064 authored 11 months ago

debug(cost_analysis): Add shape to debug

6586069259f200ffb0b4829b36a87a940d69741f authored 11 months ago

fix(utils): Fix format

2780b6005022445ba3c8a5feb20027f4d0c0c9ce authored 11 months ago

fix(utils): Fix format

e32eb4250f49aa9323f33d366cf076785833fa47 authored 11 months ago

fix(utils): Fix format

42d0d1234c464247fb8ab28f899adfb2eccc58f9 authored 11 months ago

fix(utils): Move typecaasting one level down

924285ad5d90851016ce1b15aedb0a761c8f1182 authored 11 months ago

fix(utils): Move typecaasting one level down

b3c31dbf94baff5f6ebe8e2fc0893cc06cff94d4 authored 11 months ago

refactor(utils): Add duration to logging

37de82e2288cd1e5ebb65786885158a816e0011e authored 11 months ago

refactor(utils): Reformat logging

2722181515b2ac96c7e817ccef7be5f057c4586f authored 11 months ago

fix(utils): Change logging name

21307b5e2e8d433aa3b2d5fb209640b1580af2f8 authored 11 months ago

feat(utils): Add Cost analysis and logging script

f71f4fda90d862aea642dd4ccb7b6ad24c25f915 authored 11 months ago

feat(utils): Add simple visualisation pipeline

a8fee822ea4dd7b183ccfd749c558c662f5f9591 authored 11 months ago

feat(pipeline): Add safe and fast mode functionality

e57a20c3ba6e4f7bb5ec44e6ed6303d14b78f888 authored 11 months ago

feat(pipeline): Update generate_psds to accomodate multiprocessing

8a0eb2ee53e075f185124efdfcc67557b26931e3 authored 11 months ago

refactor(acoustic_util.py): PEP formatting

2ab433e42150acb58dc99cccad9fb895e9169e29 authored 11 months ago

feat(requirements): Update hls-utils to use parallelized version

c6f680b3cce66f02cc5e780e4eff84b019be1155 authored 11 months ago

Pre-compute daily trends

c51dbf6067024708ae10aee5af20d7f6cf783da0 authored almost 2 years ago

Merge branch 'main' of https://github.com/orcasound/ambient-sound-analysis

3a41c56214458aa38a5d9a7cf46b064303837ec3 authored almost 2 years ago

Add dashboard readme

6f3362504b402b8245ae1d206251625395e965aa authored almost 2 years ago

set default ref to aa, smoothed comparison, set spec y-axis to log

43d5ffe71531d354cfd01b9f626e573f0ad868bc authored almost 2 years ago

adds linkedIn link to Readme

59cb84a1b845172337e4238118b5adf9b74d20ae authored almost 2 years ago

Links aws_batch Readme.md within primary README.md

ca2769900a952ea1ba972418b01ed383b43ec0bd authored almost 2 years ago

Updates Readmes and additional documentation

09b0a63fe9f1bb6d8565e885040ae7ebacc72aff authored almost 2 years ago

updates to README documents

7a8e4a8f2af5fd8e5e274a9f90049583e47aba72 authored almost 2 years ago

start to update readme

bfc52e6ad419e4f907fb81eb45de8257e7e6c443 authored almost 2 years ago

Convert to multipage

80b17a71dd64dd9bc560d96e9a691c4e1c7892c8 authored almost 2 years ago

Disable trend line on daily noise

a6b879834e5a534ee9064033ab2757b770135551 authored almost 2 years ago

Default daily_noise to 7 days

3c6ede4a7a19b1cd83bb7d3439d4141eba15236f authored almost 2 years ago

no_sign option on dashboard for pipeline

d469cd2e2913b5bb828998a6ba0e67f21c3f824f authored almost 2 years ago

Merge pull request #27 from orcasound/dashboard-tabs

Dashboard tabs

8e8a4cc9a97b0f87c1713500a3f555b274ae972f authored almost 2 years ago

added dB, AA scaling to all tabs

a13f5befcfe9fbbf6c0917526bdb6c6e8b0cce60 authored almost 2 years ago

Daily dashboard fixes

fa63b4ed71e46fb75aaac9543f7fca4c0f755d12 authored almost 2 years ago

Ignore all .venv files

69ed70e249366433a6eb4e0c38d5481c9b63f773 authored almost 2 years ago

Merge branch 'main' of https://github.com/orcasound/ambient-sound-analysis into dashboard-tabs

d5372249bdfc7179f3c2da6c9a7a9dd889e275d4 authored almost 2 years ago

cleans up import statements

d45c9b4e2e7baf21610e4d75bf1fba9781700151 authored almost 2 years ago

updates third tab to be broadband comparison

c1893bff73c10a17c47a4d451da597b5071317b9 authored almost 2 years ago

updates accessor

f5638e578ae146e9cba87f2645dd554ced2e2188 authored almost 2 years ago

updates dashboard_3

24235e95a638aeff6799ad7b3bad10cdf1eeb2b1 authored almost 2 years ago

allows for passing **kwargs in daily_noise

"merging conflicts"
"handling merge conflicts"

d4f3beaee08a8ec958cf495a6cdcd4904e31bbea authored almost 2 years ago

added ambient scaling, dropdown constraints

1ca9f8bc258d100ae6183c1dce3809ca20613252 authored almost 2 years ago

updates docs

4997572acf71ce2e88c8039686fef6820e1916e1 authored almost 2 years ago

changed default dates

2ce9ccdcae01b0128970fa2900bde0d64eb9e9b0 authored almost 2 years ago

updates ec2_batch

f4a8e89f2021a74353209a913dace1d99fe0cae5 authored almost 2 years ago

minor documentation update

f1726023cf5f96a89891a9965750f08994e61eb3 authored almost 2 years ago

updates documentation

74562e3230076dadd3305cb16d450f84acc3880a authored almost 2 years ago

Merge pull request #26 from orcasound/documentation

Documentation

5a48923f2087fd08f8c12bb51fb830a534254d13 authored almost 2 years ago

More links and deatils on utils

bc3faa70b36ca628bdfeea3053ca9cca3d4d625c authored almost 2 years ago

Move readmes to new nested folders

f943a76c3f4eb49e63ceb90053121ac1372408e5 authored almost 2 years ago

Merge branch 'main' of https://github.com/orcasound/ambient-sound-analysis into documentation

ef6656afb6b54fd56d45204fd0d3b6e329b431f5 authored almost 2 years ago

Merge pull request #25 from orcasound/install_config

Install config

488659ffc42165e62e8abddf49d37513a260cec7 authored almost 2 years ago

Quickstart instructions

ff4fe4f8b53304aee91924833ad9c57b5956fe27 authored almost 2 years ago

Add setup files

0a67b261ec85fe15a9e5b655cd813871e597e3a1 authored almost 2 years ago

Restructure into single package

1b7952cb4020fd0a62e6a9357968759e711c1cdb authored almost 2 years ago

Add sub-folder readmes for more depth

a0c9a5c693a07e0cf5239ecc2a8dbbbe70989959 authored almost 2 years ago

adds ec2_batch code

d2640ad34a0b3e1265305b53a96ae44333e89d8f authored almost 2 years ago

Merge branch 'main' of https://github.com/orcasound/ambient-sound-analysis

fff52ede2cd504602cfc5bb3c862fd829fb14d0d authored almost 2 years ago

Update to point to fixed hls repo and handle none results

9c6a761ca657216d68808f4098e492ffeb73c7d4 authored almost 2 years ago

Added Readme attributions

2baab708c8e1aa6a0233c118fe0ee967864d664d authored almost 2 years ago

Smaller daterange dashboard defaults

eabf0f3825e172ff51fdcdc594d84fbbcfe29e21 authored almost 2 years ago

Fix plotly

4674150fc895cc36501edd118f1f8d36bc14bf1e authored almost 2 years ago