github.com/YuLab-SMU/ggtree commits | Ecosyste.ms: OpenCollective

bump version after creating 3.3 branch

git-svn-id: file:///home/git/hedgehog.fhcrc.org/bioconductor/trunk/madman/Rpacks/ggtree@117081 ...

2c02aba817e746cb0160d7c8aaaa542bd77aa821 authored over 8 years ago

bump version after creating 3.3 branch

git-svn-id: https://hedgehog.fhcrc.org/bioconductor/trunk/madman/Rpacks/ggtree@117081 bc3139a8-...

fa234538169cf17fd8692eaeae3daf18a12ba0cd authored over 8 years ago

Bump versions prior to creation of 3.3 branch

git-svn-id: https://hedgehog.fhcrc.org/bioconductor/trunk/madman/Rpacks/ggtree@117079 bc3139a8-...

779dabbeabd012d1ece61c30310fd7a11f9d86b8 authored over 8 years ago

Bump versions prior to creation of 3.3 branch

git-svn-id: file:///home/git/hedgehog.fhcrc.org/bioconductor/trunk/madman/Rpacks/ggtree@117079 ...

038122fbcfa3afc887c6d49a5c6ae6b30aa439cc authored over 8 years ago

geom_treescale() supports family argument <2016-04-27, Wed>

0ad19340c24fc241fad64a1c742a33448f23122c authored almost 9 years ago

geom_treescale() supports family argument <2016-04-27, Wed>

git-svn-id: https://hedgehog.fhcrc.org/bioconductor/trunk/madman/Rpacks/ggtree@116825 bc3139a8-6...

51f3c87745e5663b4d46d37f9c4774498567c00e authored almost 9 years ago

geom_treescale() supports family argument <2016-04-27, Wed>

git-svn-id: file:///home/git/hedgehog.fhcrc.org/bioconductor/trunk/madman/Rpacks/ggtree@116825 b...

8a5c744d06d14f9866d7b4c0611a7187c1856a1e authored almost 9 years ago

update URL

git-svn-id: https://hedgehog.fhcrc.org/bioconductor/trunk/madman/Rpacks/ggtree@116786 bc3139a8-6...

2727abffc3b8ad0700ddd2e7d30a2bbcb7cb777d authored almost 9 years ago

update URL

git-svn-id: file:///home/git/hedgehog.fhcrc.org/bioconductor/trunk/madman/Rpacks/ggtree@116786 b...

79884752b03bf062f7d93414418e7349f40ec974 authored almost 9 years ago

update url

00e33cf73080894fd795e0d606a18a45457d41da authored almost 9 years ago

update url

9f9bfa19346aa294aa066224c6a5d3c7083bae86 authored almost 9 years ago

update URL

git-svn-id: https://hedgehog.fhcrc.org/bioconductor/trunk/madman/Rpacks/ggtree@116785 bc3139a8-6...

e98fe912fb6f84b4de964a4aa23bd0c8215b2c71 authored almost 9 years ago

update URL

git-svn-id: file:///home/git/hedgehog.fhcrc.org/bioconductor/trunk/madman/Rpacks/ggtree@116785 b...

438b277affe0c7ad33daa7c11ed84bcd7b2304c0 authored almost 9 years ago

update rotate

5c58e6ef059abd378979c38d776f17b1e92f1dbb authored almost 9 years ago

update rotate

git-svn-id: https://hedgehog.fhcrc.org/bioconductor/trunk/madman/Rpacks/ggtree@116686 bc3139a8-6...

8f2b22ee25c026ea856ee45726f39b48692799ba authored almost 9 years ago

update rotate

git-svn-id: file:///home/git/hedgehog.fhcrc.org/bioconductor/trunk/madman/Rpacks/ggtree@116686 b...

b21ec73a7a5badeb9be1bee5559b50ae8a7e4e89 authored almost 9 years ago

update readme

770bd0974845749dba94f90512692af2b0575718 authored almost 9 years ago

update README

git-svn-id: file:///home/git/hedgehog.fhcrc.org/bioconductor/trunk/madman/Rpacks/ggtree@116644 b...

1207e25e3fe81cf94bdfa1e0bcd1102c28b115df authored almost 9 years ago

update README

git-svn-id: https://hedgehog.fhcrc.org/bioconductor/trunk/madman/Rpacks/ggtree@116644 bc3139a8-6...

5d22156bc5450c90edaa528b19c1834414fbe41c authored almost 9 years ago

support textConnection

git-svn-id: file:///home/git/hedgehog.fhcrc.org/bioconductor/trunk/madman/Rpacks/ggtree@116643 b...

f2aa6adb9f2523c4e05c350054b50e91535f8803 authored almost 9 years ago

support textConnection

git-svn-id: https://hedgehog.fhcrc.org/bioconductor/trunk/madman/Rpacks/ggtree@116643 bc3139a8-6...

0ed2ffd96e1283311638f6b8d835fb905ca2af2d authored almost 9 years ago

filename function

450410eb1336f1df4a2b2f2b3a27776215401fdc authored almost 9 years ago

fortify.phylo works with missing value of edge length

86ee0991fa7e0954d51df9bc3dd5fff383571113 authored almost 9 years ago

fortify method works with missing value of edge length

git-svn-id: https://hedgehog.fhcrc.org/bioconductor/trunk/madman/Rpacks/ggtree@116634 bc3139a8-6...

fb5e6a572fae43797b63af969a4af59438db72f5 authored almost 9 years ago

fortify method works with missing value of edge length

git-svn-id: file:///home/git/hedgehog.fhcrc.org/bioconductor/trunk/madman/Rpacks/ggtree@116634 b...

9cfed15f90de5d2358af6e8a7e4098c791b33d80 authored almost 9 years ago

geom_tiplab2 supports hjust

431b3bb7c4a6cb28530b9cfbf86f47e2344e2946 authored almost 9 years ago

geom_tiplab2 supports hjust

git-svn-id: file:///home/git/hedgehog.fhcrc.org/bioconductor/trunk/madman/Rpacks/ggtree@116446 b...

bf3a8df9b80be6cdd0302f6eab26ba0dd60052ee authored almost 9 years ago

geom_tiplab2 supports hjust

git-svn-id: https://hedgehog.fhcrc.org/bioconductor/trunk/madman/Rpacks/ggtree@116446 bc3139a8-6...

2166288c872ccee57621b7db5a48b53f4e1cd2b9 authored almost 9 years ago

fixed typo

git-svn-id: https://hedgehog.fhcrc.org/bioconductor/trunk/madman/Rpacks/ggtree@116258 bc3139a8-6...

123030b259d86c9529979a8ecd08c80dcd6ddf51 authored almost 9 years ago

fixed typo

git-svn-id: file:///home/git/hedgehog.fhcrc.org/bioconductor/trunk/madman/Rpacks/ggtree@116258 b...

284b2f4d6aa08687839b70c5f698bc8a1d89d26c authored almost 9 years ago

typo

d18e77a1b6a7c4ec1db5b587e4f60f14fa55b570 authored almost 9 years ago

geom_label2

74ad94ba7e05c2a5d8fd69c40ce3701dad8b75c0 authored almost 9 years ago

geom_label2

git-svn-id: file:///home/git/hedgehog.fhcrc.org/bioconductor/trunk/madman/Rpacks/ggtree@115937 b...

7d9641c6021e33f48b28a9b3b4b9e1dd8804c6c8 authored almost 9 years ago

geom_label2

git-svn-id: https://hedgehog.fhcrc.org/bioconductor/trunk/madman/Rpacks/ggtree@115937 bc3139a8-6...

f35d40fdb7c38918b7b49769c6918a52f41dcb7e authored almost 9 years ago

geom_tiplab2

git-svn-id: file:///home/git/hedgehog.fhcrc.org/bioconductor/trunk/madman/Rpacks/ggtree@115882 b...

ee6dfb2c610093de36825e9484fa39d6924e474d authored almost 9 years ago

geom_tiplab2

git-svn-id: https://hedgehog.fhcrc.org/bioconductor/trunk/madman/Rpacks/ggtree@115882 bc3139a8-6...

9b8b0e98a8589ebf8551474fa3a3a75372c0d2c1 authored almost 9 years ago

geom_tiplab2

f9f734eb95d64cd2bc317c776f32292d98140034 authored almost 9 years ago

update news

10669192690f5d148a248593df63baa61c140d5e authored almost 9 years ago

update news

git-svn-id: https://hedgehog.fhcrc.org/bioconductor/trunk/madman/Rpacks/ggtree@115877 bc3139a8-6...

cb0ed4c2174067c49b1586ab5b9c25a5306346f7 authored almost 9 years ago

update news

git-svn-id: file:///home/git/hedgehog.fhcrc.org/bioconductor/trunk/madman/Rpacks/ggtree@115877 b...

d8db8bdaf1813a11277107a0233fe8b8d3bb4299 authored almost 9 years ago

use plot$plot_env

99d141e9f8dcefcb477396c45f6a5d4662936f50 authored almost 9 years ago

use plot

git-svn-id: file:///home/git/hedgehog.fhcrc.org/bioconductor/trunk/madman/Rpacks/ggtree@115874 b...

68ddfe1a26281c71ccc6e4f2b557cd8f0e10c337 authored almost 9 years ago

use plot

git-svn-id: https://hedgehog.fhcrc.org/bioconductor/trunk/madman/Rpacks/ggtree@115874 bc3139a8-6...

f15cdabd866a9e02ff2e8b2ee3fb8292190f7e93 authored almost 9 years ago

doc code consistent

f36449b1070ec09626c7b13f1e0d952bba441504 authored almost 9 years ago

doc consistent

git-svn-id: https://hedgehog.fhcrc.org/bioconductor/trunk/madman/Rpacks/ggtree@115866 bc3139a8-6...

8bd06e57f9dab0742f8c06d25a997646cc6f2eb8 authored almost 9 years ago

doc consistent

git-svn-id: file:///home/git/hedgehog.fhcrc.org/bioconductor/trunk/madman/Rpacks/ggtree@115866 b...

c1936a5dee54fb13de6a5f5fa06e20d53c5d53e2 authored almost 9 years ago

taxalink

1b1351467b23bc704685e02d01aac969e05a212c authored almost 9 years ago

geom_taxalink

git-svn-id: file:///home/git/hedgehog.fhcrc.org/bioconductor/trunk/madman/Rpacks/ggtree@115593 b...

0a97b0e8a3cb899454d3a6be3079b46d1a89062b authored almost 9 years ago

geom_taxalink

git-svn-id: https://hedgehog.fhcrc.org/bioconductor/trunk/madman/Rpacks/ggtree@115593 bc3139a8-6...

f49139320eab703f1accb413ef8e753ae3bee7a4 authored almost 9 years ago

geom_range

git-svn-id: file:///home/git/hedgehog.fhcrc.org/bioconductor/trunk/madman/Rpacks/ggtree@115592 b...

0bd36b2a86768f895efb78b2a70838a75f1d33d6 authored almost 9 years ago

geom_range

git-svn-id: https://hedgehog.fhcrc.org/bioconductor/trunk/madman/Rpacks/ggtree@115592 bc3139a8-6...

5971a62887cf9947043da2f4537f02743973fede authored almost 9 years ago

geom_range

68259affea5cf910ad5f6be23bdb19efc2d5a0fc authored almost 9 years ago

update README

git-svn-id: https://hedgehog.fhcrc.org/bioconductor/trunk/madman/Rpacks/ggtree@115026 bc3139a8-6...

40108ce1e780ae5f6718e5a8d2cf9df52ced9b33 authored almost 9 years ago

update README

git-svn-id: file:///home/git/hedgehog.fhcrc.org/bioconductor/trunk/madman/Rpacks/ggtree@115026 b...

f0ae9bf7f6b10684622a46ed545b627960ab3a26 authored almost 9 years ago

update docs

efee9ff992fe488d0013b91d0b24c839e3160dc8 authored almost 9 years ago

update vignette

git-svn-id: https://hedgehog.fhcrc.org/bioconductor/trunk/madman/Rpacks/ggtree@114636 bc3139a8-6...

ac5b3c6ff64210058b73526315222b9f7dc7d302 authored almost 9 years ago

update vignette

git-svn-id: file:///home/git/hedgehog.fhcrc.org/bioconductor/trunk/madman/Rpacks/ggtree@114636 b...

3243921ce95f977c4dd4c5b7ff64599d4dc62e9a authored almost 9 years ago

update vignette

b507b90a6d5ffcc55e6a265605e093a147e8dbe7 authored almost 9 years ago

family parameter in geom_cladelabel

ecbfdaade908d45a51ac2063d66f921976f3ca9b authored almost 9 years ago

add family parameter in geom_cladelabel

git-svn-id: file:///home/git/hedgehog.fhcrc.org/bioconductor/trunk/madman/Rpacks/ggtree@114634 b...

49838f3368a9dd0ca62504d9c3d422bbe0ced9b8 authored almost 9 years ago

add family parameter in geom_cladelabel

git-svn-id: https://hedgehog.fhcrc.org/bioconductor/trunk/madman/Rpacks/ggtree@114634 bc3139a8-6...

81323aa9c175d692537ac954550e0c116a9e36bb authored almost 9 years ago

update docs

git-svn-id: file:///home/git/hedgehog.fhcrc.org/bioconductor/trunk/madman/Rpacks/ggtree@114602 b...

1f24f0fcabc76f9c1860a5147ad5fa84deaa2391 authored almost 9 years ago

update docs

git-svn-id: https://hedgehog.fhcrc.org/bioconductor/trunk/madman/Rpacks/ggtree@114602 bc3139a8-6...

4ec6863da15e72efb357501a08856eed41fb9fbf authored almost 9 years ago

update vignette

16e1b451fa7dc3f86815806dcd55b7df170dabc1 authored almost 9 years ago

update figure

0febc70eb591ed6268868f4d0e573eaa16a82853 authored almost 9 years ago

geom_tiplab works with collapse

git-svn-id: file:///home/git/hedgehog.fhcrc.org/bioconductor/trunk/madman/Rpacks/ggtree@114270 b...

0cf0c570a5fedcd92d29ffae55fecf700c9ae51f authored almost 9 years ago

geom_tiplab works with collapse

git-svn-id: https://hedgehog.fhcrc.org/bioconductor/trunk/madman/Rpacks/ggtree@114270 bc3139a8-6...

b0e1dc30852f5334ec3a7039ae0c65dbbf866d26 authored almost 9 years ago

update news

80d7cf1637a0b532d3ed326c3f31c13646343805 authored almost 9 years ago

geom_tiplab works with NA values, compatible with collapse <2016-03-05, Sat>

4bd77ea8b6fc5b97d94d411ce03da79aca853020 authored almost 9 years ago

typo

git-svn-id: file:///home/git/hedgehog.fhcrc.org/bioconductor/trunk/madman/Rpacks/ggtree@114268 b...

b193b421f38f7025db4779b3f997ae76f1fa8075 authored almost 9 years ago

typo

git-svn-id: https://hedgehog.fhcrc.org/bioconductor/trunk/madman/Rpacks/ggtree@114268 bc3139a8-6...

d01756372db557c48b6dd4ce49cc181800b226c2 authored almost 9 years ago

typo

1e7e83f9941c2b2e8f307de09519d072e7375edb authored almost 9 years ago

theme_tree2

205342094cf1aed78c882a33d4303f360478d0bf authored almost 9 years ago

update theme_tree2

git-svn-id: file:///home/git/hedgehog.fhcrc.org/bioconductor/trunk/madman/Rpacks/ggtree@114267 b...

2a711f87aba505d97869659f87c5144d8b304ea6 authored almost 9 years ago

update theme_tree2

git-svn-id: https://hedgehog.fhcrc.org/bioconductor/trunk/madman/Rpacks/ggtree@114267 bc3139a8-6...

53eefadd8032138f0b0af470a7d8d7abc8d05a3d authored almost 9 years ago

fixed check

git-svn-id: https://hedgehog.fhcrc.org/bioconductor/trunk/madman/Rpacks/ggtree@114159 bc3139a8-6...

a17e358383467de212a698a5ee04b08f190b8bf1 authored almost 9 years ago

fixed check

git-svn-id: file:///home/git/hedgehog.fhcrc.org/bioconductor/trunk/madman/Rpacks/ggtree@114159 b...

a744c1d2e2c881fb1f0d8c16299fad40f428bcde authored almost 9 years ago

fixed build issue

79274631e4dc8f4d930ec2e78d4fdf1eacb086b4 authored almost 9 years ago

add forum link

8b0243cce3ef288a13911bff2bb8844de1cf9409 authored almost 9 years ago

offset works in align=FFALSE with annotation_image function

bf0c23e72c1afef273461124367cd1a2d4af1c60 authored almost 9 years ago

offset works in align=FFALSE with annotation_image function

git-svn-id: file:///home/git/hedgehog.fhcrc.org/bioconductor/trunk/madman/Rpacks/ggtree@113924 b...

5d4e7548280b91773761c86d9252450d6900f4ef authored almost 9 years ago

offset works in align=FFALSE with annotation_image function

git-svn-id: https://hedgehog.fhcrc.org/bioconductor/trunk/madman/Rpacks/ggtree@113924 bc3139a8-6...

5665130c5a0e4ae74376859bfc7c3137387033ae authored almost 9 years ago

inset with image files

git-svn-id: https://hedgehog.fhcrc.org/bioconductor/trunk/madman/Rpacks/ggtree@113922 bc3139a8-6...

451196c4c9470719704b7648e022a163b0b720d0 authored almost 9 years ago

inset with image files

git-svn-id: file:///home/git/hedgehog.fhcrc.org/bioconductor/trunk/madman/Rpacks/ggtree@113922 b...

37f7a26a168cbd667dfb059a85ee772e138c2ed5 authored almost 9 years ago

inset with image files

8a263d500a6d4c807caf9b4ee2210c4899e31608 authored almost 9 years ago

update links

git-svn-id: file:///home/git/hedgehog.fhcrc.org/bioconductor/trunk/madman/Rpacks/ggtree@113736 b...

0ad8b71342d31c1f5c2b435baa2bf820e5a5fdb1 authored almost 9 years ago

update links

git-svn-id: https://hedgehog.fhcrc.org/bioconductor/trunk/madman/Rpacks/ggtree@113736 bc3139a8-6...

7f2f3535155b39ee7aa1ff4b81d6281e525f035b authored almost 9 years ago

update links

d819f15ba9fc721bf275caf962799353bbf95ddd authored almost 9 years ago

new features

git-svn-id: https://hedgehog.fhcrc.org/bioconductor/trunk/madman/Rpacks/ggtree@113679 bc3139a8-6...

90df068e8f8c9f865b675ff59be5f2c9292ea814 authored almost 9 years ago

new features

git-svn-id: file:///home/git/hedgehog.fhcrc.org/bioconductor/trunk/madman/Rpacks/ggtree@113679 b...

e4ea056a8bbf3b10e6e13cca5b28b405a8530eb6 authored almost 9 years ago

bump up version

d7f5ba48ac4ddb50b2ef3f4d22fa5a7703fb7682 authored almost 9 years ago

add example of rescale_tree function in treeAnnotation.Rmd <2016-02-07, Sun>

e4b01202a15d8350785a9822e9ff39794fcfe164 authored almost 9 years ago

geom_cladelabel work with collapse

3c60e28699728a5286a36554cd662e807a86b7bf authored almost 9 years ago

'test'

160777ebfd0300f3e2fa48b157bd645b167cdec5 authored almost 9 years ago

new geom_tree

369499d9149f118bf1f742ea304fb36e105f87eb authored about 9 years ago

colnames level in gheatmap

1c9427367f34cbcc63d892f9468a2ad11ed33d8c authored about 9 years ago

raxml2nwk

fd19f748399d512a149217c9bb7a78a01dee4bcb authored about 9 years ago

solve issue 36

4b401e9ca684fc100c38769bd10e9bca66d773fd authored about 9 years ago

trouble shooting

f3a55204d3a06cc81658ac5c99b952853b895c52 authored about 9 years ago

typo

1a099d24d46deef7cb6b58806dcd3a68da061053 authored about 9 years ago