github.com/openemr/cqm-parsers commits | Ecosyste.ms: OpenCollective

Fix issue when generating specific occurrence regex with updated ids

7b58c76b37627a6f1f23d0d738381295110f23f2 authored over 9 years ago by Janoo Fernandes <[email protected]>

Revert "Merge pull request #288 from projectcypress/fix_hqmf_specific_occ_issue"

This reverts commit 792cca9c50bee8a5f7936b70853c4136eba001f9, reversing
changes made to 0594c0c8...

ae956e726a2ae069c64b5b466ea18cc851c44ee4 authored over 9 years ago by Pete K <[email protected]>

Undo update for CMS30 and XSD to resolve DocumentV2Test issues

4ae5ba766df45c0a2f0f42c5a2da6a6c5e134a15 authored over 9 years ago by Janoo Fernandes <[email protected]>

Resolve issues with ParserTest

3f7c8c4e5456341e42455a5108d54108041b63e2 authored over 9 years ago by Janoo Fernandes <[email protected]>

Resolve issues with FulfillsTest

a8ca791f43ed5737416af38d38c247d0df363ef9 authored over 9 years ago by Janoo Fernandes <[email protected]>

Resolve issues with field values test

5937ad3d3d9b90845830bb38d30ef7e72a890fb9 authored over 9 years ago by Janoo Fernandes <[email protected]>

Resolve issues with HQMFV1V2GenerationTest

03a06235e3cf9f09268540ace4597d020ee760a1 authored over 9 years ago by Janoo Fernandes <[email protected]>

Update field values with QDM 4.1.2, HQMF r2.1, and QRDAI info

e93bdb5ba98018abb63dacacf6ac8291f3952f1d authored over 9 years ago by Janoo Fernandes <[email protected]>

Handle updated specific occurrence refs

3ae2baf787915944095cc192600f0dc2b81096e6 authored over 9 years ago by Janoo Fernandes <[email protected]>

Include pre-AU2015 CMD field value code for backwards compatibility

e294e27f09230ae56ad4b4d17e13fafbb6420e29 authored over 9 years ago by Janoo Fernandes <[email protected]>

Fix for missing code_list_id by selectively overwriting data criteria lookup

60f7bea35b99896ff40101d5fd4e81e798a53e6b authored over 9 years ago by Pete K <[email protected]>

Fix XPath for Procedure, Intolerance data category and 2 others

546c8e26069c3e7cad4a1d2b994abd5b9f3fa6f2 authored over 9 years ago by Pete K <[email protected]>

Patch variables that are single data criteria to embed groupers

3920292185c15a8020baa8490e2d1d62a19e5701 authored over 9 years ago by Janoo Fernandes <[email protected]>

Detect missing specific occurrences and clone source data criteria as needed

8ed40c802b0265e06a7ec384d5c23476b5e14fef authored over 9 years ago by Janoo Fernandes <[email protected]>

Patch specific occurrence references for accurate titles and descriptions

340231108ea9cf3ad513c745eb79f1510598de81 authored over 9 years ago by Janoo Fernandes <[email protected]>

Back out fix for EP141 to resolve EH109

886acec8ef8948554838015bade0a0f70f1fc0e0 authored over 9 years ago by Janoo Fernandes <[email protected]>

Ignore variables when detecting missing specific occurrences

7e3a14276a450be03ee35c81f27389837f58e961 authored over 9 years ago by Janoo Fernandes <[email protected]>

Strip tokens on all references to resolve missing verbose SDC ids

1c2ea9f62699c555a9217e59279fe856889c3968 authored over 9 years ago by Janoo Fernandes <[email protected]>

Grab correct reference for FLFS field value

01682f99b7bc83896cda29bf72226761e9635ca3 authored over 9 years ago by Janoo Fernandes <[email protected]>

Handle bad specific occurrence references with missing identifiers

a04d222791d63d8f05eb3f43278e04f159e0b4af authored over 9 years ago by Janoo Fernandes <[email protected]>

Include default UNION derivation_operator on patched verbose variable refs

c15a7b02bfefcdb9046305b55f80ea1217203341 authored over 9 years ago by Janoo Fernandes <[email protected]>

Update stratification handling

ea2e6b029c7e26b8a2d8da165e55ebfa605e84d1 authored over 9 years ago by Janoo Fernandes <[email protected]>

Fix issue with iterating array on temporal references

a62cca73f574d532c684868fb026395fc95ea8aa authored over 9 years ago by Janoo Fernandes <[email protected]>

Resolve parser errors with occurrence mapping and calculation issues with intersections

8b9a90559dabb7451f3e10c771bd6002d5caded5 authored over 9 years ago by Janoo Fernandes <[email protected]>

Detect and handle verbose references for groupers with subsets

092c3b63cec6ac8b922f0e8cfe4ad4649ff525fb authored over 9 years ago by Janoo Fernandes <[email protected]>

Fix issue with '>= 0' being parsed as non-inclusive

06754b032bf11d30296450dd8573cc4b70d765e1 authored over 9 years ago by Janoo Fernandes <[email protected]>

Extract children for specific occurrences of variables

06ea0bb444439e8676ea38e0a8e75eb1edbb4de9 authored over 9 years ago by Janoo Fernandes <[email protected]>

Resolve specific occurrence extraction issues and los/ss inclusivity issues

d35aa9bc277c2f30534d97210bb944f9eedfc0c5 authored over 9 years ago by Janoo Fernandes <[email protected]>

Sort populations to match actual population order

f586d2b0ed50448ec4a1b7ee9a162801eb9a641c authored over 9 years ago by Pete K <[email protected]>

Track specific occurrences by reference with a map

8dc9a67ad14e8efb19b2c6444359560366dcdd24 authored over 9 years ago by Janoo Fernandes <[email protected]>

Handle transfer to/from code_list_id usage correctly

c38eaf87a032ffae47daeacda7c2f08913d713eb authored over 9 years ago by Janoo Fernandes <[email protected]>

Break out inclusivity handling for various ranges

bd1638d8bb5e9e6539a59c984f7041b1a4bb92ec authored over 9 years ago by Janoo Fernandes <[email protected]>

Update specific occurrence handling for specific occurrences of variables

c1bf52dc23f140ff3868b6f434c1f3396d8768eb authored over 9 years ago by Janoo Fernandes <[email protected]>

fixing xpath statements that had incorrect typeCodes in Device * templates that cuased us not to be able to find the valueset information for devices

0e3b284e2b0d743ba5f4dd32a83f4db25dfd195d authored over 9 years ago by Rob Dingwell <[email protected]>

Resolve parsing issues with specific occurrence of single data criteria varivariables

c24e77f92ded40e8fc5e9eb3a249d35c6a3b3057 authored over 9 years ago by Janoo Fernandes <[email protected]>

temp fix for Cannot set property 'date' of null errors seen during comparision with simplexml parsed measures. This has to do with measure period parsing. Deafulting to using one year period and will deal with parsing the MP later

3907c0304c62fea767237360d28336df68e614de authored over 9 years ago by Rob Dingwell <[email protected]>

fixing issue with date range construction for different hqmf 2.1 field values

bdf411abf2782dc03bd219768223dc8610fc7245 authored over 9 years ago by Rob Dingwell <[email protected]>

Align value parsing to utilize IG table for determining inclusivity

85582057c1e5fe07a1d8c22892304cdf9337ea2b authored over 9 years ago by Janoo Fernandes <[email protected]>

Hotfix subset operator handling for SUM and values

0900a634fa3db24977cba6cd700182e01683be88 authored over 9 years ago by Janoo Fernandes <[email protected]>

fixing issue with fulfills parsing while generating measure calculation code

a3e2930b4fcf7e36a59e77ccea240893b876e1d5 authored over 9 years ago by Rob Dingwell <[email protected]>

Fixed issues with variables with single data criteria and variable names

e2c1309b29910f25e7fe63fe620b084a4b6a229e authored over 9 years ago by Pete K <[email protected]>

fixing issue where result information needs to be pulled from source criteria references for specific occurences

0765180c915514d75b4e58ac1f8fc3c56cdf39fa authored over 9 years ago by Rob Dingwell <[email protected]>

Simplify inclusivity parsing for values, no longer defaulting to inclusive

b762ac7997544740a92a9b838e5bbb2b405ff5ef authored over 9 years ago by Janoo Fernandes <[email protected]>

Patch code list ids for specific occurrences

66c8c18dd5e6d3d2ad2e09b35603df154cdb7d90 authored over 9 years ago by Janoo Fernandes <[email protected]>

Update temporal reference types with latest temporal reference types

1a7ee8ae454ead7ff6ccb62e4e4ff3bb3001f1fc authored over 9 years ago by Janoo Fernandes <[email protected]>

fixing issue related to facilty location not being assigned a coded value

d60ad74403ae9c7f56ed5eb4b3c73cf7afbbb9e5 authored over 9 years ago by Rob Dingwell <[email protected]>

updating measure observation parsing to fix bugs in xpaths statments and address errors in v1 v2 round trip testing.

f0a2ced69a19fddae52541b754443b417ddc823b authored over 9 years ago by Rob Dingwell <[email protected]>

stripping out all non alphanumeric characters from data criteria names

a3d082b40a7a4ab19550c55222567795606da2a6 authored over 9 years ago by Rob Dingwell <[email protected]>

Add hack to patch_descriptions for fixing source_data_criteria ids to resolve TIMEDIFF specific occurrence identifier issues

13c0e54cc33a945390bd86e47f20daf23db17759 authored over 9 years ago by Janoo Fernandes <[email protected]>

Only extract variable reference information when dealing with specific occurrences of variables

94382d26cc2974ce678d3ec06504a76f589f00ec authored over 9 years ago by Janoo Fernandes <[email protected]>

fixing issue that caused extraneous population groups to be created

3a09a741d20769a4b24dab0b14ab7635c3a208c1 authored over 9 years ago by Rob Dingwell <[email protected]>

added method to lookup a data criteria by the localvaribale name. This is needed for mapping the criteria in the measure observation section. fixing issues related to not parsing facility location times correctly

be53abb685da7562710a2cb83aea06e3e71d477d authored over 9 years ago by Rob Dingwell <[email protected]>

Add Strat population Ids back to fix parsed populations

5ec7197210cfd9337d5efbe810a851edd9d39464 authored over 9 years ago by Janoo Fernandes <[email protected]>

Fix population parsing issue with empty STRAT preconditions

f5d6aab21ce33ae852ef74b60ce570ae2710b218 authored over 9 years ago by Janoo Fernandes <[email protected]>

Resolve issue with patient characteristic descriptions with value set info

9105a4146aa4b044befd47d02a40f3f5c9aec743 authored over 9 years ago by Janoo Fernandes <[email protected]>

Reset status when extracting variable entries as grouper data criteria

cb7e8a2a193a72aebc8dc4a584468b7e0d411cf4 authored over 9 years ago by Janoo Fernandes <[email protected]>

Resolve issues with verbose field value temporal references; tidy up some code

617ad23e5140db5262444b0523d8a20b40739f6a authored over 9 years ago by Janoo Fernandes <[email protected]>

adding very specific parsing for measure observations. This parsing logic is based on the need to deal with the 3 EH measures that have observations and deals only with thsoe use cases. Otheres will need to be added as encountered

077104c32bb2d9ffe54525bc44f229538f7405ed authored over 9 years ago by Rob Dingwell <[email protected]>

Temp fix for lengthOfStayQuantity days unit

24df1abeaca91726f73c6f86a44ebb65e2e3a2fc authored over 9 years ago by Janoo Fernandes <[email protected]>

updating tests to deal with incorrectly formated test data and updated criteria parsing with an id generator

de22a50128054749109a78ac602cafe1165d4ee1 authored over 9 years ago by Rob Dingwell <[email protected]>

Handle values as inclusive unless otherwise specified via [low/high]Closed=false

38e50a0589a8c7e20895c2f5d41e427d3c0f2411 authored over 9 years ago by Janoo Fernandes <[email protected]>

Extract value from negation_code_list_id; patch descriptions for multiple data criteria names

472a66cd7745691070ac7437b592497a1f6c238a authored over 9 years ago by Janoo Fernandes <[email protected]>

Fix typos to resolve missing root precondition conjunction codes

f81d2f986e44abcece63c4082d127406bbf6a89a authored over 9 years ago by Janoo Fernandes <[email protected]>

fixing bug where negation code list id was being pulled from the wrong location

bdffe5a56444879ad6ac07fc2f42edbb7fef228c authored over 9 years ago by Rob Dingwell <[email protected]>

Fixed issue where preconditions where not being properly scoped in populationCritiera base on the populations default conjuntion code. When there are multiple preconditions or a single precondition that has a conjuntion code that does not match the population criteria default this update will wrap the population preconditions in a single precondition with the correct conjuntion code.

857e0249aa78683a1370d95c33d851d3ef1b62e0 authored over 9 years ago by Rob Dingwell <[email protected]>

Add support for wrapping variables with grouper data criteria

51edb24eb1e6b96465a6434482f2a03fc18de9c0 authored over 9 years ago by Janoo Fernandes <[email protected]>

adding id generator for preconditions.

fb854ee3cb5fcd4d6b03e3083f7583334f4f1f4b authored over 9 years ago by Rob Dingwell <[email protected]>

fixxing issues with updated criteria parsing

81aabdbb5d79d5a77d096de7488b3bc9db1d0121 authored over 9 years ago by Rob Dingwell <[email protected]>

adding map to describe the location to find the valueset and result information for qdm types base on thier template id

2641ab35d0d6b8f2241c3c162fdfa86403cdda43 authored over 9 years ago by Rob Dingwell <[email protected]>

Update criteria parsing to split up STRAT criteria individually; fix references with missing prefixes

4ee4f6f70d4db7883e0de52d8e7b7fe2f1075165 authored over 9 years ago by Janoo Fernandes <[email protected]>

Fixed field value keys (ORDINALITY -> ORDINAL, etc)

ba54a218b861171d5390c6f7a20838e1daa16d69 authored over 9 years ago by Pete K <[email protected]>

attempting to handle intersection parsing. Intersections and unions come across as grouperCritiera without a template id. Previously we were marking Interscetions as Xproducts, this now sets them to Intersection

661fe4e863c9d3f5a3ee836130585fcf975f21a4 authored over 9 years ago by Rob Dingwell <[email protected]>

Update descriptions for data criteria to utilize a trimmed title to fix human readable issues

5d508e2f5d72dab636e62b8f8d1b0e1286324959 authored over 9 years ago by Janoo Fernandes <[email protected]>

Skip Supplemental Data Elements parsing, handle root preconditions with any missing conjunctions

98aa4ee9219f8bb21ab109029581b4285adea8e7 authored over 9 years ago by Janoo Fernandes <[email protected]>

Ignore supplemental data criteria in STRAT and generate unstratified populations

07b209187a0f7273145e37636e23e85d7fef8f92 authored over 9 years ago by Janoo Fernandes <[email protected]>

fixing issue where looking for stop datetime actually looked in wrong location. Added anatomical_target to condition

50f91f28b172814d5b2ec7c2792e3058ca078a36 authored over 9 years ago by Rob Dingwell <[email protected]>

added field values to hds models. Updated templates to use update anatomical attributes. Updated importers to deal with anatomical attributes. Added feild value helper for updated hqmf models.

d2512d58567f9eb26e34d54416d9a5ec1ad271b5 authored over 9 years ago by Rob Dingwell <[email protected]>

adding support for date fields. SOme needed special case handeling due to the nature in which they are represented in HQMF r2 and QDM. Added in special case handling of negation rationale for REASON code fields. Negation Rationale is not treated as a field value in our underlying data model.

Added special case handeling of RESULT field values. Like Negation results are not treated as fi...

8100fff91a765e56babdff708a244c6b1d2387f2 authored over 9 years ago by Rob Dingwell <[email protected]>

Handle specific occurrences of variables, fix root preconditionsg

ac68dd945894755917b10f46e487a3f8b3018a63 authored over 9 years ago by Janoo Fernandes <[email protected]>

Fix source data criteria parsing and identical population criteria handling

8fd670de39ee0189fd708ab134433fce4976998d authored over 9 years ago by Janoo Fernandes <[email protected]>

Resolve template id mismatch and fix data criteria ids to resolve JS parsing issues

f62e61880cd67ea9b2a179c0b8564b82b30c88c9 authored over 9 years ago by Janoo Fernandes <[email protected]>

The MAT current exports preconditions that reference population criteria. We currently do not support that concept and the addition of those preconditions causes the parser to throw an error during parsing. To get around this issue for the time being the preconditions that reference populations will be stripped out of the document before further processing ocurrs

845c994447c08c42ddc211ebef2d7305be2a0362 authored over 9 years ago by Rob Dingwell <[email protected]>

Add laterality and other new fields

36b0127a395f48288eeb3bc0f3f00f264af74a67 authored over 9 years ago by Pete K <[email protected]>

Render generic patient characteristic criteria in qrda cat I documents

Added ability to set a wild card on preferred code set in rendering
template to allow any coded ...

5bb0bc6d1efe253da3048b80d2ccd1cd0caed0e0 authored over 9 years ago by Rob Dingwell <[email protected]>

Allow scoped value sets for html export

e60df24ed23f7ba555281bf49b3da8faf2a754de authored over 9 years ago by Pete K <[email protected]>

Add root preconditions with appropriate conjunction codes for all population criteria

93735fc30ec30860d932bbceb196b5ab5f4c549f authored over 9 years ago by Janoo Fernandes <[email protected]>

Incomplete parsing of MAT-generated HQMF 2.1 xml

d0c51b2b27b3127aa02d00c79c5932cb417606e5 authored over 9 years ago by Janoo Fernandes <[email protected]>

Fix data criteria references via map of created data criteria; resolve measure logic text issues

c74c84cb2591ee0f758db1de9d1f038b1ee27f2f authored over 9 years ago by Janoo Fernandes <[email protected]>

Fixed usage of value_or_null_flavor to reflect actual output

4da58f9e7540843390e6dd163e61d9bec3df2207 authored over 9 years ago by Pete K <[email protected]>

move negotiation indicator to top so consistent with other entries. fixes JIRA 61

eb12aae7af7e1f08c0cb95097bc168f03d635f06 authored over 9 years ago by thecristen <[email protected]>

Correct time representation in Transfer From and Transfer To template sections

2d33490f8a141932ad134a71919b916742910abe authored over 9 years ago by Pete K <[email protected]>

add template for device order, fixes JIRA 63

e663168f69ecbca0cca074e7441d9276c06e52b7 authored over 9 years ago by thecristen <[email protected]>

Implementing fulfills operator parsing in hqmf r2.

Added Reference class to the models to allow Entries to have arbitary
references to other entri...

37ee146c30ba063c7844cfde4c246731f3de6fac authored over 9 years ago by Rob Dingwell <[email protected]>

Fixed tests to reflect death date variable name fix

ba19d6c06f57f8ed774469243652272be7681781 authored over 9 years ago by Pete K <[email protected]>

fix transfers template to properly output transfers

342a0a8e7e75ed122e3d1305181b15a6b5b7ac67 authored over 9 years ago by Andre Quina <[email protected]>

Fix case statement syntax

5f882fe56a606cb3076fe1f460c63f0825e51a08 authored over 9 years ago by Pete K <[email protected]>

Fix variable name mismatch with patient death time in template

4b8ac8abfdcc0873bc4be80159330eebea57d40c authored over 9 years ago by Pete K <[email protected]>

Add SUM SubsetOperator to global types

41198dbaec7cae801fbab5f25c3a122f8451b6f6 authored over 9 years ago by Janoo Fernandes <[email protected]>

updated temporal references to align with QDM templates

ff0c57cbb6a19e58deafb3944fadf007d68e1b5c authored over 9 years ago by Andre Quina <[email protected]>

Handle IVL_TS field values on data criteria for static dates

bfc41d0aeff775079ef745405bf27d1ddd5d5603 authored over 9 years ago by Janoo Fernandes <[email protected]>