github.com/ome/ome-model commits | Ecosyste.ms: OpenCollective

Move to use primitives for NonNegativeInteger, PositiveInteger and PercentFraction. Re-run of code generation (ome-xml:r557).

55f49192bfe82bc64a0118ef83dbd5faa980328e authored over 14 years ago by Chris Allan <[email protected]>

Move to use primitives for NonNegativeInteger, PositiveInteger and PercentFraction. (Closes omero:#2226)

dee875908ff16f591df25b4bf4185db748ea4ac1 authored over 14 years ago by Chris Allan <[email protected]>

Changing documentation to say the annotation collection is unordered

a52ab1a0712165c29eaa58b7444f74b095f082eb authored over 14 years ago by Andrew J Patterson <[email protected]>

All tests passing. Re-run of code generation (ome-xml:r554).

83149bfc0c0b7c57bb6e29eef36d4a1ea04fa492 authored over 14 years ago by Chris Allan <[email protected]>

Correct DOM tree traversal that only applies to the next level (just the element's children) and not the entire subtree.

204f52fc9f52fb076b0c5473057e4caf250e6357 authored over 14 years ago by Chris Allan <[email protected]>

Annotation is abstract not abstract-proprietary.

5944a0c27461ab75a005ba5e271adae3fb86947f authored over 14 years ago by Chris Allan <[email protected]>

Re-run of code generation (ome-xml:r552).

45b69eba1a701d585cad5244e88b770dce2ded34 authored over 14 years ago by Chris Allan <[email protected]>

Better support for non-complex, non-string elements.

775d97168711f07e67b58c703a7a6168a9686094 authored over 14 years ago by Chris Allan <[email protected]>

Committed missing custom template for Reference.

84d8d7a847dec753f31249fcd27a6f9964114e0b authored over 14 years ago by Chris Allan <[email protected]>

Proper support for choice driven cardinality resolution.

f075fc75deaef0e2a86cb68cdb03a4a7fe210b71 authored over 14 years ago by Chris Allan <[email protected]>

Fixed a bug that was causing incorrect type resolution for elements with data.

8a9461840b0461aea20a99584820b6dee1b1018f authored over 14 years ago by Chris Allan <[email protected]>

Fixing typo in capitalisation of attribute "origin", now "Origin".

d80cb3a2a8c64edc40c8e453f1b71463b9b11937 authored over 14 years ago by Andrew J Patterson <[email protected]>

Fixes to MetadataStore generation.

da66d430c0acc35d155af13f1e3e3c04f787efd7 authored over 14 years ago by Chris Allan <[email protected]>

Re-run of code generation (ome-xml:r544)

2e3345de81c2b23ed7327a5be8d3457d38c16f68 authored over 14 years ago by Chris Allan <[email protected]>

Fix proprietary abstract type instantiation from a DOM tree.

000b6a7640c799c2cc7e0852acc4bca1c8addb02 authored over 14 years ago by Chris Allan <[email protected]>

Re-run of code generation (ome-xml:r543)

b06b29ff9b09253ed4803591385e0e3ce2939d48 authored over 14 years ago by Chris Allan <[email protected]>

Fixed type names of certain references on export to DOM.

b35cee42e3493c35aca4ee6ccdc4f818d8caa6c8 authored over 14 years ago by Chris Allan <[email protected]>

Re-run of code generation (ome-xml:r542)

f367013cf453797e48dda6688fbbeb635f92c0b7 authored over 14 years ago by Chris Allan <[email protected]>

Fixed some update method semantics and order of proprietary abstract type instantiation.

7dd71077a4ca6bb2b0c90f05e4350b6c495bd828 authored over 14 years ago by Chris Allan <[email protected]>

Re-run of code generation (ome-xml:r541)

b099a74a30b78e914e9a5cbe3f52fd50ea92580d authored over 14 years ago by Chris Allan <[email protected]>

Feature to allow custom content for each class.

d4d8e72f9d62b2122ecf0fd3061d9f712955d398 authored over 14 years ago by Chris Allan <[email protected]>

Re-run of code generation (ome-xml:r540)

bcef396d65e14f626f23b286a3dde33c0e25e2ed authored over 14 years ago by Chris Allan <[email protected]>

Feature for disabling back references where they do not make sense.

95b5b34317dc3c9879e1a56b9e23a7e48629b336 authored over 14 years ago by Chris Allan <[email protected]>

Re-run of code generation (ome-xml:r539)

5ca9280188f0fffde59fe8a005a32010e70218a4 authored over 14 years ago by Chris Allan <[email protected]>

Updated to handle abstract-proprietary.

fa86db71ac4899ccd00a6ee3b554cd82f378ef66 authored over 14 years ago by Chris Allan <[email protected]>

Fixing typo PlateID/ScreenID and undoing change to sample file

90f76c4eea2279157f5ad5fd75abea5835940536 authored over 14 years ago by Andrew J Patterson <[email protected]>

Removing ReferenceWithID and adding abstract-proprietary

8ec806b7bfe586d7fda7e0a9510105ebce991e6b authored over 14 years ago by Andrew J Patterson <[email protected]>

Foundation for reference handling support. (ome-xml:r536) Fixed a few issues with the test case and added some model object and reference dumping information.

ee8aaa77183e724d21328e1aa73d91a2108933b1 authored over 14 years ago by Chris Allan <[email protected]>

Foundation for reference handling support.

d80a60bbf69fe063ee49b86294dcf3014af6428f authored over 14 years ago by Chris Allan <[email protected]>

Fixed some typos.

c7b044938c2dbe20213d896a7964903200403ceb authored over 14 years ago by Chris Allan <[email protected]>

Added a few more Annotation test.

f15b0a0e1df5716ddadf53178819e39fa4ebec9d authored over 14 years ago by Melissa Linkert <[email protected]>

Re-run of code generation (ome-xml:r527)

c26aabb3c6f7c6ffe170cec5619d98f7ac6f828f authored over 14 years ago by Chris Allan <[email protected]>

Fix namespaces on references.

e0edd00fbdb9ca51e1991440d41b748e65d605cf authored over 14 years ago by Chris Allan <[email protected]>

Re-run of code generation (ome-xml:r526)

17ac4fe1a980e20846b9c02b0adfc23e821684d4 authored over 14 years ago by Chris Allan <[email protected]>

Handle singular references correctly.

5bbd7c11e26a406bb2b4a20e8b8df8b4954902f8 authored over 14 years ago by Chris Allan <[email protected]>

Add support for binary file schema. (ome-xml:r525)

207180e9c733a6bf053f9582bb25df38b6d9fcef authored over 14 years ago by Chris Allan <[email protected]>

Add support for binary file schema.

14b334bbcb735db7f264d967b80aea6c25875f55 authored over 14 years ago by Chris Allan <[email protected]>

Re-run of code generation (ome-xml:r525)

7a8f209ec6a60f4ff45b68340b77e6dd268d6e7d authored over 14 years ago by Chris Allan <[email protected]>

Fix recursive references.

0a8865ffdd872dc239a8fd606183165ff96d6e20 authored over 14 years ago by Chris Allan <[email protected]>

References going OUT. (ome-xml:r523)

276c13b9ba2fa172d6a8a085e9285e32189b16bf authored over 14 years ago by Chris Allan <[email protected]>

References going OUT.

ce71c9230ca542a30be5a1f7cd7b89b02c6d3e1c authored over 14 years ago by Chris Allan <[email protected]>

Added a few Annotation tests.

11ef432ba83cc5456cf260a3c29fd89b9fc5f561 authored over 14 years ago by Melissa Linkert <[email protected]>

Re-run of code generation (ome-xml:r522)

19584f12c816524fcfc0d88b53c573a155da4301 authored over 14 years ago by Chris Allan <[email protected]>

Use the constant.

058fa2c850326d6cee8e549d70ea870aee887717 authored over 14 years ago by Chris Allan <[email protected]>

Updated with extended test case and namespace support (fixes SPW, ROI and SA element usage); ome-xml:r521.

2793b5f471f5040e6d9e96a2f2cfef26fda2ba7e authored over 14 years ago by Chris Allan <[email protected]>

Enabled namespace code generation support for elements.

acdc0a19b880fd2dfc5d00390eb48e603f4e378d authored over 14 years ago by Chris Allan <[email protected]>

Better debug main().

c2f41e42afca6b3e8de0e7ffd6f7873014ae9b0c authored over 14 years ago by Chris Allan <[email protected]>

Fix up Eclipse classpaths:

* Use build-eclipse instead of build/classes to avoid compile clash with Ant.
* Include TestN...

55fd00d5319cbb73c0a7db509a70550da099e516 authored over 14 years ago by Curtis Rueden <[email protected]>

Few more OTF properties (critically no objective settings) to add to schema conformance.

518b9e3ec9a2638ed2d176e5f013fb4c5713a913 authored over 14 years ago by Chris Allan <[email protected]>

Adjusted test case dependency slightly to get a little better coverage until we fix references.

e59e691287a1b74e899958146e0abc1072fb6d03 authored over 14 years ago by Chris Allan <[email protected]>

Added tests for Dichroic, Filter, FilterSet, and OTF.

d417524406b836cdbbaf8d9ffd2b36003e852c6a authored over 14 years ago by Melissa Linkert <[email protected]>

Updated with new code generation. (OME-XML Subversion revision 518)

d79561042a76c5b4f4fdb255a2c2eab48743b739 authored over 14 years ago by Chris Allan <[email protected]>

Valid XML both in and out with respect to abstract type handling.

d2218a1b0184bc1bb6f1e636a63dedf7a9008349 authored over 14 years ago by Chris Allan <[email protected]>

Removing the abstract marker from ManufacturerSpec.

89d22a6b94b6a830a48228e40fb66b52e2a35c07 authored over 14 years ago by Andrew J Patterson <[email protected]>

Applying changes from working copy.

ce4391aa9d2c7f22b79267fb49e67be0439d5a3c authored over 14 years ago by Andrew J Patterson <[email protected]>

Adding folders and html pages for live version of schema files.

516d7fe5ab4ef859ec72689b2a2dcaa2024670e6 authored over 14 years ago by Andrew J Patterson <[email protected]>

Passing tests for <Detector/>, <LightSource/> and its sub-classes. Type hierarchies should now be handled signficantly better. (OME-XML Subversion revision 513)

c17b60b7650ba264c8b7105eda8820ac0d459f37 authored over 14 years ago by Chris Allan <[email protected]>

Proper handling of abstract type hierarchies and class hierarchies during "import" from an XML DOM tree.

22e8b4d5ce9f7241484aadc0413a0f363e45f000 authored over 14 years ago by Chris Allan <[email protected]>

Marking ManufacturerSpec as abstract for codegen.

99e3b1593a82f07eb5550b8664c07e29308539ce authored over 14 years ago by Andrew J Patterson <[email protected]>

Do not check the element type for an abstract type.

f17ccc191f1482b5202998b80a085ad6785385f8 authored over 14 years ago by Chris Allan <[email protected]>

Added a couple of object linkage tests. Note that Detector creation currently fails, so all tests are skipped.

09e3bf3ddc3a84ef424f422506b91a3f647d1d79 authored over 14 years ago by Melissa Linkert <[email protected]>

Updated to new infrastructure. (OME-XML Subversion revision 510)

7b89ecf5cdef97a6e02e9dc9329ba699577ca16d authored over 14 years ago by Chris Allan <[email protected]>

Updated to support constructor and type hierarchy based infrastructure.

266e4af5074863e8839f9bc4c46823d17e278e82 authored over 14 years ago by Chris Allan <[email protected]>

Added ROI population test.

6d181ac8418f9e1c32ba98a136fe9a451f8550f5 authored over 14 years ago by Melissa Linkert <[email protected]>

Added minimal Plate object and a few tests for Instrument and Plate objects.

565f71b83f73a6fc4fb636cf49d530962f957396 authored over 14 years ago by Melissa Linkert <[email protected]>

Added object creation for the Instrument hierarchy.

68db7dfdee011e7d04f5b21aa0daf24595dade61 authored over 14 years ago by Chris Allan <[email protected]>

Make object creation a little more flexible in the test case.

2761ff6fe9c0b21bf556e8f14359e6d9a3b4540a authored over 14 years ago by Chris Allan <[email protected]>

Made whitespace and style conform to LOCI guidelines.

c5ef67fd1f4e1888b3277e2cb83259f59d835f1f authored over 14 years ago by Chris Allan <[email protected]>

Adding latest changes to create RC1

b6e99f515efd68e82f70df9ed5f5cb6eba39e4c0 authored over 14 years ago by Andrew J Patterson <[email protected]>

Full in/out support and test cases for 2010-04 working copy schema (OME-XML Subversion revision 506)

b2802a124efeaf41337e7cf511937bbe7321fdf6 authored over 14 years ago by Chris Allan <[email protected]>

Full in/out support for 2010-04 working copy schema.

8f3a0f6a035aaf062324e7f0e5ab7b80ab61000f authored over 14 years ago by Chris Allan <[email protected]>

Updating the transform for PlateAcquisition

d48c35eabea9f47fbf04b89a601d461ee0587d45 authored over 14 years ago by Andrew J Patterson <[email protected]>

New test file with two screens in for checking transforms - file is not complete yet but has enough to run tests

620b356f4649ffca47192b3b82ddd80fe3835335 authored over 14 years ago by Andrew J Patterson <[email protected]>

Committed actual class files for r6137 from 201004 code generation.

e52676a53733041830e2618e74f584879df5506c authored over 14 years ago by Chris Allan <[email protected]>

Add missed utility classes for various bits of code generation fun.

aa43fad1af525e0de666054c52ecff67119a7444 authored over 14 years ago by Chris Allan <[email protected]>

Support for r201004 schema and move to POJO based OME-XML instances.

cd54992eca034492df3825afc5c319c708e799f1 authored over 14 years ago by Chris Allan <[email protected]>

Re-arranged enumeration locations, split between ome-xml and bio-formats components. Initial commit of ome.xml.r201004 POJO based OME-XML instances (OME-XML Subversion revision 501)

6f19b4527f9efe4a66a4178bf3aed1c6cab1318a authored over 14 years ago by Chris Allan <[email protected]>

Extra logging in generateDS.

f22e9b128b5c364b092dbed1b174a9d712fae5a8 authored over 14 years ago by Chris Allan <[email protected]>

Transform now updated the ChannelRef for an ROI to a TheC attribute. Also added docs to the schema files to say that TheC, TheZ, TheT are numbered from 0.

3fca7eeba21dad7a0469e69b6d891fa18b8275d3 authored over 14 years ago by Andrew J Patterson <[email protected]>

Rename CommonAnnotation to Annotation to make AnnotationRef match the naming of the other Refs

176479fdee58e4e4d8823a7a00b5c0b55021a033 authored over 14 years ago by Andrew J Patterson <[email protected]>

Adding missing <xsd:appinfo>abstract</xsd:appinfo> to CommonAnnotation

87978da1ac1619a12652653a014d01bfeb36b6ce authored over 14 years ago by Andrew J Patterson <[email protected]>

Update to transform for ROI:Text & Label changes.

e3af29287d1bd7df48b08dcf7fc413f9c869b424 authored over 14 years ago by Andrew J Patterson <[email protected]>

Following discussion on devteam undoing some changes. ROI:Text is no longer renamed to Label. The Text attribute is no longer removed and has instead been renamed Label.

4cf0ce09b6763ce3818e4da29bcdc7e18ed59bdd authored over 14 years ago by Andrew J Patterson <[email protected]>

Removed unused code from transform and added comments outlining the remaining changes needed.

c99aa815706da0373ca4bbbf96e3bfc021269ced authored over 14 years ago by Andrew J Patterson <[email protected]>

Fixing incorrect shape ID

b1403a36193b286c638dcd92a9b8bc8ec8f04640 authored over 14 years ago by Andrew J Patterson <[email protected]>

Adding Enum for FillRule and some missing docs.

1a51ca7463362c2f27ea342c265748d86184bc9c authored over 14 years ago by Andrew J Patterson <[email protected]>

Fixing key for Shape ID

78f3ede5f9245e8509af299017e44f53755feaf2 authored over 14 years ago by Andrew J Patterson <[email protected]>

Transform now remaps the AcquisitionMode enums LaserScanningMicroscopy and LaserScanningConfocal to LaserScanningConfocalMicroscopy

ae3e8df8072d0eb8ddea60ae3d90cd3297a3f31a authored over 14 years ago by Andrew J Patterson <[email protected]>

Transform now works with Chris's FilterRef as a complex type version

fa3235ec3787358e3b563d11646a30a85487f631 authored over 14 years ago by Andrew J Patterson <[email protected]>

New version of Chris's changes with FilterRef as a complex type.

70f8ce6d983cad7aae1b54d941e87d1b089c08df authored over 14 years ago by Andrew J Patterson <[email protected]>

Adding new Enumerations from Jasons email and Wills detector.xsd, also comment out broken FilterRefs

4a3271e6400b437f00584b643833435cc5cd3a9f authored over 14 years ago by Andrew J Patterson <[email protected]>

Now using Chris's version of the schema using named Ref's in lightpath.

e4ec676009bcc4d7c9fb368f24f49a9850ba073e authored over 14 years ago by Andrew J Patterson <[email protected]>

Second ROI diagram, not finished

0169e65e8771e7e107b748e99afd9c1ebc41a74a authored over 14 years ago by Andrew J Patterson <[email protected]>

Handle ome.xsd from r474.

62dc2ed985135fc59c232f7479e40fb3c1df79f8 authored over 14 years ago by Chris Allan <[email protected]>

Fourth phase of changes to add optical element, now has working keys.

86ae79bb8ed594cae303e3adcb19b5c3815f9ba6 authored over 14 years ago by Andrew J Patterson <[email protected]>

Third phase of changes to add optical element to filterset, now ID is on OpticalElement not Filter and Dichroic.

205a488fb34f1fcb939ae892e50f10415b87a433 authored over 14 years ago by Andrew J Patterson <[email protected]>

Now with correct case filenames

0cd6948332085dc7ae793a8c60b64f7cb4220d10 authored over 14 years ago by Andrew J Patterson <[email protected]>

Removing files with the wrong case in filename

d42de13311abce9a5f3ff5a5b3665803857c4404 authored over 14 years ago by Andrew J Patterson <[email protected]>

Adding initial version of the schema to the Release folder. This version will be updated (some enums) before the final release but had most of the changes made.

5e99fa3f2f2b21ca0b44701aced302deebe8bd2a authored over 14 years ago by Andrew J Patterson <[email protected]>

Second phase of changes to add optical element to filterset, now have working Keys.

965ef4300deeb7dd5ff55cfef2ae4e2abe0a30e2 authored over 14 years ago by Andrew J Patterson <[email protected]>