github.com/ome/ome-model commits | Ecosyste.ms: OpenCollective

CPP Templates - Shape and LightSource

Updating the c++ templates to remove abstractProprietary and update
metadata functions for Shape...

c36b6008eeea30f24e038a06dab9fc6c01a43c71 authored about 9 years ago

Unit Test Updates

Updating existing unit tests and mock objects to deal with new Shape and
LightSource functions

54af8b58d1cf995a7d9034e5050529fd97b17272 authored about 9 years ago

Shape override config

Adding new config setting SHAPE_OVERRIDE and removing
ABSTRACT_PROPRIETARY_OVERRIDE

73874ba3946b541075edf193f236f5ac234766b2 authored about 9 years ago

Java templates - Shape and LightSource

Updating the Java templates to remove AbstractProprietary and update
Shape and LightSource metad...

d4defa99a6c309b35bd692e3d0cab2e5f0579046 authored about 9 years ago

CodeGen - Shape and LightSource

Updating code gen to use only Abstract types, removing the previous
AbstractProprietary

07c1f415854dca366eb125ce620c37c321ca96e0 authored about 9 years ago

Schema updates - Shape and LightSource

Making Shape and LightSource complex types
Changing from abstractProprietary to abstract

3b8d9f3cfc3caee1a47f0f97009c919dd9d4fd00 authored about 9 years ago

specification: Make Shape a complexType

71ac6f81a0e85caa1e76995a5747c1b91904286f authored about 9 years ago

cmake: GTest imported targets link with threading libraries

31fe3909ec043159227dd46a1c9ed419ac59257a authored about 9 years ago

Fix map namespace post schema unification

1eb253dc38aecaee20e78f75cb7723b64d67d466 authored about 9 years ago

cmake: Use imported targets with GTest

This allows the build to pick up the headers from the superbuild
correctly.

51dfb538f4dafaec54dcf9ffaa922f93fea5e0e2 authored about 9 years ago

Merge pull request #2115 from openmicroscopy/regions

Regions

8bbe7fb08cbcdeaf2eb0a0530f41d54530d12de3 authored about 9 years ago

Remove duplicated Hex40 simpleType definition

65259144277098897c750b2df9af1ac247da448a authored about 9 years ago

Merge pull request #2078 from rleigh-dundee/cpp-tiff-profile

cpp: PixelBuffer: Disable debug bounds checking

bff27e68aaff31b5fe1d186f396f74d53322b650 authored about 9 years ago

cpp: Handle relocatable install paths in bf-test

19a67ce50a9b25a848369e50935f7a39db68417b authored about 9 years ago

cmake: Use relative rather than absolute install paths

840745b0e2d5c0a3fc621ff86d6de001d5d72735 authored about 9 years ago

cpp: Remove embedded gtest

55a6ecb347b6432a262b8456e6a67ce42d719568 authored about 9 years ago

cmake: Drop superbuild options list

b56f3c1cdba13045b08c9b0a202c2f28ddb92736 authored about 9 years ago

cpp: Add relocatable-install cmake option

4fac60faeb148612048b50cc0f2b3c45c302ebc8 authored about 9 years ago

cmake: Update FindTIFF to use imported targets

b57f1b77d93b1c6563dfb64c00acd3b09ad1469a authored about 9 years ago

cmake: Update minimum version due to find_package feature requirements

c822c630da90bcf3d76fff3e482994a7406a4cf5 authored about 9 years ago

cmake: Use imported names and export configuration

56f486e6e0a56b4324143fc2fe45f6c70b73a26a authored about 9 years ago

cmake: Use external ome-compat and ome-common

b477e8da60dda3c0b1dd969ef1688164df1b4bdf authored about 9 years ago

cmake: Add and use Boost imported targets

fa431d9f42e72c546e871da219eeff56783ee0cb authored about 9 years ago

Fix current year in POM file

9542ee27130f159c7cf059f37aceb759e4638e91 authored about 9 years ago

cpp: test: Update pixelbuffer test logic

Also check for BOOST_DISABLE_ASSERTS as well as NDEBUG, when
deciding to run the death tests.

46d28540bc86cba0c72f2997118b4ee17694ee46 authored about 9 years ago

cpp: PixelBuffer: Disable debug bounds checking

This is extremely expensive for some compilers, such as
clang++, so disable unconditionally. It...

fad34addbd6714073f1fba0884897b43c7d94ac7 authored about 9 years ago

specification: Strip default namespace prefix for 2016 upgrade

d99429a23e21ea7924594b811177fc80e1d60dae authored over 9 years ago

specification: Unify namespace prefixes

477caafdf63be2d2674506edbe8870758a13a214 authored over 9 years ago

specification: Consolidate schema into single file

70758343a86133c485d9c311f684a9a1f3064a0b authored over 9 years ago

Only test openjdk7

Since Oracle JDK 7 should be tested via the OME CI infrastructure, testing it
on the Travis matr...

2f8f5daea1447e6c74e663b992bc18bd3509d960 authored over 9 years ago

Update Java 6 references to Java 7 equivalents

615338112fe86c1a909a2968e77b4930ea6ba252 authored over 9 years ago

Merge remote-tracking branch 'origin/develop' into java7

d4a0e02ceed1edc3767c2432cfc64f69a45b7833 authored over 9 years ago

Update POM version numbers to 5.2.0-SNAPSHOT

Repository: openmicroscopy/bioformats
Already up-to-date.

Generated by BIOFORMATS-DEV-latest-ve...

c524c529ebd7dd5e17d8fb48ab8164b962a26986 authored over 9 years ago

Merge pull request #2023 from jburel/xml-reader

XML reading

9cd4791f8b52557cc4d33c2efe8ea7539de5cb05 authored over 9 years ago

Merge pull request #2024 from mtbc/transforms-script

add Python utility script for generating ome-transforms.xml

db946501aa757a80ea4aeae9ef29abd0f385d4fc authored over 9 years ago

Add ome-transforms.xml header to generator

147f62590ab8c48fdcb9b95d9f1c51299635cdac authored over 9 years ago

Move logic to convertLightSource method.

22cc6c8eee3112a4efd4abda65fe0b9e31f8784c authored over 9 years ago

Fix indent

4a0b0efabd7ce992dd64993fc98518622d726fab authored over 9 years ago

add Python utility script for generating ome-transforms.xml

617b04058021540b126522c30d1c6b15b17ea84d authored over 9 years ago

Do not insert light settings if the light source is not available.

1682f83467335edb74da1a12cce21967fdf1cf36 authored over 9 years ago

Update POM version numbers to 5.1.6-SNAPSHOT

Repository: openmicroscopy/bioformats
Already up-to-date.

Generated by BIOFORMATS-5.1-latest-ve...

1c05718b98125423dd4bf14f34d0631d58ba65cb authored over 9 years ago

Merge pull request #2015 from snoopycrimecop/develop/latest/version_bump

Update POM version numbers to 5.1.5

b07040a0c2c99063de48b164467050365a8b403a authored over 9 years ago

Merge pull request #1999 from mtbc/ROIs-v2

ROIs v2

e3cf8550f04a63e57eb83b6195ee126e08219601 authored over 9 years ago

Use skipIfEmpty parameter to skip creating dummy JARs

bf3839e9dabec1d1318d2fe22bd43de25501bf0a authored over 9 years ago

Update POM version numbers to 5.1.5

Repository: openmicroscopy/bioformats
Already up-to-date.

Generated by BIOFORMATS-5.1-latest-ve...

88cdc4c55803d359d13a0ca31b40cc4b51413c49 authored over 9 years ago

Remove activation profile for building test JARs

This commit should remove the requirement for a conditional activation profile
when building tes...

a87831d663fb4ead05a81fb98b76eda4b7977ca0 authored over 9 years ago

Merge pull request #1984 from ximenesuk/fake-no-screen

Allow fake plates to have multiple screens, including none.

0fe03456644b7b49de77e84229fbd351eca26e3b authored over 9 years ago

Fix activation of test-jar profile

The conditional for deciding when to build the tests JAR was wrong,
because it was keyed to src/...

32148ea31587bcb03dc146afefadb70d884e49a3 authored over 9 years ago

Make IDs unique across screens, expand descriptions

86d6fc97063de66c38ba3331310293fa758231e7 authored over 9 years ago

Merge pull request #2005 from rleigh-dundee/cpp-reduce-warnings

cpp: Remove additional warnings

29660e8f0dc529e8d4fd0a9a5b0270b4fec90f69 authored over 9 years ago

Create multiple screens containing plates

5bf1c2a875234740a264b4655811399978b4483b authored over 9 years ago

cpp: Drop template debug comment

47e110c58f1bf01bdbfd3ae5f6b975bed18da554 authored over 9 years ago

cpp: Remove additional warnings

Ignore these warnings:
-Wvariadic-macros
-Wunused-local-typedef
-Wlanguage-extension-token...

686b3bfc6139fec92238e37510e244c354465e3a authored over 9 years ago

Bump Bio-Formats version to 5.2.0-SNAPSHOT

07de882e80a784007222fdfe0382ba6929a6f5ed authored over 9 years ago

Merge pull request #1971 from nylocx/cmake_config_install

Change the install path of cmake specific config files

cf6fd8af640359ea96def32ea87eb99d163d12a6 authored over 9 years ago

remove Roi.Namespace from 2016-DEV0 schema

c801c29a157b0a592c3bf6571b9de704c72bdee5 authored over 9 years ago

fix bug in schema downgrade

678ca352985f77ae0603d11c2238be8cad5afdac authored over 9 years ago

XML code should be using the newest schema

5c903711a6a4eab2b3b84b247b7ab320e26d446e authored over 9 years ago

update metadata converter to omit ROI namespace

8137606d37bdb9e73dd3c799e7c593efe5bb1fea authored over 9 years ago

add transforms between 2015-01 and 2016-DEV0 schemas

f074540ae81f11b30e5aa21ac9333caf8cb9b8b2 authored over 9 years ago

add new 2016-DEV0 schema with Shape.Visible omitted

ab0c707bae8d8afe252b70284730dc64f6ddc24c authored over 9 years ago

include 2016-DEV0 among transform paths

also rewrites later schema entries in file to match earlier

b15eb5d05b0242a131d0f69db6d3fe802aead589 authored over 9 years ago

bump build system up to 2016-DEV0 schema

5118c3e5875dd2e2a99fc2fd6e734b8fc6424e96 authored over 9 years ago

add new 2016-DEV0 schema to catalog

4958838d27a6ea52e8facd3eb047d99343a9161e authored over 9 years ago

remove shape visibility from metadata converter

b09b13a1814d9e649fe9dfec7bf9a6768a62f800 authored over 9 years ago

Merge pull request #1987 from rleigh-dundee/xsdfu-omero-remove

xsd-fu: Remove OMERO templates and targets

c09741327b90974a31a77a562fd3c9da36d29bbe authored over 9 years ago

Merge pull request #1978 from nylocx/planeregion_cmake

Add PlaneRegion.h to CMakeLists.txt

0ffe852694e3e6145b28d993603e2f04be48f622 authored over 9 years ago

Merge pull request #1986 from rleigh-dundee/cpp-tileinfo-tilecounts

cpp: TileInfo: Correct tile row and column count computation

98fe0cb86a723b9e5d74db143f2f3eea38e6877f authored over 9 years ago

xsd-fu: Remove OMERO templates and targets

bf1e0d9404777b44b5d609bb2e6e0eb8ea539bcf authored over 9 years ago

cpp: TileInfo: Correct tile row and column count computation

366cbb58e60fae2459c05a0eb54fe31ccf177c2e authored over 9 years ago

Add flag to allow for no screen when fake plate is created

958894ae772d2c210fbe28916dea8df77e5e112b authored over 9 years ago

Add PlaneRegion.h to CMakeLists.txt

The PlaneRegion.h header file was missing in the CMakeList.txt which
caused the file not to be i...

9ed88dd14c9648f11b2fabb3e585732366545b31 authored over 9 years ago

cpp: ome-xml: Correct Boost.Format use for Boost 1.59

The .str() method of boost::format is now required; the format
object does not provide a stream ...

b1ca64dc3c203c9a05f2074d9183511a8443bd39 authored over 9 years ago

Change the install path of cmake config files

Install the config files to directories that enable the build in
find_package function of cmake ...

f39e671b87259fe316f82fce14f467b1e9d60bc5 authored over 9 years ago

Merge pull request #1957 from joshmoore/eclipse-fix

fix xsd-fu/eclipse usage

c12850202722e1e9899ccaa917395b5a9b5177a1 authored over 9 years ago

Update POM version numbers to 5.1.5-SNAPSHOT

Repository: openmicroscopy/bioformats
Already up-to-date.

Generated by BIOFORMATS-5.1-latest-ve...

449acff9bb36bb80d3d696aabaccc2bc22d16fba authored over 9 years ago

Re-add boost for cppwrap

1acde96bc526e254ad23cb5c2906a7dd074f59cc authored over 9 years ago

Only run maven_findbugs on JDK7+

e9049d550851ffe1fbcb1ad2fefec9014818c0c4 authored over 9 years ago

Switch back to excluding oraclejdk8 for cppwrap

dca75070ed289ae61a354308f923d047f7db12d8 authored over 9 years ago

Fix sphinx target

19224ee4edf623525195e1eedb0fca8ddb4cb06b authored over 9 years ago

Simplify travis builds

As proposed, this drops the C++ builds and the
Latex/Sphinx builds in order to move us to the
co...

9d727e6b73ac25e0d3d145dcfeb1aa0f1ce8e5a6 authored over 9 years ago

Activate findbugs is travis

gh-1965 was merged into the daily build and had priority HIGH
findbugs warnings. If findbugs had...

87cb3a5c8b4cfc2b4242368f15d3b544e0f18af4 authored over 9 years ago

Update POM version numbers to 5.1.4

Repository: openmicroscopy/bioformats
Already up-to-date.

Generated by BIOFORMATS-5.1-latest-ve...

696e04945c83b7af8d5d874ac571e700beb8a5b6 authored over 9 years ago

fix xsd-fu/eclipse usage

This should remove some of the project failures when
importing the project via m2eclipse.

aa6eb308d65cee431a453d7cc6f2097ccc591c85 authored over 9 years ago

Merge pull request #1943 from rleigh-dundee/cpp-entity-resolver-registration

cpp: common: Rework XML EntityResolver catalogue registration

f15037d73729cda855ce262277a036800670da37 authored over 9 years ago

Merge pull request #1938 from rleigh-dundee/cpp-sb-remove

cmake: Remove super-build logic

48247dbdf9abd8ec0c4596feb6dfcadc5563a71b authored over 9 years ago

cpp: ome-xml: Correct copyright date for new files

932f38bf56c1001f9fe0e7d85f76c114dd7845d6 authored over 9 years ago

cpp: Minor documentation corrections

ba43c95f374f3a3d5869dea429a79708e84ddef7 authored over 9 years ago

cpp: common: Set default log level in logging core

47f427ca1aac8e28de0834947313a4f1c3850ceb authored over 9 years ago

cpp: common: Rework XML EntityResolver catalogue registration (2)

- Remove all use of static global state.
- All registered entities are contained directly within...

22681ab55bb69266e85eb64ef50c86bf77586572 authored over 9 years ago

Merge remote-tracking branch 'origin/develop' into cpp-entity-resolver-registration

c21bc5c575834f17d87ab5709cf9ee022fc33e54 authored over 9 years ago

cpp: common: Rework XML EntityResolver catalogue registration

The aim is to make the registration mechanism more flexible so it can
be used to manually regist...

ddfee531b6510e0bd0e8cbbd42b7179f43e8e8de authored over 9 years ago

specification: Correct incorrect catalogue entry

5a4d21f41a40785f90110cea0b5ab47b1a3f1cd3 authored over 9 years ago

cmake: Remove super-build logic

5d0c1d09565be482d4b9e7b19f400139323b3aec authored over 9 years ago

Merge pull request #1926 from rleigh-dundee/cpp-win4

C++: Final fixes to build on Windows

adaa67a97359147c8afcb73778f9ca1325bcd809 authored over 9 years ago

Merge pull request #1933 from rleigh-dundee/sb-verbose

cmake: Allow verbose sub-builds with Ninja generator

b25ea729dd298784e40ba06a00959c29f4fd3a70 authored over 9 years ago

Merge pull request #1931 from rleigh-dundee/cpp-sb-tiff-symbolver

cmake: Correct tiff superbuild symbol versioning properties

438e238af40670772f5eb5a80b9ed0704b2f6ef5 authored over 9 years ago

Merge pull request #1925 from sbesson/trac_baseurl

Trac URLs cleanup

48ccdde29929575f65def7640bb6dcc363dd1b5f authored over 9 years ago

cmake: Correct tiff superbuild symbol versioning properties

The target properties for the libtiffxx library were being
erroneously applied to libtiff, which...

d6aa312a6c5572d5c8dfea2ae2e6f71a8c1a135a authored over 9 years ago

cpp: test: Add missing XercesC include directories

bc55417146d0b43e70919505085cf41dba719937 authored over 9 years ago