github.com/BioJulia/BioSequences.jl issues | Ecosyste.ms: OpenCollective

CompatHelper: bump compat for BioSymbols to 5, (keep existing compat)

github-actions[bot] opened this pull request almost 3 years ago

WIP: Test bonanza for v3

jakobnissen opened this pull request almost 3 years ago

Add `has_interface` function

jakobnissen opened this pull request almost 3 years ago

Clarify comparison to sequences in docs

jakobnissen opened this pull request almost 3 years ago

Rename stringbyte and avoid pirating BioSymbols

jakobnissen opened this pull request almost 3 years ago

Include comparison example

CiaranOMara opened this issue almost 3 years ago

Don't recommend users engage in type piracy with `stringbyte`

jakobnissen opened this issue almost 3 years ago

Fix REPL blocks in docs

jakobnissen opened this pull request almost 3 years ago

Remove sequence conversion to/from String and Vector

jakobnissen opened this pull request almost 3 years ago

errors in docs: random kmers

EvoArt opened this issue almost 3 years ago

Add parsing of BioSequence, simplify some printing

jakobnissen opened this pull request almost 3 years ago

Improve docstrings

jakobnissen opened this pull request almost 3 years ago

Add workflow for downstream tests

CiaranOMara opened this pull request almost 3 years ago

Improve docstrings and changelog slightly

jakobnissen opened this pull request almost 3 years ago

Search API redo

TransGirlCodes opened this pull request about 3 years ago

Add `findall` methods

CiaranOMara opened this pull request about 3 years ago

Remove dependency on StableRNGs

jakobnissen opened this pull request about 3 years ago

Stop shipping with StableRNGs?

jakobnissen opened this issue about 3 years ago

No version for Julia 1.6.1

ammonite opened this issue about 3 years ago

No version for Julia 1.6.1

ammonite opened this issue about 3 years ago

CompatHelper: bump compat for BioSymbols to 5, (keep existing compat)

github-actions[bot] opened this pull request about 3 years ago

Make macro literals dynamic

jakobnissen opened this pull request about 3 years ago

Default to dynamic allocation for string literals

jakobnissen opened this issue about 3 years ago

CompatHelper: bump compat for "BioSymbols" to "5"

github-actions[bot] opened this pull request about 3 years ago

Should we make BioSequences <: AbstractVector?

SabrinaJaye opened this issue about 3 years ago

Implement broadcasting for BioSequences

SabrinaJaye opened this pull request about 3 years ago

Implement reverse translation (AminoAcid -> Codon)

BeastyBlacksmith opened this issue over 3 years ago

Update interface to version 3.

jakobnissen opened this pull request over 3 years ago

Streamline find functions to behave like Base's

jakobnissen opened this issue over 3 years ago

Check interfaces, remove NotImplemented errors

jakobnissen opened this issue over 3 years ago

Fixup tests before v3

jakobnissen opened this issue over 3 years ago

Implement broadcasting for biosequences

jakobnissen opened this issue over 3 years ago

Fixup addition with a BitIndex

SabrinaJaye opened this pull request over 4 years ago

Use stable RNG (take two)

jakobnissen opened this pull request over 4 years ago

Syntax error fix

SabrinaJaye opened this pull request over 4 years ago

Improve performance of bit-parallel counting methods

SabrinaJaye opened this pull request over 4 years ago

Test on julia 1.2 in travis

SabrinaJaye opened this pull request about 5 years ago

SkipmerFactory

SabrinaJaye opened this pull request almost 6 years ago