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github.com/astropy/halotools

Python package for studying large scale structure, cosmology, and galaxy evolution using N-body simulations and halo models
https://github.com/astropy/halotools

Switched appveyor environment to 3.7

8bb92d6f33f4f8f3caa33b5a80b2e5b9b8d71697 authored about 5 years ago by Andrew Hearin <[email protected]>
Removed travis testing for python < 3.7

7d7c5cf038d2dc819516cfbf9108aa17d0b6b62a authored about 5 years ago by Andrew Hearin <[email protected]>
WIP PR to get travis tests working again

8bcf74bc4735a064bd50f757aeb1e99f8cfe8acf authored about 5 years ago by Andrew Hearin <[email protected]>
Merge pull request #969 from aphearin/h5py_warnings

Resolved h5py warnings

0f40e0cab822eba11d057f813c2f8f7d89452725 authored about 5 years ago by Andrew Hearin <[email protected]>
Resolved all warnings due to h5py.File function changing default behavior

2e8c4a5156006e82e6b6a83ccd4b26117a1d28b9 authored about 5 years ago by Andrew Hearin <[email protected]>
Merge pull request #942 from bsipocz/update-helpers-v2.0.10

Update astropy-helpers to v2.0.10

f6718e07e305c30c248c824813589786e8a7c27e authored about 5 years ago by Andrew Hearin <[email protected]>
Merge pull request #967 from aphearin/scipy_update_bugfix

Resolved bug in hod_from_mock

29350b09ad192c49f78929fb5adf7370883e75dc authored about 5 years ago by Andrew Hearin <[email protected]>
Merge pull request #968 from aphearin/doctest_bugfixes

Resolved warnings raised by doctests

8030869e33eadaffbb6d7ebd368ebbb7ba2f22ab authored about 5 years ago by Andrew Hearin <[email protected]>
Resolved warnings raised by doctests

5c8209e4b4eb3d862f2ecd454b2e158ec47a973c authored about 5 years ago by Andrew Hearin <[email protected]>
Resolved bug in hod_from_mock caused by change to scipy default behavior for None arguments

40b746465079caa94d7409c776653d52d8ef102a authored about 5 years ago by Andrew Hearin <[email protected]>
Merge pull request #966 from aphearin/language_level_settings

Added language_level=2 switch to cython code

25a1a02975a2b2880b21de137ce163c15e423775 authored about 5 years ago by Andrew Hearin <[email protected]>
Resolved cython warning related to use of negative indices inside C array declaration

6445bc71eb5489340ce85bf2f322c9e5764c5f59 authored about 5 years ago by Andrew Hearin <[email protected]>
Added language_level=2 switch to cython code

cfd514dfef8e9845ab9dcaaa2e8f3afc9ec1925a authored about 5 years ago by Andrew Hearin <[email protected]>
Merge pull request #943 from aphearin/wp_jackknife_testfix

Shortened length of wp_jackknife doctest

560785eba17bbe6d909ee159ca373db6985d4fdb authored about 5 years ago by Andrew Hearin <[email protected]>
Merge pull request #964 from aphearin/np_warning_bugfix

Changed profile parameter indexing to use tuple rather than list

48f229ffd91517ec8a41906fd171a3687c9eeee4 authored about 5 years ago by Andrew Hearin <[email protected]>
Relaxed test requirement

7e6a09401bce4594c5679fd43fb2fd529c312550 authored about 5 years ago by Andrew Hearin <[email protected]>
Changed profile parameter indexing to use tuple rather than list, to address #963. Thanks to @johannesulf for finding the simple fix.

c128adce4743560226acab71c5d69ce3b648a774 authored about 5 years ago by Andrew Hearin <[email protected]>
Merge pull request #955 from aphearin/mean_delta_sigma_dev

Mean delta sigma

2caca51da42191fdeb6979acb30c96657a2e546e authored about 5 years ago by Andrew Hearin <[email protected]>
Added deperecation warning to delta_sigma function

9cfa3094769cfa30714f7d97dc09812bb0f254ec authored about 5 years ago by Andrew Hearin <[email protected]>
Erased unnecessary imports

2d8d25e5442685c827e11d59902738675c2974d5 authored about 5 years ago by Andrew Hearin <[email protected]>
Improved docstring

bb9201e74ccbcf038e5500b3e5869c2dfc3f3ca5 authored about 5 years ago by Andrew Hearin <[email protected]>
Finished unit-testing and SV-testing the new halo_radii feature to the 1-2-halo decomposition of the lensing calculation. Everything checks out, so time to clean up and merge

9bc369b4881ea9556e10ebf98d7195cd1ddc7e3f authored about 5 years ago by Andrew Hearin <[email protected]>
Added working version of Rhalo-based 1-2 halo decomposition of DS calculation. Still needs SV testing

43090f81608a399a99e14f5b7b87ca2334b48f5c authored about 5 years ago by Andrew Hearin <[email protected]>
Added in feature to calculate 1-2 halo decomposition. Passes non-trivial unit-tests, but suspicious behavior on SV test. Need to implement Rhalo-based calculation in order to confirm whether there is a problem

27bfc3257e27704a3a30f119979c6a65d2d698a7 authored about 5 years ago by Andrew Hearin <[email protected]>
Added support for no-PBC option

e0786dfdad55199646e0848ff4379f4cc6636183 authored about 5 years ago by Andrew Hearin <[email protected]>
Added failing test showing that mean_delta_sigma does not yet support non-periodic boundary conditions

26a10479262192f1e4f7448db6a55635cd0f5b1a authored about 5 years ago by Andrew Hearin <[email protected]>
Ported over unit-tests from delta_sigma to mean_delta_sigma

7a9121de394951034e1b20ef2e3ea515afbad655 authored about 5 years ago by Andrew Hearin <[email protected]>
Fixed bug in docstring of mean_delta_sigma function

b796642293076f80b6be4a8f3f4632f8c68779b0 authored about 5 years ago by Andrew Hearin <[email protected]>
added per object calculation

309b6eb9def3e50338b61135160798a75deced67 authored about 5 years ago by johannesulf <[email protected]>
introduced mean_delta_sigma

3f8bbcd4da2444673c3071a4a0ebf1f133748ca0 authored about 5 years ago by johannesulf <[email protected]>
Merge pull request #950 from Christopher-Bradshaw/autocorr-counts-in-cylinders

Provide a way to do an autocorrelation in `counts_in_cylinders`

2513e4dbe3c3e77edbe1cbb5703c25fb47b6867c authored about 5 years ago by Andrew Hearin <[email protected]>
Provide a way to do an autocorrelation in `counts_in_cylinders`

761fa7572697ced67c3b35c0263fdadca1bf1525 authored about 5 years ago by Christopher Bradshaw <[email protected]>
Merge pull request #945 from bsipocz/six_switch_to_standalone

Switch to standalone six

d46b93734f312fbcd8ef8d39bb479b0fb747ed6f authored over 5 years ago by Andrew Hearin <[email protected]>
Fixing pytest plugin imports

f487191a6ec6fc58856c87bda3c26e4bcb5df2a6 authored over 5 years ago by Brigitta Sipocz <[email protected]>
Switch to standalone six

bfd1234816e4c78a872719f527ef3b1a3f71956e authored over 5 years ago by Brigitta Sipocz <[email protected]>
updated readme

00f1c14e54821d681423490bc736410a82483716 authored over 5 years ago by Duncan Campbell <[email protected]>
removed relative imports

e213c99a45a18a1a641b80044ed59b32fcf956f1 authored over 5 years ago by Duncan Campbell <[email protected]>
Shortened length of wp_jackknife doctest

191de7cf51f8672316217b8ebeebc3b99e38e3c6 authored over 5 years ago by Andrew Hearin <[email protected]>
Updated astropy-helpers to v2.0.10

5f2ae1f42be39aeaa1ec9b37692a9f2e8fc0c1db authored over 5 years ago by Brigitta Sipocz <[email protected]>
Merge pull request #925 from syrte/master

fix bug in docstring of `wp_jackknife`

00227cee8ec1e2bbaa01db8ac98272beff403076 authored over 5 years ago by Andrew Hearin <[email protected]>
Merge pull request #930 from Christopher-Bradshaw/minor-docs-update

Update some docstrings + error messages

1c7403852703c7b22912354a8ff764f90bf8ad52 authored over 5 years ago by Andrew Hearin <[email protected]>
Merge pull request #931 from Christopher-Bradshaw/fix-inconsistent-return-idx

Fix inconsistent return idx

21dd57647a37c7e545156ff0917b93fe2667953b authored over 5 years ago by Andrew Hearin <[email protected]>
Merge pull request #924 from bsipocz/update-helpers-v2.0.8

Update astropy-helpers to v2.0.8

4f670aa4cd9f45593696fbfd8c56bfbc4c9be72d authored over 5 years ago by Andrew Hearin <[email protected]>
Merge pull request #938 from astropy/error_msg_smhm

Improved error message of Behroozi+10 model

aa0abc0bf609c3c6cf84de3dfdc846cb2c0fbed7 authored over 5 years ago by Andrew Hearin <[email protected]>
Merge pull request #918 from rainwoodman/mock-model-cycles

Remove reference cycles between MockFactory and ModelFactory.

6ce9862aeeddc6c83625c27e54b38d4fc4e8de6a authored over 5 years ago by Andrew Hearin <[email protected]>
Merge pull request #922 from rainwoodman/patch-1

fix for numpy 1.15 indexing changes

3a35033507062a65591eb3dee1ef734751f2e8b6 authored over 5 years ago by Andrew Hearin <[email protected]>
Improved error message of Behroozi+10 model for cases where the lookup tables have infinite values

e8b61a8bb02c8282a14292951772ed1fd947ba0c authored over 5 years ago by Andrew Hearin <[email protected]>
Merge pull request #937 from mclaughlin6464/master

Make zheng07_components compatible with Assembias models

3259d4ab6ec61624701046811c7dcbf90896db4e authored over 5 years ago by Andrew Hearin <[email protected]>
Make zheng07_components compatible with Assembias models

83b38b8fdf842dabbf36b23a09ca1eb181b62de1 authored over 5 years ago by Sean McLaughlin <[email protected]>
Merge pull request #928 from bsipocz/update_astropy_init

Package-template update: _astropy_init.py

29f5e3495f4d924b8b80e12bb18d7ba8d47420ce authored almost 6 years ago by Andrew Hearin <[email protected]>
fixed bug

ba2d4cefec7415da8a2a0ad8603231f8be3585bb authored almost 6 years ago by Duncan Campbell <[email protected]>
Fixes the __init__.py for python3 compat

I think you need the . there, my python complains if it's not there

7f87c464c813beb6ba302348879811ec394f9a03 authored almost 6 years ago by Francois Lanusse <[email protected]>
2e32 != 2^32 brainfade

e3641ff110b26201c8bd318ce3857a73fce2dd8b authored almost 6 years ago by Christopher Bradshaw <[email protected]>
The returned value was not an array if there was only one pair

This was due to the that axis being squeezed if there was only one
object in it.

7bd2cae1dc46fd58347dbb0afa8f6fdf25796ef3 authored almost 6 years ago by Christopher Bradshaw <[email protected]>
Update some docstrings + error messages

b0f259f43eff5c6bd41d7c8533cb8cd325793f7c authored almost 6 years ago by Christopher Bradshaw <[email protected]>
Package-template update: _astropy_init.py

5379c097af37979638bcee5bb36b15f84bfd69a3 authored almost 6 years ago by Brigitta Sipocz <[email protected]>
fix bug in docstring of `wp_jackknife`

73ecde657373deb61fc19cb16ec5be7f10df697d authored about 6 years ago by Syrtis Major <[email protected]>
Updated astropy-helpers to v2.0.8

997f2a16b74963a03ae1f18925558bd2aea8c81a authored about 6 years ago by Brigitta Sipocz <[email protected]>
fixed bug

7d76ca58fe6564669c695a48159be43ed7d055fc authored about 6 years ago by Duncan Campbell <[email protected]>
added feature to angles between vectors

cfdf4a3299468e14146ac09c1385394a88f044f2 authored about 6 years ago by Duncan Campbell <[email protected]>
fixed bug in random perp vectors function

ecc71d09b6bbcf2406aabaa8bfc959f32b83a2e4 authored about 6 years ago by Duncan Campbell <[email protected]>
fixed bug

8802c0bf295de4832d8a7d591da2bb2b6a0313a5 authored about 6 years ago by Duncan Campbell <[email protected]>
updated doc string

14f4b7f4516b2363c4f190a3ab4bebdd85ae0415 authored about 6 years ago by Duncan Campbell <[email protected]>
removed print statement

7a12db4961827605b3338c2c5f2a0c73a07e0433 authored over 6 years ago by Duncan Campbell <[email protected]>
expanded doc string

0290d3bdf102bb029d4c147009ec5df0f062bac7 authored over 6 years ago by Duncan Campbell <[email protected]>
updated readme

fcad2ab49985c6578125a89925357ae37e7a0ccb authored over 6 years ago by Duncan Campbell <[email protected]>
updated tests

5eef73c07d5fdfd55a0d30bd2a2cc43176b8bcd9 authored over 6 years ago by Duncan Campbell <[email protected]>
moved rotate vector collection to its only file

56441702a0801e6349434151abd4c1e15433b1aa authored over 6 years ago by Duncan Campbell <[email protected]>
fixed bug in 2d rotation matrix from vectors

0792eb6c0d331a6af2a2436e4d72ea4912ba2aa5 authored over 6 years ago by Duncan Campbell <[email protected]>
fixed bug

0d4b9d138e1d63d18a4ae63ba2a7e8cf8cef6dcd authored over 6 years ago by Duncan Campbell <[email protected]>
merged changes

de026734c502af33fd9e96401c425d505a298f53 authored over 6 years ago by Duncan Campbell <[email protected]>
small changes

11fc5159ff0c4afa804894c923771b44c7b47dfa authored over 6 years ago by Duncan Campbell <[email protected]>
fixed bug in 2d rotation matrix function

a17f9a0c3cb4c60993fb64f43f631d9e93bd97c2 authored over 6 years ago by Duncan Campbell <[email protected]>
fixed typo in doc string

8529c17e77f7792d03e3272cf4f945329407e13f authored over 6 years ago by Duncan Campbell <[email protected]>
fixed typo

3ee97ccc3c5401c7a9801e4078aca65ffac2d9fb authored over 6 years ago by Duncan Campbell <[email protected]>
added tests

d1e1df97fbebde6b9c4576194cf0cc1e9ab71b2e authored over 6 years ago by Duncan Campbell <[email protected]>
fixed bugs and added tests for mc rotations

b2a90f7e7a284ad5d6290ea60a50faa88b01742d authored over 6 years ago by Duncan Campbell <[email protected]>
fixed typos in doc strings

2e98ebb689e2a59428597ea6ff82f62e63666925 authored over 6 years ago by Duncan Campbell <[email protected]>
fixed typos in doc strings

d543292e0d1550ba3091301725f214b175c14d18 authored over 6 years ago by Duncan Campbell <[email protected]>
added tests

9cfb0a990f3349a137f9115d867a8156e7277374 authored over 6 years ago by Duncan Campbell <[email protected]>
fixed bug

ec470b496aae6152edceba385c2e938680f211c2 authored over 6 years ago by Duncan Campbell <[email protected]>
fixed bugs

58b3a4af4f5d4688e218e12c79786ec9a41cb09c authored over 6 years ago by Duncan Campbell <[email protected]>
updated readme

f07bf996a2519bd9c176cf43759aef2060b63227 authored over 6 years ago by Duncan Campbell <[email protected]>
reorganized

e566f33b69578da87187a4099bf39c08d68d109b authored over 6 years ago by Duncan Campbell <[email protected]>
renamed mc file

851a27331e03ae141a93c90b170de834c68f1014 authored over 6 years ago by Duncan Campbell <[email protected]>
seperated mc functions

bda308d7ca956d2fabc21bd0dbd64757ec42ff4d authored over 6 years ago by Duncan Campbell <[email protected]>
updated readme

301fcda2e79cd79f27bd400be53bb2603aebda23 authored over 6 years ago by Duncan Campbell <[email protected]>
ignoring pytest cahce

c79a696765beba2d18e55c7e45186f661a1475e6 authored over 6 years ago by Duncan Campbell <[email protected]>
fixed numpy error

5135447312617c6960522850995e40a67b3a004f authored over 6 years ago by Duncan Campbell <[email protected]>
add ginore file

b887c284ac436d4d7287dd4d0ec356c047f70d43 authored over 6 years ago by Duncan Campbell <[email protected]>
seperated 2 and 3d operations

817e4ca3ab834ab7236c950f3c7ab5cfdca7b157 authored over 6 years ago by Duncan Campbell <[email protected]>
added in most of the code

de2cd127829ea30831f42b94fa48202486e7bba0 authored over 6 years ago by Duncan Campbell <[email protected]>
added readme

34fa092aa85275311608a11c123fd23ae5d8eeb5 authored over 6 years ago by Duncan Campbell <[email protected]>
fix for numpy 1.15 indexing changes

This PR is intended to fix the following warnings:

build/testenv/lib/python3.6/site-packages/...

cddfd5ff469422ef84730172ad5af84dc61dab44 authored over 6 years ago by Yu Feng <[email protected]>
Merge pull request #921 from aphearin/abunmatch_config

Change default behavior of return_indexes feature of conditional_abunmatch

94f0fe4c61035c242c71f9f2a41db025250c25c5 authored over 6 years ago by Andrew Hearin <[email protected]>
Merge pull request #903 from yymao/preserve-ngals-dhod

HOD mock preserving total number of galaxies (and relative deviation) when a seed is specified

b5b98e0b9b36b046bc677a7bea07dfaf79d4575e authored over 6 years ago by Andrew Hearin <[email protected]>
Rewrote test_no_subgrid_noise_with_return_indexes to accommodate API change

21b753419b448871d04cfaf197b76b6e7425c6f3 authored over 6 years ago by Andrew Hearin <[email protected]>
Changed default behavior of conditional_abunmatch so that add_subgrid_noise is automatically set to False when return_indexes is True

84f3c5c8303a92550a8947a68518ea38c28f4e74 authored over 6 years ago by Andrew Hearin <[email protected]>
Add comments about the cycles and assumption.

b1c05fd1bc3123ecde0aa2d6e59c85f356e01f2a authored over 6 years ago by Yu Feng <[email protected]>
Added forgotten import of sys module

17fb9aa66f25722dd6c2ea28e13506cdb41063d7 authored over 6 years ago by Andrew Hearin <[email protected]>