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github.com/astropy/halotools

Python package for studying large scale structure, cosmology, and galaxy evolution using N-body simulations and halo models
https://github.com/astropy/halotools

Merge pull request #997 from alanxuhaojie/master

Update Cacciato09Cens

5d0c39d7685b16cc8d7aadbd68dfd62f3867a36f authored about 4 years ago by Andrew Hearin <[email protected]>
Change prim_galgrop_max value in the test

There are 2 tests in this unit test. After the sign correction, the first test passed, and by lo...

019a061e7ffe18e7790e1227504ad32401349506 authored about 4 years ago by Haojie Xu <[email protected]>
Correct Cacciato09Cens for sign assignment

The test failed due to a wrong sign assignment. It should work now.

a1a66ab6c423a4d3f852865ddc60b8a7f3c474b0 authored about 4 years ago by Haojie Xu <[email protected]>
Added basic unit-test of new prim_galprop_max keyword argument. @alanxuhaojie let me know if you have other ideas for ways to ensure code correctness for this nice new feature

08376f4ba7ef3a465dd2fa52a38fccf0669a13d7 authored about 4 years ago by Andrew Hearin <[email protected]>
Changes brought in by python-black

1b5e2791f6d1f97e1e2f665ba5d15c5ec2597411 authored about 4 years ago by Andrew Hearin <[email protected]>
Update Cacciato09Cens

Add 'prim_galprop_max' keyword arguments in Cacciato09Cens

7baa8ca093a3439de43864ca832c42e2d00b61f9 authored about 4 years ago by Haojie Xu <[email protected]>
Merge pull request #996 from aphearin/non_poisson

Add support for non-Poissonian satellite occupation statistics

17c90be66f48f470a40995f8f933b8fe0a27f204 authored about 4 years ago by Andrew Hearin <[email protected]>
Added unit-test and fixed bug

7dac3645112a5b917f55d6e5ba40d9c11abda115 authored about 4 years ago by Andrew Hearin <[email protected]>
Changes brought in by python-black

72494330b28b0c9ab9cb4b9bbc8046c772c6ae71 authored about 4 years ago by Andrew Hearin <[email protected]>
Added support for _weighted_nearest_integer second moment

803d3e75347170d9f7c2d7384b79854792f9d215 authored about 4 years ago by Andrew Hearin <[email protected]>
Changes brought in by python-black

1c440a124230c44b4feb473d3c4d1a36d5f6f834 authored about 4 years ago by Andrew Hearin <[email protected]>
Merge pull request #995 from aphearin/mdef_bugfix

New keyword argument supports user-defined halo boundary

5494db4bc41be549f625eb3275a8163907080a30 authored over 4 years ago by Andrew Hearin <[email protected]>
Docstring update

9856360ac0167b325f6a7ae757df325ea0afbc72 authored over 4 years ago by Andrew Hearin <[email protected]>
Added new keyword argument halo_boundary_key allowing users to override the enforcement of consistent column names between halo mass and halo boundary

d3abd0a3ea14e9b8a4152d274c56c80584d071cb authored over 4 years ago by Andrew Hearin <[email protected]>
pep8 changes made by atom

de727d3073e8a3057b31f705c95b8ce89c027c23 authored over 4 years ago by Andrew Hearin <[email protected]>
Added new unit-test reproducing error reported by @jmsull and @rainwoodman

e851791b60de8528c880adee108202d70322ffae authored over 4 years ago by Andrew Hearin <[email protected]>
Changes made by atom

ac7db4baca5990890c88e14cdfa15736e094f710 authored over 4 years ago by Andrew Hearin <[email protected]>
Merge pull request #992 from duncandc/rotations_devel

Adding vector rotation utilities to halotools.utils

4fb8558da7d63c34e297c2fd62ea61308970d9de authored over 4 years ago by Duncan Campbell <[email protected]>
moved some rotations3d functions into vector_utilities and updated tests.

0e8b5e93db6395fa9fe46e88060c78b7028b2281 authored over 4 years ago by Duncan Campbell <[email protected]>
removed test of group-wise calc and replaced it with option 2 test

4886d391b9dd309ae3ecdee241fada49cf4893bb authored over 4 years ago by Duncan Campbell <[email protected]>
removed external import error

010bc96af264e7ff74c44a1f37d92cd22dd7aa5d authored over 4 years ago by Duncan Campbell <[email protected]>
improved doc strings and tests

6ebd9b1fe6c8801145874eef64ddd368c1c7aa63 authored over 4 years ago by Duncan Campbell <[email protected]>
removed group-wise rotation option

1aa28d3e2f8505f16d5485537abcde6c7efdac76 authored over 4 years ago by Duncan Campbell <[email protected]>
fixed external package import error

904665edca51fe56ebf2ef89f89add38f77881c5 authored over 4 years ago by Duncan Campbell <[email protected]>
improved doc strings and testing

1e0750706d6c86bd41900d6f1e61e0416c77cc4f authored over 4 years ago by Duncan Campbell <[email protected]>
improved doc strings

ced904c1493c30d791c6788d26565d55b2c665f4 authored over 4 years ago by Duncan Campbell <[email protected]>
incorporated rotations and tests into utils directory structure

7620ff83c2576337316ab1c2027f65c085599a9e authored over 4 years ago by Duncan Campbell <[email protected]>
fixed merge conflicts with rotations

81b30a20747622eb52f6aae35d6c471b0ef654b3 authored over 4 years ago by Duncan Campbell <[email protected]>
moved code into rotations subdirectory

10330af3ed1018790667bf18a812e0174297d07c authored over 4 years ago by Duncan Campbell <[email protected]>
Merge pull request #990 from duncandc/master

fixed python 2 specific code

5cde82cc5bc219b79be6df1392785112ce775f68 authored over 4 years ago by Andrew Hearin <[email protected]>
Merge pull request #988 from pllim/pytest-ignore-import-errors

MNT: Ignore import error in pytest collection

96a943bdf927d6284e17b16884b3b496ee71d6a3 authored over 4 years ago by Andrew Hearin <[email protected]>
Merge pull request #1 from EiffL/patch-1

Fixes the __init__.py for python3 compat

8cce5be1521614615aede91a620b1fcf15794c4c authored over 4 years ago by Duncan Campbell <[email protected]>
fixed python 2 specific code

92ea970ab912a1635d182165346fdd3ecddb93a1 authored over 4 years ago by Duncan Campbell <[email protected]>
MNT: Ignore import error in pytest collection

9f4149ab17208341157f58d4f3f52ff7f6656b5f authored over 4 years ago by Pey Lian Lim <[email protected]>
The condition feature of counts_in_cylinders is now compatible with return_indexes=True. Added unit tests of this functionality

8e51c2187dd3624c303fde4b5b14f576056d87e7 authored over 4 years ago by Alan Pearl <[email protected]>
Merge remote-tracking branch 'upstream/master'

771e7a6a780c05b561573d9e401ed52c76a98be7 authored almost 5 years ago by Andrew Hearin <[email protected]>
Merge branch 'master' of https://github.com/AlanPearl/halotools

d47be7b60cdfe229a4423262814277ef4cf218d7 authored almost 5 years ago by Alan Pearl <[email protected]>
Updated counts_in_cylinders() to accept kwargs: condition and condition_args. _counts_in_cylinders_process_args() now automatically converts position arrays to 64-bit, as required by the cython engine

9f21b101415f8c92e041835e3fcc8a22007de478 authored almost 5 years ago by Alan Pearl <[email protected]>
Updated counts_in_cylinders() to accept kwargs: condition and condition_args. _counts_in_cylinders_process_args() now automatically converts position arrays to 64-bit, as required by the cython engine

c85111393ad14b8262cbcc60e5a3a831ac312420 authored almost 5 years ago by Alan Pearl <[email protected]>
Updated installation instructions

0edb2939df3e677aea1e33bb23515a37edf3a204 authored almost 5 years ago by Andrew Hearin <[email protected]>
Updated docs to match v0.7

1ea556e7b7c56e62f3df39e09cc085a3d45c79a7 authored almost 5 years ago by Andrew Hearin <[email protected]>
Updated changelog

33b7cd04d96eada3446f3c47575a268a6df60901 authored almost 5 years ago by Andrew Hearin <[email protected]>
Preparing release v0.7

63c7be76b0252880702d87ff33e1f9a205734433 authored almost 5 years ago by Andrew Hearin <[email protected]>
Finalizing changes for v0.7

1d6b570aceff5820d24eefc61f4870de5abd8fb0 authored almost 5 years ago by Andrew Hearin <[email protected]>
Merge pull request #986 from aphearin/mcnfw

Relaxed requirement that monte carlo realizations of NFW profiles must respect a SO mass definition

ec5c0289f1719aee3c7eaad88410ba6fd5f4459f authored almost 5 years ago by Andrew Hearin <[email protected]>
Relaxed requirement that monte carlo realizations of NFW profiles must respect a SO mass definition

c8ca340f4a68091842db134097ed5b13ef286b2b authored almost 5 years ago by Andrew Hearin <[email protected]>
Merge pull request #984 from aphearin/installation_docs

Updated installation instructions

8a722a6a6bf9a7e6540ebd56fb2c5adce56d9a19 authored almost 5 years ago by Andrew Hearin <[email protected]>
Merge pull request #983 from aphearin/wp_tutorial_bugfix

Fixed bug in wp tutorial

c99ae8aac81cae48b57bc910eaf9bbf7e3f50eac authored almost 5 years ago by Andrew Hearin <[email protected]>
Updated installation instructions

186f5dd1849d61d88db734ddff271c6daf33cac6 authored almost 5 years ago by Andrew Hearin <[email protected]>
Fixed bug in wp tutorial pointed out in #947

6f3862e39d494cbb43da9a1aa004f038e55c3fc1 authored almost 5 years ago by Andrew Hearin <[email protected]>
Merge pull request #980 from aphearin/remove_delta_sigma

Remove delta_sigma function from repo

50298710738b80fc8f8a2643215f4671e2917004 authored almost 5 years ago by Andrew Hearin <[email protected]>
Updated changelog

be0a43ed92665783f3ccf165a155560ce116b1a8 authored almost 5 years ago by Andrew Hearin <[email protected]>
Changed API of mean_delta_sigma to use effective particle masses

c3b61435f91094cda253d9b4bf1077fa69e42e50 authored almost 5 years ago by Andrew Hearin <[email protected]>
Updated notebook on calculating lensing to reflect mean_delta_sigma, resolving #954

ab2c3bc858e8229d165b10fc9eca2e65ffd7fe23 authored almost 5 years ago by Andrew Hearin <[email protected]>
Changed delta_sigma references in docs

deeb775e34f7d1f95b210d40a594e1c9167eda16 authored almost 5 years ago by Andrew Hearin <[email protected]>
Added basic unit-testing of mean_delta_sigma

9509dac16cfd8bd491ae7df0d0fb221ee80dbd8b authored almost 5 years ago by Andrew Hearin <[email protected]>
Removed delta_sigma from repo

c99eac3107a03dd42795d2dbdab6d64411306d53 authored almost 5 years ago by Andrew Hearin <[email protected]>
Merge pull request #978 from aphearin/py3_reader

Implemented python 3 fix to TabuarAsciiReader

cff3de388da362248df410976349f1043a727876 authored almost 5 years ago by Andrew Hearin <[email protected]>
Merge pull request #979 from aphearin/delta_sigma_api_change

removed 1-halo 2-halo decomposition of delta_sigma from repo

6cd17a9e1f8946f286d9cee6150ce539fc29b8e7 authored almost 5 years ago by Andrew Hearin <[email protected]>
Fixed bug in test suite of TabularAsciiReader

7e88a78d311a7af208ddeb021a596d999d09db6e authored almost 5 years ago by Andrew Hearin <[email protected]>
removed 1-halo 2-halo decomposition of Delta sigma from repo

b97d4150a047763aba9584e95f8d2ffee6929d63 authored almost 5 years ago by Andrew Hearin <[email protected]>
Implemented python 3 fix to TabuarAsciiReader suggested by @saitosmst

d58e73a8998271942729f321fa7fb481a6272282 authored almost 5 years ago by Andrew Hearin <[email protected]>
Merge pull request #976 from aphearin/remove_rot_matrix

Removed matrix_operations_3d from repo

af93f0477249a73eab3eab6fc0ff43ded854933a authored almost 5 years ago by Andrew Hearin <[email protected]>
Removed documentation references to now-deleted matrix operations modules

25c9eb04cffa86701ca29fdffc9ea32255a536b3 authored almost 5 years ago by Andrew Hearin <[email protected]>
Removed satellite_rotations module

c6b084cf340ca163f8f182c10df4a4b5a7edf8f9 authored almost 5 years ago by Andrew Hearin <[email protected]>
Removed matrix_operations_3d from repo

05cd75d51ea82e1a89436a42490725e54c7f771e authored almost 5 years ago by Andrew Hearin <[email protected]>
Removed forgotten imports from deleted modules

99d5a95d8eb2e70e25af9799ba5568f6ce7d3276 authored almost 5 years ago by Andrew Hearin <[email protected]>
Merge pull request #977 from aphearin/reduce_warnings

Reduce testing warnings

836edf03a0ae32cda84e51a99cbae7a3017af21c authored almost 5 years ago by Andrew Hearin <[email protected]>
Eliminated warnings due to complex models

33a521e7cff7ffe4f0df608bfb06289c5423d2d5 authored almost 5 years ago by Andrew Hearin <[email protected]>
Registered installation_test

a95c43a2b53e2a4d10aea4091522afcda20f38d6 authored almost 5 years ago by Andrew Hearin <[email protected]>
Registered slow pytest marker

c3717a2f55cc5ba86fec659b8545c14a896e6893 authored almost 5 years ago by Andrew Hearin <[email protected]>
Eliminated warning raised by halotools/mock_observables/pair_counters/test_pair_counters/test_npairs_jackknife_3d.py

662d0fd64f272d6b40dace901582bfbe4ca16d5b authored almost 5 years ago by Andrew Hearin <[email protected]>
Fixed warning in test_process_weights1

a497a7d0067f1824a0ef89758917aa810d085c1c authored almost 5 years ago by Andrew Hearin <[email protected]>
Eliminated warning issued by test_mass_in_cylinders

d22cf962dfffdd43889da45bbe28efb581d4c35f authored almost 5 years ago by Andrew Hearin <[email protected]>
Eliminated warning from test_angular_tpcf2 function

c457b203247cb569d24f2064d46d5ad85e735b6c authored almost 5 years ago by Andrew Hearin <[email protected]>
Now protecting issue of warning by process_optional_input_sample2 so that no warning is issued if do_cross is already False

b23d6a19daefc37e5bcf8680ada71a0fa31f114b authored almost 5 years ago by Andrew Hearin <[email protected]>
Eliminated warnings raised by test_tpcf_jackknife.py

13cf6ac4d7b26ee21d0f636bbbf0fb3221feb24e authored almost 5 years ago by Andrew Hearin <[email protected]>
Eliminated warnings raised by test_wp_jackknife.py

5eab816d3b62d17f8d4a6e7077552250c1f4f7e6 authored almost 5 years ago by Andrew Hearin <[email protected]>
fixed bug in error message of mock_observables_helpers

d1e73e307bb2eab58cebd6a2a43ec55247a0788b authored almost 5 years ago by Andrew Hearin <[email protected]>
Eliminated warning from _pairwise_velocity_stats_process_args call

686b96b153f07c33a980e6c4024dd4753c1d2d3d authored almost 5 years ago by Andrew Hearin <[email protected]>
Changed all uses of np.matrix --> np.array inside all covariance matrix calculators. I think this is harmless, but checking with @duncandc whether there may have been a good reason for np.matrix in the first place.

9a959b75e712e5a291e99ca7cba6d4afc9b31777 authored almost 5 years ago by Andrew Hearin <[email protected]>
Merge pull request #973 from aphearin/halocat_attrs

Fixed bug in CachedHaloCatalog treatment of simname

ae3387cbe4576d92e853f4efd9d1a3264b1d8586 authored almost 5 years ago by Andrew Hearin <[email protected]>
Merge pull request #962 from Christopher-Bradshaw/docs-readthrough

Docs readthrough [WIP]

784dde136353e8e68e02eb6eb28b5acddd875fe6 authored almost 5 years ago by Andrew Hearin <[email protected]>
Utilized existing compare_strings_py23_safe and _passively_decode_string functions to resolve #953

838e6a766c67dd5c5c9bfca5e552ae491085f1f5 authored almost 5 years ago by Andrew Hearin <[email protected]>
Added new failing test enforcing presence of num_ptcl_per_dim

a3788f4a98d44f7f232cdd3195ff17da42ad0466 authored almost 5 years ago by Andrew Hearin <[email protected]>
Merge pull request #972 from aphearin/neg_one_corr_cam

Fixed bug in treatment of noisy_percentile=-1 edge case.

b8198cfe5a634c0d1016c330af37232cad064f5d authored almost 5 years ago by Andrew Hearin <[email protected]>
Merge pull request #971 from aphearin/zero_halos_support

Include support for empty user-supplied halo catalogs.

62724e7d880a03bb5c3a8f5aa91e1e70422c9b76 authored almost 5 years ago by Andrew Hearin <[email protected]>
Fixed sphinx reference bug

f8c7372ebf42150d52e885d150c5c02a6a288ffb authored almost 5 years ago by Andrew Hearin <[email protected]>
Fixed bug in treatment of noisy_percentile=-1 edge case. Resolves #939. Agreed, @mclaughlin6464?

33946ddc493bebb276ead99d46c161b09e0e39e0 authored almost 5 years ago by Andrew Hearin <[email protected]>
Include support for empty user-supplied halo catalogs. Resolves #960

cbe3190f93a3e1adb9adf13d9a9af37dec96f004 authored almost 5 years ago by Andrew Hearin <[email protected]>
Resolved duplicate getting_started label

c00a984e722435fb8e9f7bb5a004816fe29cfe35 authored almost 5 years ago by Andrew Hearin <[email protected]>
some other stuff...

63db1c8d765f286c96a75c8dd74e3c78d6435292 authored almost 5 years ago by Christopher Bradshaw <[email protected]>
more info in CAM docs

b74a1ecaaee1a80de15913b5e2db61d4733f1be4 authored almost 5 years ago by Christopher Bradshaw <[email protected]>
Remove changes to approx_cell1_size

d2b810b21fa916276c31f2fa9f2feb01c97a2d57 authored almost 5 years ago by Christopher Bradshaw <[email protected]>
cleanup comments to self

65bcb335b9530556b73ecf8e96ea43e934844187 authored almost 5 years ago by Christopher Bradshaw <[email protected]>
lots of unused verbose

96a761c4eb526d5f2fc8f94d0d1fbf6aaf12e583 authored almost 5 years ago by Christopher Bradshaw <[email protected]>
first look

c2b50bcd7095255de4d04185e0e46ecfad187919 authored almost 5 years ago by Christopher Bradshaw <[email protected]>
first draft at getting started docs

d57974cac5b93b6e7dfaff05573b242a694f6c0d authored almost 5 years ago by Christopher Bradshaw <[email protected]>
more docs

82f2d2f62325e8e6c7b27f616ddf802966033127 authored almost 5 years ago by Christopher Bradshaw <[email protected]>
Merge pull request #970 from aphearin/travis_bugfixes

Remove testing on Travis for python < 3.7

ce9bf4ecd65ddde64b2d32dd6f31ace89bbfff49 authored almost 5 years ago by Andrew Hearin <[email protected]>