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github.com/astropy/halotools

Python package for studying large scale structure, cosmology, and galaxy evolution using N-body simulations and halo models
https://github.com/astropy/halotools

Figured out how to structure scatter functions. Still not implemented

049cf3a6223183596e589923bcfb29a5fe8ac9d6 authored over 9 years ago
Still refactoring for scatter case

c26a09bb2c8ef026d4a2b70e74d909b87f957606 authored over 9 years ago
Now drawing randoms for scatter case

8c046e9b3b6da6a50e9058fa797517dd6dbd97d2 authored over 9 years ago
Starting to add in scatter

9eab4370e4c5797f5a9077df762c7d90198724b5 authored over 9 years ago
small changes

226d096f885be14392b95356912b6bb438ae5fc3 authored over 9 years ago
Now have apparently working version of zero_scatter_relation

3732344781fd2f2ab5c34f0a44cf192a0b953db3 authored over 9 years ago
Added in-line comment as a marker for where I left off

27ab9c02e35fa71219b892ce25bba3f719bae6b8 authored over 9 years ago
Still debugging zero_scatter_relation. Need to figure out numpy's convention for nested fancy indexing

534d4927e4d55fbbd9562ccc726189cb6d99a569 authored over 9 years ago
Debugging zero_scatter_relation. Currently returns identically zero values

f6493f634a8177db7ad19bf2aadc7b0854755f88 authored over 9 years ago
Now handling edge cases with reasonable robustness

39eb7f0fc154e97eaf900340d6c4338ec5758324 authored over 9 years ago
Debugging the one point lookup table builder

82475c103ce7c4796e0b02d8703bbe7df50377f7 authored over 9 years ago
Empty lookup table entries are now filled with their closest neighbor's lookup table

3692196554c291ae7464ad16386f43b454c1e4c2 authored over 9 years ago
Fixed bugs in one-point table build

ab5a0af13cee6cee34cfd633c327813187fb33db authored over 9 years ago
Debugging cam to deal with edge cases of sparsely populated bins

bcaeca9b67c7aa8d91e042cb6bfa7fb18945ea26 authored over 9 years ago
Added new_haloprop_func_dict functionality to ConditionalAbunMatch

9701d12b5b5270f26cde441fa27d186d2ca77157 authored over 9 years ago
Modified docstrings

f6c5c555c453b4b98fc89c11e90e4fe3bfa14ea3 authored over 9 years ago
Finished draft of ConditionalAbunMatch

f1b50944664c48c7de3b0f92d67f586f8530d07d authored over 9 years ago
Finished draft of zero_scatter_relation. Still needs testing

51b697dcea6ded817b45fb41edb08f108bffcfbd authored over 9 years ago
Fixed incorrect sub-classing for cam

e7a25e2bce40ea0123ade31f89c88aaa3a90390d authored over 9 years ago
Reorganizing to have an abunmatch module

249d47d223df62965a293de483bce5606915afa9 authored over 9 years ago
Merge pull request #80 from aphearin/primgalprop

All model components now sub-class PrimGalProp

16f866ca398533ecf2b99ca2fc6679a7e797c95d authored over 9 years ago
Turned profile models into GalPropModel sub-classes

fe2dd7cf33b7dcea6f6cff74e212fce0fcbf2bae authored over 9 years ago
Replaced all references to occuhelp

5ec5a591f70a8c0ad7b1fe50984484484e2c53f7 authored over 9 years ago
Renamed occupation_helpers

97cc23de597c8151d5fdd472397bf71a79a9b950 authored over 9 years ago
Refactored all model components to derive from a mostly trivial occuhelp.GalPropModel

7f961cee6dea135a22888fb3ff9608d7a2c390a9 authored over 9 years ago
Merge pull request #79 from aphearin/subhalo-models

Subhalo models

c0326f603769d0d709f654c2812b5759a031f84a authored over 9 years ago
Modified docstrings and added in some in-line code to explain how the param_dict of MosterSmHm works

1dc16ae2dd44a302905d3c549abd66e538a29c53 authored over 9 years ago
Modified docstrings

481eaad9fe207ecefd31c22def6114a1334c9610 authored over 9 years ago
Finished building pre-loaded bueprint for SmHmBinarySFR

f217527a7b08c9d3c3094fc2e94f1b5ef3ae01f2 authored over 9 years ago
Docstring edits

eb625c0bb6c511d0c82ab6f5637260c0d900a972 authored over 9 years ago
Modified random snapshot so that it has mpeak.

decd27510e212cfe31722c876b236207088cd69e authored over 9 years ago
Simple fix to bug in mock population. This bug revealed that composite model's .populate_mock method has no testing

efe5ba4cfec622a2b2f04dac50364f1c87c6a5d6 authored over 9 years ago
Discovered bug in mock population. Still unfixed

823e9cce295b7b3a7cc4d7898fc8dd9492329de1 authored over 9 years ago
Added simple test function of binary galprop interpol model

94a58a2cd35d590b3325ad21740943864160f03a authored over 9 years ago
Changed container class from smym to primgalpropmodel

91fa72bdbd0e18625f5d7436410a31b5d4b6ea92 authored over 9 years ago
Sub-classes of SmHm now have the option to define their own mc_galprop method

d40e634a2c3cfcfe800649502219f30e9486dbb0 authored over 9 years ago
Generalized the SmHm model to permit alternative galprop keys

30d99e7d7688a0753db78e958b133ee56904b6c6 authored over 9 years ago
Modified docstring to sham class

e874b04f04436665df8ef448c5e69937f6d5e556 authored over 9 years ago
Developing placeholder class for traditional abunance matching

e4824f88cc666ae8dfb7b82873386359d8f19c44 authored over 9 years ago
edited test suite for some tpcf functions

dd8611f217f10769eb3b49647cff4c82625bf349 authored over 9 years ago
Merge pull request #78 from aphearin/leauthaud-hod

Leauthaud hod now implemented

3edf4b4cb258e4fb19d94ac15657ca8f4b1fed25 authored over 9 years ago
Modified docstrings

ab81ad0eb1ecd055b0c6eb9bb2d31dc2cf99c525 authored over 9 years ago
Now have working version of Leauthaud11Sats

49e1ff0c548719f5afd7620436105a7bb37241df authored over 9 years ago
Changed awkward calls to _update_param_dict. Method now is more consistent with the rest of the package, via use of functools.partial

a0225577da74130408a7ae0457f4bd13ff71b81d authored over 9 years ago
Fixed param_dict propagation for Leauthaud11Cens

a392553acee4df29b00b33892a7b462efc421a66 authored over 9 years ago
Scatter model is now penultimate

071f2640fd7f41513fde5cdb9dcca9f694aa2005 authored over 9 years ago
Cleaned up scatter model a bit. Now using occuhelp.update_param_dict

c1b55fa0b942bc59a5a41451440efee2d5f42b86 authored over 9 years ago
Starting to build doctests for smhm components

5d394b1821a199278a0a30e853f66153064ee160 authored over 9 years ago
Still reworking basic API. Need to develop test suite before anything useful can be done

f3ec845eddda97c9ba43456e02cc30b2d4f25202 authored over 9 years ago
Beginning to make significant changes to API of smhm models. Current commit is clean

425cf769e4c77f92ccf7074190cd4819465a84e7 authored over 9 years ago
Implemented optional galaxy selection function

d94aa65515768aefac37ddb5d9794946a624f9dd authored over 9 years ago
Minor docstring modifications

ac18c788103424d2c2d3e16e33f01258491b5658 authored over 9 years ago
Docstring modifications

4cbf8b516b5640fb01d261d5dbaa79e14d96e401 authored over 9 years ago
Many docstring edits and doctests added to Kravtsov04Sats

488885237ef84a8639b975c5e18b4759f4b1fa81 authored over 9 years ago
Added doctests to Zheng07Cens

3381c1ddcd65c4b52b3eb6f5ce2161bb1c1d953a authored over 9 years ago
Occupation components now must call mean_occupation using prim_haloprop keyword. mass keyword is no longer supported.

2c1de85c90238c80cdb40e3e46aa4d22c70266c1 authored over 9 years ago
Cleaned up occupation_helpers module

7e7ef98ef1be5a0021a86200772ff34aab9e92a0 authored over 9 years ago
Changed constructor of MockFactory to use occuhelp.bind_required_kwargs

22942e91cbbed8ccaf90a3eba5648939bd9a076a authored over 9 years ago
Changed some more default behavior in occupation component

5e41f44c659c0296aa8f27c6570ad03c71aff1b7 authored over 9 years ago
Changed calling sequence for random number seed in occupation component

13bd73f2ff5f01b0dee911f0b4929874c88181db authored over 9 years ago
Added in occuhelp.enforce_required_kwargs

c8090baa2a527e7f39149c2442426ed5c871b160 authored over 9 years ago
Reconfigured kwargs calling sequence for occupation components

2c981ae6cbd394b32063dceaf28e0ffc4270116c authored over 9 years ago
Changed Kravtsov04Cens to Zheng07Cens

e485217ca91acd4f97ea0f403b9f8938ff795cdb authored over 9 years ago
Cleaning up docstrings and API of hod_components

d3a4edc628605afbad2af5b3ad5b76978bb4f713 authored over 9 years ago
Changed haloprop_list to be a private, rather than public, attribute

ca00465a178666ab1e5d18287eef14349ad8edf8 authored over 9 years ago
new_haloprop_func_dict is now only an attribute if it is non-trivial

343e304f3be0df9ce35eb901a88c8f4729356555 authored over 9 years ago
Refactored init constructor of hod mock factory to robustly include new_haloprop_func_dict

b1b25fe4a73a775652119e5af7984c0f68e985ed authored over 9 years ago
Fixed minor bug in abhod_components.py. Added call do docstring of random_downsample.

5a5f01b75ef47d5650eac6cd456574c46058efd4 authored over 9 years ago
Merging abhod_development after completing Heavside Centrals

42401699eb268f3f08e6151f29b5fd4654ce1a4f authored over 9 years ago
Trying to merge from upstream.

796bced928fb9ee8a3fae3172105e0855eb91517 authored over 9 years ago
Committing upstream merger.

78cb223d836756cb41776a0e039027a3246fc9d5 authored over 9 years ago
Now have working skeleton of Leauthaud11-style HOD. Only partially finished.

Still have lots of work to do on parameter passing/updating. Satellite model
is really just a sk...

972e7294daf5d6562f8260f88f9e3e9e1b384315 authored over 9 years ago
Appear to have working version of Leauthaud11

81ed5c6770c9eaa62a1718fa9333bfd0b207a3aa authored over 9 years ago
Merge pull request #75 from aphearin/master

Added in random downsampler

2bf5e2498d22d93e1236e642499a6351012f8540 authored over 9 years ago
Added in random downsampler

61458c501570af63b2737025763358aa110d58a1 authored over 9 years ago
Made sure that my methods take the halos keyword

5d07b6f75f5955e99f3fe5e917db1cedec8e3d4e authored over 9 years ago
Complete first draft of central assembly bias class.

fd4311ce0d191cbc04c9a2730ac06b5828fe0649 authored over 9 years ago
Merge pull request #74 from aphearin/master

Changed param_dict to input_param_dict in OccupationComponent

14e30b5f9e548ade5197ad760c1d79e3303249d5 authored over 9 years ago
Changed param_dict to input_param_dict in OccupationComponent

16dc99ae47df04966c15712097a6ab0afc87345e authored over 9 years ago
First draft of central assembly bias module.

c274cd640cd3e7056c23274a90074dd3a21c84c2 authored over 9 years ago
Merge pull request #73 from aphearin/subhalo-modeling

Subhalo modeling

2ce4778b07485b96a8ced5aaa578364445c0dc00 authored over 9 years ago
Fixed bug in doctests

f08fadd0990f84bfffc24064a4c77a15e2ac4bde authored over 9 years ago
Began incorporating assembly bias model into halotools.

20dbbfdfa9d9c73d3d08d7e5972631402944f4d8 authored over 9 years ago
Composite subhalo model now successfully populates with quiescent galprop and stellar_mass galprop

90016adbe78638e9281e834e02ffaf6cd373057d authored over 9 years ago
Finished refactoring BinaryGalpropInterpolModel to be a subclass

096dc8eec5b6c09c5c413fdfceb5f5be246d1eff authored over 9 years ago
Developing BinaryGalprop into a full-scale feature

514d669a3ed3fa0832bf21b34a1875c6b68dd0bb authored over 9 years ago
Update setup.cfg github_project

was previously "aphearin", but should be "astropy". This is for the "edit_on_github" button in ...

9de19ce0f6a2f69217ba17fe324a881b5feef4cd authored over 9 years ago
Got rid of awkward way of ensuring galprop sequence. This is the burden of the user now

6cd09f280a72f6a2be6fa39374268c4dcf56b84d authored over 9 years ago
Minor docstring edits. Also added in 'galid' property to subhalo mock

f4f3de3ef1f9897dc801fec645f0c13ea596195a authored over 9 years ago
Merge pull request #71 from aphearin/master

Many new model and mock factories added

30f25025edb9c277317161f5145e39d4c35b6bf7 authored over 9 years ago
Rebuilt tutorials

166fa3d2462ef04e849cba27962ccabb8f2df2c6 authored over 9 years ago
Renamed mock_factory module to mock_factories

5172630cfbcc1c672ae4243507d14efac09bfa47 authored over 9 years ago
Deleted now-obsolete subhalo_model_factory

053111c051a955c92d9bbe9c7968b734c5f58a3c authored over 9 years ago
Deleted now-obsolete hod_factory module

4890e88d643d7cb46eb864faca41b577c65e8358 authored over 9 years ago
A grep on hod_factory now comes up blank

eb86d43c89ea1457e5b137b019084b8756ad3f97 authored over 9 years ago
Refactoring the model factories to sub-class the generalized ModelFactory

7416422d05d3ba03799395a86c1d874d17ed114c authored over 9 years ago
Changed test of pbc to be inclusive of boundary

461b9816390103799d745674954b3a6385226f2b authored over 9 years ago
Docstring edits and minor changes to BinaryGalpropInterpolModel

36a505fc73dd6c58e2e47a78d278c33ad4800885 authored over 9 years ago
Finished first draft of BinaryGalpropTemplate class. Still needs a test suite, but it's in reasonably good shape.

454670d284d0835edd66dc4da9b5face93edb568 authored over 9 years ago
Changed name aph_spine to custom_spline

00a9edbf9e3d1712a7bc7f3aa5bdb134d0114034 authored over 9 years ago