github.com/Blosc/bcolz commits | Ecosyste.ms: OpenCollective

factor out generating the chunk file name

73c68dd33c2629a8111e4459c1318c1d77bcf6bc authored over 9 years ago

Merge pull request #199 from esc/vh/refactor/modularize_getting_schunkfile

factor out generating the chunk file name

1eb01a450234681df00bb23504ced52548a43c73 authored over 9 years ago

Merge pull request #198 from esc/vh/refactor/use_chunks_iterator

start making use of the chunks iterator

6e3e796a4a6d72193bd60ce8635557777177c681 authored over 9 years ago

start making use of the chunks iterator

0a920ed0459b03382ffc435932498e0198841383 authored over 9 years ago

Merge pull request #153 from FrancescElies/chunks_it

Chunks class iterator

2b5b5a70896bb3b42147a2ef3febf74d6cc79ea2 authored over 9 years ago

Changelog

e880fe251e8ca488fc9daf4b6f5504663fa7c1bd authored over 9 years ago

test: chunks iterator

be619e2dae861172efd147185f62cc25968e0541 authored over 9 years ago

cunks iterator

1bf7f210463b4eefcc435e58f17aa65e2b14131f authored over 9 years ago

Merge pull request #194 from esc/vh/rebase/193

Rebased version of #193 (pickle for in-memory)

8605f1f2fb4c832a2f343f3183d3657d405e52b4 authored over 9 years ago

RELEASE_NOTES entry

fd77647f221ecddcc5caaa324967484658eea5d0 authored over 9 years ago

some refactoring to avoid duplication (and increase spaghetti factor)

5328c59d4d1b1314100422247c27982d977bf466 authored over 9 years ago

shorten the pickle tests

c70673e4aaddba163869c6d1686f6db41b6a00c4 authored over 9 years ago

removing superflous whitespace

43cd7e5016649da0ec7f5b3d2d9ec697aa5c0641 authored over 9 years ago

revert erroneous uncomment

dcf16f045939973ffdb63b2a2317d82a68af330b authored over 9 years ago

using assertIsInstance instead of assertTrue

9f4b2e3c9bcad6edaae4c5942e6e243811325067 authored over 9 years ago

adding pickle mechanism without rootdir #182

f23c0aebb70bab9da0010efdb1b35947c6aead59 authored over 9 years ago

make a note about ==

1be392e01aad8b3feb75c9536a47bb151d699e39 authored over 9 years ago

erroneous whitespace correction

48c3b703a5ac36e018516d4c30f9ae009ee93367 authored over 9 years ago

Merge pull request #190 from esc/vh/fix/naming_in_docs

Minor: docs still refer to carray name

716633beb5b3782313757ad46d0bbb0d5228323b authored over 9 years ago

fix outdated reference

94ce1d9bfd3447183c319dcdb5caeee97c518c45 authored over 9 years ago

Merge branch 'vh/post/v0.9.0'

* vh/post/v0.9.0:
clear ANNOUNCE.rst
open changelog
bump versions

48fa1c90f89738f0773e7ea66f8ac224a929488d authored over 9 years ago

clear ANNOUNCE.rst

1f753cd897c99cead03962198e0efb2914e6f366 authored over 9 years ago

open changelog

824bf0e0241d5b1ba8e2533d8c2cba42acd72b54 authored over 9 years ago

bump versions

fd7d20c9b5252a4d341bedd61094faf25797757f authored over 9 years ago

Merge branch 'vh/release/v0.9.0'

* vh/release/v0.9.0:
mention scikit-allel
Fix repr test on Windows.
better, more Windows f...

ca6496a7ddc74370269c84e92fbdc530a67c360d authored over 9 years ago

mention scikit-allel

abff383f62c5f90a1207b7bdfc34ed616f722be9 authored over 9 years ago

Fix repr test on Windows.

The Problem is that carray.len for size 0 will return a long on windows but an
int on linux and ...

86123ad9c2296e3b16cd7cbab4833705b501a10f authored over 9 years ago

better, more Windows friendly solution to creating a temporary directory

The Windows error with the previous implementation was:

Traceback (most recent call last):
Fi...

818db51e1e25d1f45d32853ef922761ab856ed22 authored over 9 years ago

bump version

ae8bd424ce0bc1e995501b2622a6ef2203c9546d authored over 9 years ago

update ANNOUNCE.rst

0a02474ff58cfbfe69c0e6cc47c98980c8e8451c authored over 9 years ago

tweak the changelog and add missing items

6b547c4f03bf3e876e0ef933f0ff068ccc50d379 authored over 9 years ago

Added a new benchmark for iterating columns

5ebe7c1411113eee04aaa60c25f93502aa1dd8fa authored over 9 years ago

Merge pull request #178 from brentp/ctable-strings

allow adding strings > len 1 to ctable

73da749354ea27e158d86695bb803c38c373e3a8 authored almost 10 years ago

python3 and formatting

402edac92776d5158b44f5f7299f09506733130e authored almost 10 years ago

allow adding strings > len 1 to ctable

a69e90441db91ce002f8f1791cbbc70ab693d827 authored almost 10 years ago

Merge pull request #171 from esc/vh/fix/docs

Refactor how the documentation is built.

8ce8e1ae14a4c0f1d1c3d09e642318f97e588c5d authored almost 10 years ago

modify maintainers makefile to be able to build docs from project root

83130a10d0ad154a1efbc959f22d42c275164114 authored almost 10 years ago

implementation of the context manager

51ed5f1e3e9d8e1534485f98c1f28637a5874e7d authored almost 10 years ago

simple test for the with statement

5109b99e718b1de48fce91943401e97ff499fcd0 authored almost 10 years ago

automatically document attrs too

7a0dd053815b5d5c03e4ed18bfd37db757773238 authored almost 10 years ago

autodoc ctable

f072a6e12cbf7c256df96479d80729d07a0eeafc authored almost 10 years ago

clean up docstrings for ctable

7466b8fb25a6fd950ccf36812c295110069d822f authored almost 10 years ago

fix incorrect use of numpy docstring

58252db39c3e8131a4541e1b6aa220e1375993d0 authored almost 10 years ago

refactor order and listing of utilities

18b4799f3121acff4a43b1683ca507b594a5c3d0 authored almost 10 years ago

select correct module when documenting

b6dba5625a9c90b7601addda7936f9a2c2b10d54 authored almost 10 years ago

fix docstring of ctable

cb14d46121171aa94576eb70db7ab0c5ef7384c1 authored almost 10 years ago

change order or top-level functions to be more meaningful

cc9a31d42707ba28af140e599d33af3d4bd8790d authored almost 10 years ago

fix sphinx headings

4e5783ce40edfe2e9e85eba53382fbb98cbef065 authored almost 10 years ago

automatically document cparams

04329fcf0c366cbd189ccae988ff7e12cbe0c717 authored almost 10 years ago

autodoc carray

a4c2a1e138d707cf43a4c484739238ccdb27fbeb authored almost 10 years ago

autofunction the top-level functions

6c01b4d5df4f86e272d4cdff6af0631cd2efeae9 authored almost 10 years ago

fix incorrect use of numpy docstring

957830f1eb2a6245168d702d582d5809a0d3f97c authored almost 10 years ago

autofunction utilities

6609baf7dd4b2675023a0a972b9d82d9519c6fb4 authored almost 10 years ago

don't build a toctree for numpydoc, all classes in one page

07dbcdd89c82e431f2f0315caab76ffdf64ded35 authored almost 10 years ago

insert the path to our built module, assuming build_ext -i

2575e641ee5cbf3cce91aa04dbe3066dc11eda9b authored almost 10 years ago

activate extenions for automatically documenting from docstrings

7972d65938f2a21f8d2a9e488fed80c38dc4bffa authored almost 10 years ago

remove spurious whitespace

bbd5d94b64545ed685a252dce330d57934bacb97 authored almost 10 years ago

fix a sphinx warning

1b7c4555eae9f2123723a2e610e8d59926f6886d authored almost 10 years ago

Merge pull request #170 from esc/vh/fix/copy_carray

issue regarding deletion of moved columns

ac521542cae40635fe9b0dcb83637ce3ca8c3e53 authored almost 10 years ago

fix issue

42ec9a8adf5782db2daa33c73e7631b635378c10 authored almost 10 years ago

expose issue #170 via test

7f72817565b9522aa5927499e14296fc6eed244e authored almost 10 years ago

Merge pull request #172 from alimanfoo/issue_136

Resolves #136

56dc09f523e886f4f01b9287c2f2f60c14044f14 authored almost 10 years ago

code style change as requested

83f6dcfa8bed496f63b89cf4de687c2ce45d9ce2 authored almost 10 years ago

remove accidentally copied test

fb85de12b0d004a1f164045aecb03af0336d04c8 authored almost 10 years ago

resolves #136

473406babb973e7cb1ba70606b0156fd94ec27a1 authored almost 10 years ago

Merge pull request #156 from esc/makefile

adding makefile

be4b73e441a3d896d286fff344d28fbb1c13a4f2 authored almost 10 years ago

adding makefile

2c08a85f1a446013099451c6581eb96f45f2a2f5 authored almost 10 years ago

Merge pull request #166 from mrocklin/avoid-segfault

Remove with nogil statement to avoid segfault

09550e207133af5cfe8e1deee73c0c555026af76 authored almost 10 years ago

update RELEASE NOTES around GIL/compression-decompression

46b6b59083b25dc44f76772e999fc420e164c2cb authored almost 10 years ago

add gil holding to release notes

94709f7b3e794210945de69f3656fa737731e202 authored almost 10 years ago

Remove with nogil statement to avoid segfault

In principle the old code seems correct. Sadly something causes a
segfault at these lines if ru...

f9dfe8c995661e96c318969dce3bf0d48bcec6c3 authored almost 10 years ago

remove nogil statements around blosc_*compress calls

273b2ab4a0b895a9ce0fcf9515d87e7e344fd9e3 authored almost 10 years ago

Merge pull request #168 from mrocklin/release-safe

add safe= to release notes

648b7f9019462fdfbbb1f379a720b0750ecaafea authored almost 10 years ago

add safe= to release notes

19ff67a57ae41b0317d661375105e0d813ea9447 authored almost 10 years ago

Merge pull request #163 from mrocklin/unsafe

Add safe attribute to carray

17178bbdfec451e56da1a2a4e084eab3eceec646 authored almost 10 years ago

fix docstring for safe

1527ea061f0fd67728d05f93231d7b80d838a846 authored almost 10 years ago

Shortcut safe=False path in carray.append

This gives 50% speed improvements on very small appends

bed6e57a9b7c3fecd2bb2b02c0903ce606aa98e0 authored almost 10 years ago

Add safe attribute to carray

This bypasses type, dtype, and stride checking in to_ndarray.
This is unsafe behavior for genera...

769c4f3abcf2e0082ea392db95a68dcd3b87ef6e authored almost 10 years ago

Merge pull request #157 from esc/vh/feature/badged-in-readme

adding badged to the README

56f1e596c312d3bf85777af14da945cb79a984f0 authored almost 10 years ago

adding badged to the README

9fd0d5c5e2b33a75ce41c42fbe23a3574729f9a7 authored almost 10 years ago

Merge pull request #159 from ARF1/pxd_installation

install carray_ext.pxd with the package

6adbf81e2be442d81d59429ea70c53aba4a1355d authored almost 10 years ago

updated RELEASE NOTES

aa66028b6994bcbf4e7d376bc5f3b78302eb0352 authored almost 10 years ago

install carray_ext.pxd with the package

This allows other packages to be cython compiled against the installed bcolz
package. Use case: ...

711ca373b68a35db3b765fcc02676818eda231f3 authored almost 10 years ago

adding test_requirements.txt

264477ca789beabee3082b7d969b07a8083045a2 authored almost 10 years ago

Merge pull request #154 from esc/vh/feature/disk_handling

Rebased 'disk_handling'

3cae9839c8b786bf8a13db1f00ead3cb5e9b0973 authored almost 10 years ago

update changelog

1495f5988c15027b7bbb3ceeedb3bd5147dcfedb authored almost 10 years ago

More FlushDiskTest using Mock

As proposed in https://github.com/Blosc/bcolz/pull/152#issuecomment-76683805

85fbec7daeacf74a6831d57c0a2e7218f8e30970 authored almost 10 years ago

FlushDiskTest ctable

eba804d9d022052466951e608a704002cdd73c86 authored almost 10 years ago

Added auto_flush (#127)

f7804c6a82b56bf0e139353ed5195aa36ae30be8 authored almost 10 years ago

Check for actual existence of rootdir when opening an existing disk-based ctable (#123)

f2b081f95068f0a708449a9c082f06fe8ab16086 authored almost 10 years ago

added smart copying or moving for a use-case where you add an existing diskbased carray to a diskbased ctable (See also #137)

1c2a9bc31bf5645d04a64091927247960a901511 authored almost 10 years ago

Purging: addcol and delcol also have metadata impact that should be written

f3c19ca560da410f1fda54e998e665e103cfc2f6 authored almost 10 years ago

Merge pull request #151 from esc/add-del-on-disk

Rebased and updated version of #112

e03f4e567c012fa3e61149d8c001994a5031d532 authored almost 10 years ago

update changelog

baa7be332f10ee4a0efd1afc58bb29d21b583260 authored almost 10 years ago

fix copy and paste fail in test docstrings

70acf6f8c9d421aa09bde6070c0d7e42437c21e1 authored almost 10 years ago

add keep keyword argument

23c11ef4bcf7b84891c413253159664b62a6d0fb authored almost 10 years ago

Copy if we pass in a carray

7b0c390120752857a0479cba45ce589abc4da1ad authored almost 10 years ago

Test that we copy when we pass in a carray

c85ce85675cf9a511b9be50f86cb09add2b384a0 authored almost 10 years ago

Add and del columns on disk when ctable is already on disk

ab687f814ba69642ade2cf93c13141275d374b6c authored almost 10 years ago

Add tests for add/del columns from an on disk ctable

e4f66b1b88e543f26105a02fb9b630bed8bb6b1f authored almost 10 years ago