github.com/openemr/cqm-parsers commits | Ecosyste.ms: OpenCollective

limit the number of HQMF tests further to prevent test timeouts on travis in JRuby.

cbeab0561ba7ec2692bf4e96bb160f22d279a680 authored over 10 years ago by Andre Quina <[email protected]>

Updated HQMF R2 generator and parser to align with the updated HQMF R2.1 spec

f6d9e2f46e1f62c025b8fb865324485394368a4f authored over 10 years ago by Black <[email protected]>

fixed issues with squashing hqmf_r2.1 branch

b8839bffb252e1580183021e612bc2a3ac7bfdd1 authored over 10 years ago by Andre Quina <[email protected]>

Merge branch 'cat1-stylesheet-fix'

Rebasing and merging pull request #146

3b84460a43dacf60fb534d026f7ed7c9347b04ea authored over 10 years ago by Andy Gregorowicz <[email protected]>

removed stylesheet reference in QRDA Cat I rendering template

4cf86e5cb8c86f61240d8b6c5e22e2c1a319a34c authored over 10 years ago by Andrew Hubley <[email protected]>

Updating the README

804707a493c12c88dcfaf3c32a36727e21555749 authored over 10 years ago by Andy Gregorowicz <[email protected]>

Updating mongoid to version 4.0.0.beta2

7cd46e4f9f9251c3935699d8892632ed25fa4f6d authored over 10 years ago by Andy Gregorowicz <[email protected]>

Merge remote-tracking branch 'rbclark/experimental_mongoid4'

Merging pull request #145

d927822b1688f223bb0dd0539c6268da822bc18a authored over 10 years ago by Andy Gregorowicz <[email protected]>

Database tasks have been moved outside of the rake module.

https://github.com/mongoid/mongoid/commit/4e0d211f73f63b7932f53ab5140a8609256b10f5

9840bc66c2cd489807bd224a2ad2f9c1fa9fad92 authored over 10 years ago by Robert Clark <[email protected]>

Mongoid 4 does not seem to handle id overrides the same as Mongoid 3 does. setting field :id, as: :id seems to have allowed us to work around this issue as long as we use self['id'] when referencing our internal ID and any other when trying to get the mongo _id.

4421111b317ec6f4fd7bb5b86bd90109f6a8ab85 authored over 10 years ago by Robert Clark <[email protected]>

In the mongoid 3 gem, running insert on a blank array returned a nil. On the mongoid 4 gem, running insert on a blank array causes a error 13066: "Message contains no documents". If we only run insert when bulk is not empty this fixes the issue.

288c98216f362fc29df16c6320d2348909edc329 authored over 10 years ago by Robert Clark <[email protected]>

include Mongoid::Attributes::Dynamic on additional models which need it.

88638d009b972b54dc055f8086039b17d3be68f7 authored over 10 years ago by Robert Clark <[email protected]>

Update location of BSON.

95f611e193789d347971f56cfc7ccbe190b30ee7 authored over 10 years ago by Robert Clark <[email protected]>

More progress towards Mongoid 4 compatibility

710bb844ccf80fe335479e4c8a2c1a69fa60dfe1 authored over 10 years ago by Andy Gregorowicz <[email protected]>

Experimental WIP to move HDS to Mongoid 4

This includes moving to ActiveModel 4 and get us ready to move
dependent applications to Rails 4...

232d7de141135508f5b7391de18633f85dee1a98 authored over 10 years ago by Andy Gregorowicz <[email protected]>

Alias fields the mongoid way instead of using the alias command.

4af847e93ee0c60738cf5395ce9d68a0743b6906 authored over 10 years ago by Robert Clark <[email protected]>

We have some fields that we assign but do not declare. By including Mongoid::Attributes::Dynamic, we tell mongoid to allow us to use fields that are not declared on the model.

8caa05f4d73afa8fd2f23cc294bfd1b7eff98ebc authored over 10 years ago by Robert Clark <[email protected]>

Merge pull request #144 from projectcypress/cat-1-header

added header support for cat1 export

3cf2331b303e7a2d6afc5e6e2126eaf93d289181 authored over 10 years ago by Andy Gregorowicz <[email protected]>

updated lockfile

485ed73cbf019301b29468ecc3bab8226db437af authored over 10 years ago by Andrew Hubley <[email protected]>

added header support for cat1 export

93175d6340638c67bf526c1e89480c7039a638db authored over 10 years ago by Andrew Hubley <[email protected]>

Merge pull request #143 from projectcypress/concurrent_with_measurement_period

Correctly handle "Concurrent" with Measurement Period Start or End

3dccdd2d93da67bfecd0fd93caaca57635f4d02c authored over 10 years ago by Andy Gregorowicz <[email protected]>

Correctly handle "Concurrent" with Measurement Period Start or End

When the HQMF parser sees references to Measurement Period Start and
Measurement Period End thes...

ecfa2bc231a2acc2dac11d4fd752ba3a1059295d authored over 10 years ago by krautscheid Krautscheid <[email protected]>

Bumping for v3.4.6

9621eb8a7ce4df7576ec2ccd9763812a0276305b authored over 10 years ago by Andy Gregorowicz <[email protected]>

Merge branch 'cat3_cv_fix'

Rebasing and merging pull request #142

1a2d4170b48500a3363eaa7a9a58f7f08f2c2107 authored over 10 years ago by Andy Gregorowicz <[email protected]>

updated cv template to except id and value

35ee193b2bf05faa5bf489400764ac636745da62 authored over 10 years ago by Rob Dingwell <[email protected]>

fixing cv reporting bug in cat 3 export

0cc8fc70aaf733014315190f9109fb14a6dc3998 authored over 10 years ago by Rob Dingwell <[email protected]>

Merge pull request #141 from projectcypress/ordinality_fix

Now properly sets the ordinality when importing

d5f15ac782631fdbf2a056fbd183ed31ce55b9c1 authored over 10 years ago by rdingwell <[email protected]>

Merge pull request #140 from projectcypress/fix_prefilters

Fixing date calculations in the prefilters

eb4e2e373983a405e59056b126ac468a152abfa1 authored over 10 years ago by rdingwell <[email protected]>

Now properly sets the ordinality when importing

Switching the parent class to CDA::ProcedureImporter. This allows us
to use the extract_ordinali...

8f87300b61a60dfb33ffe1643d19c428adf3b7eb authored over 10 years ago by Andy Gregorowicz <[email protected]>

Fixing date calculations in the prefilters

Previously, when calculating the dates for prefilters, we were
calculating a year as just 365 da...

ed2912e36aeac89c987739a6e72aee6252353a5a authored over 10 years ago by Andy Gregorowicz <[email protected]>

Merge pull request #139 from projectcypress/json_patient_import

Json patient import

fea3dc93b2ae61b36020da82311c5c3a7d2bedf6 authored over 10 years ago by rdingwell <[email protected]>

Switching from passing in a File to a Dir

It appears that using JRuby File.new(a_directory) throws a Permission denied
exception. This cod...

70dd38ef6b32faaa0b3311caa26a785d57c7d72a authored over 10 years ago by Andy Gregorowicz <[email protected]>

Merge branch 'master' of github.com:projectcypress/health-data-standards into json_patient_import

028df18b57a392ae67396aa2d8fc32203861bab2 authored over 10 years ago by Rob Dingwell <[email protected]>

updating bulk record importer to accept json documents and address issues with loading from directories as well as error handling and testing

ad6ff023431789b9e1ff0909445f867276944373 authored over 10 years ago by Rob Dingwell <[email protected]>

Updating the README

e269e2270907dcf9cd10d52c6fb91003ac24a68b authored over 10 years ago by Andy Gregorowicz <[email protected]>

Merge pull request #138 from projectcypress/fixing_prefilter_storage

embedded_in fixes where Mongoid stores Prefilters

b43c95b38231be0655b49bc755b1ed90200ec182 authored over 10 years ago by rdingwell <[email protected]>

embedded_in fixes where Mongoid stores Prefilters

Without this statement, Mongoid was putting Prefilters directly in the measures
collection. This...

a9740a157817a3f5f6faa3818e56af3b15c516f1 authored over 10 years ago by Andy Gregorowicz <[email protected]>

Merge pull request #136 from projectcypress/measure_prefilter

Measure prefilter

19511a11be6362ff777841314d3196d73d5a7d1c authored over 10 years ago by rdingwell <[email protected]>

Merge pull request #137 from rbclark/duplicate_include

ThingWithCodes is already included by Entry.

04a906be007e28c3c6e75360b2240d34af5f47bc authored over 10 years ago by Andy Gregorowicz <[email protected]>

ThingWithCodes is already included by Entry. Including it again causes an error with mongoid4 because the field codes is being redeclared. Removing the duplicate include stops the error and does not seem to cause any additional issues.

4294b73ed3751aaa89ccfaa0acefde4e187dc4dd authored over 10 years ago by Robert Clark <[email protected]>

Now building the MongoDB query hash in the measure model

4ea168cb26cdcb89d2ea341916ff55d49be036cc authored over 10 years ago by Andy Gregorowicz <[email protected]>

Starting work on prefilters for the CQM calculation M/R jobs

This code attempts to look at the measure structure to come up with
a MongoDB query to prefilter...

4a237a64fed67efcc7697bc80edd84d1f5667e7c authored over 10 years ago by Andy Gregorowicz <[email protected]>

Flip comparitors (they were wrong), removing $and clause (not needed)

63111c4605a51f35fc0bb181fa3dbf4286693189 authored over 10 years ago by Andy Gregorowicz <[email protected]>

Updating README

56e2e20ac3625fff96372d1eae17c5b87eae336e authored over 10 years ago by Andy Gregorowicz <[email protected]>

Merge branch 'medical-record-number-cat1'

Rebasing and merging pull request #135

50fd287418b984b6059dec7a5bf001c259177d58 authored over 10 years ago by Andy Gregorowicz <[email protected]>

added export of medical record number and medical record assigner, added relevant test case

f6773cf881a5957eaad051330c2790d641a8226b authored over 10 years ago by Andrew Hubley <[email protected]>

Merge branch 'cat3_schema_test'

Rebasing and merging pull request #132

4a1db2eecda9e96313a69f5401050b920c74dcc3 authored over 10 years ago by Andy Gregorowicz <[email protected]>

Fix display of representedCustodianOrganization in QRDA Cat III

It appears that the tag_name variable in the _organization template
was not working properly. Fo...

bc959cb364af30fbb5b658808338671f4d567442 authored over 10 years ago by Andy Gregorowicz <[email protected]>

drop extraneous <id/> element from <assignedCustodian/>

2ad1297dadec130d702a009b1fac81df89b42912 authored over 10 years ago by David Ross <[email protected]>

add a schema validation test for cat-3 exports

95c6e4cb8310eaa9992021a1b910f5035eba8558 authored over 10 years ago by David Ross <[email protected]>

Merge pull request #134 from projectcypress/fix_missed_preferred_code_cat1

fix missed preferred code on cat1 export

1992aa22c47b8e9a8a5e53150de70dfd9322a1e9 authored over 10 years ago by rdingwell <[email protected]>

fix missed preferred code on cat1 export

fc842a205f3aaa2c04f9ca31fbe1136dcaac5059 authored over 10 years ago by Andre Quina <[email protected]>

Version bump in the lockfile

26de1c02c38e146e93eba1631a9fbf4e1366de53 authored almost 11 years ago by Andy Gregorowicz <[email protected]>

Bumping the version number

0a48b6b86ce4927b1ca810d7f935cfc994601b1e authored almost 11 years ago by Andy Gregorowicz <[email protected]>

Merge pull request #130 from projectcypress/template_cache_fix

actually caching templates, doh

0a256d72b9beb7648cf34a9b293a99e3e0d85567 authored almost 11 years ago by Andy Gregorowicz <[email protected]>

actually caching templates, doh

827bcdcb989adce39a54994a725fab8a732af07c authored almost 11 years ago by Rob Dingwell <[email protected]>

Updating the README

397a14dfc2523e66c028a4f0a417173aaafdbfa9 authored almost 11 years ago by Andy Gregorowicz <[email protected]>

Merge branch 'cat1-patient-address'

Rebasing and merging pull request #127
Minor style changes as well.

3e019419b8acc13dfb129eb926409ba36d3379dc authored almost 11 years ago by Andy Gregorowicz <[email protected]>

added patient address to cat1 export

b3276277c6313574f25c446d0acc7570ed677389 authored almost 11 years ago by Andrew Hubley <[email protected]>

Small style changes in the template

Changing > 0 to present?
ERb changes to eliminate blank lines from being generated

fce0f97792ffd1ba122c19f2f9ded7c9dace0a27 authored almost 11 years ago by Andy Gregorowicz <[email protected]>

Merge pull request #129 from projectcypress/cat1_performance_xpath

scoping cat1 import xpath statements to the patient data section context...

4dac379071b245e4d2adcdc7cd635ccdb90675e7 authored almost 11 years ago by ahubley <[email protected]>

Merge pull request #128 from carpeliam/master

Resolve unknown providers to an orphan provider if not otherwise found

28852bb95bcf08b27cc1fc06de669b6df8a8677a authored almost 11 years ago by ahubley <[email protected]>

scoping cat1 import xpath statements to the patient data section context. This should imporve the performance of the importer as the old statements where essentially looking through every node in the document. Note this does not do anything for ccda cda or c32 importers

f947c24950ec6b78d687ddffd8dadcba45af63fa authored almost 11 years ago by Rob Dingwell <[email protected]>

Resolve unknown providers to an orphan provider if not otherwise found

7e6fcb83febb00c28c2ada567dafa7cf210ce424 authored almost 11 years ago by Liam Morley <[email protected]>

Merge pull request #126 from projectcypress/fix_cat1_typo

Fixing a copy/paste error in the Cat I header

ed64e025edfa884377c5203cb5dc3fdb3852dc4b authored almost 11 years ago by ahubley <[email protected]>

Fixing a copy/paste error in the Cat I header

It looks like the if condition was copied. Was checking race, should
check ethnicity.

c5901d895a5609f2161c4b740713f825381b801d authored almost 11 years ago by Andy Gregorowicz <[email protected]>

Merge branch 'cache_templates'

Rebasing and merging pull request #124

e5b88bcfaa7ab091806f21a78e994db92a9cbcf3 authored almost 11 years ago by Andy Gregorowicz <[email protected]>

adding caching of templates to export rendering. Moved ERB createing into template helper class

00fd16adad6c1552a94cb486d8ab6c7366829438 authored almost 11 years ago by Rob Dingwell <[email protected]>

Updating the README

1a95be127875247e3cb35f9d4ca2dc8480166969 authored almost 11 years ago by Andy Gregorowicz <[email protected]>

bumping version info for release

80551f5956230e0cfe89393dfaf33cfc333a4f79 authored almost 11 years ago by Rob Dingwell <[email protected]>

Merge pull request #123 from projectcypress/bundle-import-result-exclusion

added option to exclude calculation results and patients on bundle impor...

66331ee4fe396b7c076bb11ae969d7eb8676a97f authored almost 11 years ago by rdingwell <[email protected]>

added option to exclude calculation results and patients on bundle import rake task

b6daac714b21a617df5525fdcfc6691371afc29e authored almost 11 years ago by Andrew Hubley <[email protected]>

udpated README changelog to add pull request: #121

7a5673f90ab59b1350e22a71aefc1de5b569d98b authored almost 11 years ago by Andre Quina <[email protected]>

Merge pull request #121 from projectcypress/change_population_order

changed to order of ALL_POPULATION_CODES so that exceptions are after th...

1060480471a165a34d1d2ae4d62b98df8ac98967 authored almost 11 years ago by rdingwell <[email protected]>

Updating the readme

4d3300553097ddb3f3b73d727040bee42284d864 authored almost 11 years ago by Andy Gregorowicz <[email protected]>

changed to order of ALL_POPULATION_CODES so that exceptions are after the denominator

116f3c4064668d1fc9dcfbfd8f2c5a2afc48aad4 authored almost 11 years ago by Andre Quina <[email protected]>

Merge pull request #120 from yoon/cms_and_nqf_ids

Add cms id, nqf id, and continuous variable to Measure.categories

9522462dba7cb9037ba2ffa9be3ea0fa4359f215 authored almost 11 years ago by Andy Gregorowicz <[email protected]>

continuous variable

cf2c4e502cf74c4d648f09398a52a2de14cce7d7 authored almost 11 years ago by Mark Yoon <[email protected]>

add cms and nqf ids to Measure.categories

f15c7989cbcecec2f80cf437e0f74c2f1693a29e authored almost 11 years ago by Mark Yoon <[email protected]>

Merge pull request #117 from projectcypress/fix_query_cache_filter

Fixes handling of filters in the query cache

bf6c6df271aa0c4996ab67eea4cb80d390bbefc8 authored almost 11 years ago by ahubley <[email protected]>

Merge pull request #118 from projectcypress/remove_empty_hqmf_precondition

removes empty hqmf precondition... this can happen in HQMF using the dat...

33339e1846da831d9bab87b6e57b51a7d6f66738 authored almost 11 years ago by rdingwell <[email protected]>

Merge pull request #114 from jtferns/patient_export_description

Fix patient descriptions to 'definition, status'

287825f08abee9b5556d4346d5ddca73d2e0104b authored almost 11 years ago by Andre Quina <[email protected]>

removes empty hqmf precondition... this can happen in HQMF using the datediff operator

6e8e3788c7985829e7f23cf2efa00985b86be156 authored almost 11 years ago by Andre Quina <[email protected]>

Fixes handling of filters in the query cache

Previously, this code was adding a 'filter' attribute to the query.
The query_cache actually has...

50bdf0a3432fcfad3c7c3faea0306ce17f873b45 authored almost 11 years ago by Andy Gregorowicz <[email protected]>

Releasing 3.4.3

48cc6190db141fdc00a41376954fc8b4d00b0f81 authored almost 11 years ago by Andy Gregorowicz <[email protected]>

Updating Travis CI to test on Ruby 2.1.1 and removing develop testing

0f04f50808eb4680f956739c5c42d81ed44f7042 authored almost 11 years ago by Andy Gregorowicz <[email protected]>

Merge pull request #115 from projectcypress/cat3_provider_update

updated cat3 export provider support, added cat3 provider template

bbf14c340fb657cb20d505cb9ea7cbab096ad040 authored almost 11 years ago by Andy Gregorowicz <[email protected]>

updated cat3 export provider support, added cat3 provider template

bf1467d68560aa2fd114d1c8da5c0f07b5908112 authored almost 11 years ago by Andrew Hubley <[email protected]>

Fix patient descriptions to 'definition, status' if possible

cca8cb6a59ebb2512bf3c3230a0688aa6a8b8b1d authored almost 11 years ago by Janoo Fernandes <[email protected]>

Merge pull request #113 from jtferns/fix_missing_value

Set value for nil type when loading new MAT export measures. This is needed because the new MAT...

ed5704a38f2bbcbe4f60f5f855a846f33fd0b2b8 authored almost 11 years ago by Andre Quina <[email protected]>

Set value for nil type for new mat export measures

e52fea0debc063fbeff18d327c634c5da3f9fe55 authored almost 11 years ago by Janoo Fernandes <[email protected]>

Updating the README for the release of 3.4.2

6020ea6ab5ed570a17dd61ebbb659f3f3ccde636 authored almost 11 years ago by Andy Gregorowicz <[email protected]>

Removing a puts

6436c8bcc62067625b58741ab40bf54063b3a938 authored almost 11 years ago by Andy Gregorowicz <[email protected]>

Merge pull request #112 from projectcypress/typo_fixes

Fixing some typos that cause bad behavior

3ea821fb24a48f650d33500e9ce5cdf846c10187 authored almost 11 years ago by ahubley <[email protected]>

Fixing some typos that cause bad behavior

In the Cat I provider template, we were putting the root in the
extension attribute for the prov...

a6d57f1c0feb285bcb7ecf8fe76e0cbac78a35b6 authored almost 11 years ago by Andy Gregorowicz <[email protected]>

Merge pull request #111 from projectcypress/provider_cda_ident

added handling of cda_identifier in provider import, added unit test

d8d327c311be0b161e3c02d8f1610c8f4e66500d authored almost 11 years ago by Andy Gregorowicz <[email protected]>

added handling of cda_identifier in provider import, added unit test, provider ancestors are associated with patient record on import

56c9b9355596ed4d1403f424625170df9d8b1a3c authored almost 11 years ago by Andrew Hubley <[email protected]>

Merge pull request #110 from projectcypress/provider_npi_assignment

Fixing assignment of NPIs to a provider

98b6c10791affad1a5371853170ceda0def8798f authored almost 11 years ago by rdingwell <[email protected]>

Fixing assignment of NPIs to a provider

A provider should only have a singe NPI. This code makes sure that is
the case.

47b40d4d172945806d340584b62911ec7b2e1637 authored almost 11 years ago by Andy Gregorowicz <[email protected]>

Merge pull request #108 from projectcypress/export_providers_in_cat1

Now exporting providers in QRDA Cat I

606cc8750dbed50a2961292a748d4287d2f9964c authored almost 11 years ago by rdingwell <[email protected]>