github.com/scipy/scipy commits | Ecosyste.ms: OpenCollective

Merge pull request #15040 from Smit-create/14360_11

MAINT: Add test for SciPy's public API

Reference issue for this: gh-14360

Mostly taken ov...

579e6bdf5b41a0487143a42119f94e6af75386c4 authored about 3 years ago

STY: fix linter complaints

18e556ce099e143fafa9dd5de6f84ab10b3be238 authored about 3 years ago

MAINT: restore some `io.matlab` private attribute access

dfffbaba0b328be4917c223767de9fb4fcb26f47 authored about 3 years ago

bump to gcc 6 (6.3 is compiler version for manylinux_2_24)

ea56ecfc82db5c8fc7997d1a337393a31174e27d authored about 3 years ago

Merge pull request #15062 from ilayn/cythonize_tempita_unicode

MAINT:BLD: Open file in text mode for tempita

ee5d1dd7084c615e46d046dea7ef58bda0dab2d8 authored about 3 years ago

DOC: Update broken link to SuperLU library. (#15067)

f72cc95f4eb5cef207a2abd613640ca212a2e3d8 authored about 3 years ago

BUG: sparse: fix a DIA.tocsc bug

* Add a regression test
* Only copy over the final indptr entry when needed

266fb68172851ec55cd3144e9eb933681b0d4ea0 authored about 3 years ago

CI: bump gcc from 4.8 to 5

b5cb42630bd6e8f78ad9b1a6d0f2fd05c3392f27 authored about 3 years ago

MAINT: Fix access of private modules that should work presently

6a293610efbeb357aae9c7561bd3ebebaec3562a authored about 3 years ago

Merge pull request #15061 from ilayn/sparse_expm_imports

MAINT:sparse: expm() fix redundant imports

d4f273e76848a0de994927c744285f407ece7ae0 authored about 3 years ago

MAINT:BLD: Open file in text mode for tempita

fb79cc56d086303821815f5d8cc1aa7dd9d0f801 authored about 3 years ago

MAINT:sparse: expm() fix redundant imports

c1e1ec2069dba1ae97eb515481b214f96f4419b9 authored about 3 years ago

TST: remove obsolete deprecation warnings for wminkowski

This commit is best (re)viewed without whitespace changes

14c553bae1973e0bf47cbe7916550154cc64a07a authored about 3 years ago

MAINT: remove deprecated wminkowski

46504612850908768aebd459e39d30df08b53fb0 authored about 3 years ago

Add reminder to restore faster indexing code path

Slicing that results in 1D sparse arrays is currently unsupported.
There was one such case in `l...

ff00022c51b6e3cb084785882caabf05e46a95dd authored about 3 years ago

skip failing test for aarch

Fixes #15051

80e3238d92bc70ca50b3340f52b03149fc83892b authored about 3 years ago

skip failing test for win+32bit

Fixes #15052

8ba447a7c7e1d690d129754839df3c1ad298d21a authored about 3 years ago

Remove unused imports

c8a16fe9ff4a00001e6d3c2370d016a141a0d429 authored about 3 years ago

Use cast of eye(M) instead of generating dia_array from scratch

a19d6707af76dd3cd13e3614f5fd9a4bbddce010 authored about 3 years ago

Remove unnecessary brackets

38f86bc1d1d72c04becc14e2156f085a9c74640d authored about 3 years ago

Fix 2D array slicing

The following was broken before, for both matrices and arrays:

x[[[0, 1]], 0]

Also includes ...

d3d438fd88c05947e490411601a98ed950b1fc83 authored about 3 years ago

Merge pull request #14979 from liviofetahu/fix-spsolve-allocation

BUG: scipy.sparse.linalg.spsolve: fix memory error caused from overflowing signed 32-bit int inp...

9484b9dd6331ca121d2340fb60b8090f8eed67ce authored about 3 years ago

BUG: sparse.linalg: fix overflow in `spsolve` due to 32-bit int usage

Fixed the signature of doubleMalloc and particularly doubleCalloc:
possibly malloc needs to allo...

0d95f6b50e90d01f8bf31225e4ae03ef158d68e5 authored about 3 years ago

Merge pull request #15048 from andyfaff/diffev

DOC: make callback doc clearer

ff955f8bd142ca4924573ace168e0f55526bea93 authored about 3 years ago

DOC: make callback doc clearer

b6d3355af25fc87e78b7f0d2d33f16e68fae5a0b authored about 3 years ago

MAINT: random can only be used with scalar valued func

c41de3b1537efe6444fac3457ac61222854c8e7d authored about 3 years ago

Remove _array keywords on eye/spdiags constructors

c3e4ec597d857bcd5e37499622e2a2adcf697713 authored about 3 years ago

Rename dispatcher

15baba42ba58f60b76d6c65f5054bdc304fdc935 authored about 3 years ago

Make linter happy

25259a66ce68cde773f85e8d7ea89831f43e10e0 authored about 3 years ago

Add an array API to scipy.sparse

We add matching array classes for the bsr, coo, csc, csr, dia, dok,
and lil matrices. For each ...

82071b2120b1a54e5235a6940b02b0d9c6184594 authored about 3 years ago

Raise NotImplementedError on 1D slicing

We cannot support that yet, since we don't have a sparse array
container available.

6ac60be59812ee05209a0481f894a053158a726e authored about 3 years ago

Fix summation dimensions

e3215dca60bc57550d56886868de592ce1a69b2a authored about 3 years ago

Linting cleanups

a7c2bb2712a0029308e155106c54929603585d7b authored about 3 years ago

Add array tests for scipy.sparse.linalg

f1ca6e64e1fec9621b6974b84598145f1b786684 authored about 3 years ago

Add note to documentation about array interface

79a030ca0a5de53e39a29f16569eef079f5d4acb authored about 3 years ago

Make optimized build happy

84a62c90c882dadf1cd77963dc98f7359dbda289 authored about 3 years ago

Add documentation for sparse arrays

40c42d4d5db76d3696d53c10952104e1142158af authored about 3 years ago

Merge pull request #14817 from qbarthelemy/gzscore

ENH: stats: add geometric zscore

40fb834c9c42a268334c086da63820a016de2f14 authored about 3 years ago

DOC: 3D example for gaussian_filter (#15037)

Co-authored-by: Pamphile ROY <[email protected]>

1d80deaac2f55d20ddf8348265cb2b3be7c498ba authored about 3 years ago

MAINT: Use `_backend` to make it private and fix failing tests

de08460a7c47df1578c5128b4ff3f1fc4341ed49 authored about 3 years ago

MAINT: Add test for public API

0156319971681b30e95098cc3337fc8dcf1bf170 authored about 3 years ago

MAINT: Fixes for public API

3553d49efdb0e6c997661e1dab6a1594876d0e2a authored about 3 years ago

DOC: use numpydoc format for C function in `_superlumodule.c` (#15034)

I know this function is not directly exposed to users, but when trying
to auto parse all scipy ...

b4b606600faf8c780968e244e11b69f0f3ba00fe authored about 3 years ago

DOC: add missing "regularized" to `gammainccinv` documentation (#15007)

63d37e1f312bcd6957cdf679e726fb85496ffd43 authored about 3 years ago

Merge pull request #15029 from Smit-create/14360_12

DEP: Deprecate private namespaces in `scipy.sparse.linalg`

50e8aeacfa1e1b843100c7bdca7dfc338a8d43c4 authored about 3 years ago

MAINT: `sparse.linalg`: Use renamed files and add deprecation warnings

14020ff29c6620a7035b38456282d648b4a70f6a authored about 3 years ago

Merge pull request #15019 from andyfaff/gh12785

048bac7140040f27d81b1cc3b371640a1ec8c612 authored about 3 years ago

DOC: adding rst suggestion

Co-authored-by: Pamphile ROY <[email protected]>

12753bdf99297ecc2e23a44b4b1e174bdeff55f9 authored about 3 years ago

MAINT: Rename `sparse.linalg` modules and make them private

195b8284aaeef69067044f4c7cbe25bbb4d2a4e3 authored about 3 years ago

DOC: linalg: Fix a small condition doc error (#15027)

550b28e345623c79fa5a67a8873c3562326c0b3f authored about 3 years ago

ENH: limit check_grad

83c152fc416b662d9d7ab39034e7951601edb356 authored about 3 years ago

ENH: allow approx_fprime to work with vector-valued func

7b0fad8542708978915d2237f8e039905fd8ef8a authored about 3 years ago

Merge pull request #14857 from AtsushiSakai/add_maxfev_limitation_doc

DOC: optimize: add notes for max function evaluation constraint violation

416e129445a34f8cdd200cc6b24f05a6ba4cc808 authored about 3 years ago

MAINT: add notes on maxfun

c92453ffe367b69a70ab743cb31ffece34608429 authored about 3 years ago

DOC: optimize: add notes for max function evaluation constraint violation.

4dbe285d9955f1734dfb1b54a517da249f5d5bfb authored about 3 years ago

Merge pull request #15022 from tupui/doc_optimization

DOC: mitigate newton optimization not converging.

2dabc2450362f3d3d214c58c107250ac6b4b2478 authored about 3 years ago

PEP8

58a1b7cb7987424e91a0230fbb5755333c97a494 authored about 3 years ago

DOC: rst table fiddling

7eecec7b8cd1172fe3b97b59b5e0e96828726846 authored about 3 years ago

DOC: fix rst

5ffb72961d7a725989eade2108dc8a9f576d8ebd authored about 3 years ago

DOC: table for method specific hess options

d7acf75e721eb070b4e6e39f418658fd62879a02 authored about 3 years ago

Merge pull request #15023 from larsoner/ci

CI: Unpin Sphinx

1f0cd312e1617df1631cf347619ac8cae58765be authored about 3 years ago

CI: Unpin Sphinx [skip azp] [skip actions]

c2b512ce55b258c0f6194a199b28e7cfa5a85985 authored about 3 years ago

ENH: Make `get_matfile_version` and other `io.matlab` objects public (#15004)

173214226b1e96c5abdc4e4eb561710ef29f1479 authored about 3 years ago

Merge pull request #14941 from AtsushiSakai/issue_8774

ENH: optimize: add optional parameters of adaptive step size adjustment in `bashinhopping`.

fa58cce11efb2ca39fd903fcaaaa6c6347b3f7ac authored about 3 years ago

ENH: optimize: change arguments name, update doc, add input validation, and test it.

de34d65cf3b09ded3cf01c3545bd1105560a41cc authored about 3 years ago

DOC: mitigate newton optimization not converging.

[skip azp] [skip actions]

066dd39d18e3ac59acdeeca7112fb6b05817b8d6 authored about 3 years ago

MAINT: Fix use-after-free in Py_FindObjects (#15013)

e32fc2329d3dd23298725153c5b2cc7fcd0f14f1 authored about 3 years ago

ENH: sparse.linalg: Fixed the issue that the initial guess "x0" is changed by "lsmr" (#15020)

829f5c56945864759cc5d829085b8635a8564a39 authored about 3 years ago

MAINT: fix type-narrowing addition in sparse.construct.bmat (#14626)

Closes gh-14623

869d975b7c188615b1a530bef0f27e8904aa6a13 authored about 3 years ago

TST: improve hess finite-diff tests

9ba2174af19d579e2b78adf68cfe95768210a5a8 authored about 3 years ago

LINT

f1e08ae85dc75d605a0614cae081542f13d7b64c authored about 3 years ago

Lint

af1565ce8549b2c643cd76a6fcffae4cd5de5c50 authored about 3 years ago

Merge pull request #15010 from rgommers/remove-g77-test

TST: remove fragile test which checks if g77 is linked

cd7c71bc68f6c5d6862f3b386db719057460d1a7 authored about 3 years ago

TST: remove incorrect hess test

94363fee458920e453902fdc22be11f6ac30d923 authored about 3 years ago

DOC: improve docstring for hess

446001ca7ce204400b240e87dcb0b14ee8358d70 authored about 3 years ago

MAINT: Newton-cg accepts FD_METHODS

7d42eedaa2aa8fff286abe553fa27ee9c706bcff authored about 3 years ago

MAINT: rename moduleTNC + review changes

88066d86147b3a8e6d572fb49c764de0ac976684 authored about 3 years ago

Merge pull request #11263 from andyfaff/gh11258

MAINT:optimize: Comply with user-specified rel_step

e84c19246d9399c018dc806446a794044c4539dc authored about 3 years ago

MAINT: _tnc_module.pyx use np.float64

26288af0c4aef494376b952cef023aef654e601f authored about 3 years ago

Merge pull request #15018 from larsoner/circle

CI: Work around Sphinx bug

1c50cde94561b5739400fc21cde4126f086f6bee authored about 3 years ago

CI: Work around Sphinx bug [skip azp] [skip actions]

d6dda81ddbbd87724ca5aec279b35219d66c712b authored about 3 years ago

Merge pull request #14755 from Patol75/Empty_ts_Solve_IVP

BUG: Avoid `solve_ivp` failure when `ts` is empty

4a393c38ca1f139a16ea0429a6caa81cccebca04 authored about 3 years ago

DOC: Fix Documentation rendering --refguide-check (#15014)

* STY: Fix Documentation rendering refguide-check
* DOC: fix missing spacing

Co-authored-by:...

6553bb4a9ba45a0544ce369b5fb7bbcd88b1dcdb authored about 3 years ago

FIX: raise Python OverflowError exception on Boost.Math error (#14833)

2ef3106ccf2d6145475897fde6282fbf1fa3c9ea authored about 3 years ago

Merge pull request #14729 from BSGalvan/fix-14390

DOC: fix documentation for scipy.optimize.brenth

d0e42b55017335ebc8068d05cdcdc6781c65df70 authored about 3 years ago

DOC: fixes to optimize.brenth docstring

Move See Also section to the correct place, and fix the DOI
link by using the `:doi:` directive.

16621ecb36ad74a5dde474cd2ff9a4ba273311a7 authored about 3 years ago

DOC: fix documentation for scipy.optimize.brenth

See #14390. This commit adds a proper reference for the brenth method,
along with the necessary ...

a13976af53bf040fb8f781c521cd0c462b52e298 authored about 3 years ago

Merge pull request #14852 from stephenbeckr/patch-1

DOC: Fix documentation bugs in `lstsq`

b2a887bb4d6a9b3d1c916e4060abc673c3a4f587 authored about 3 years ago

MAINT: py3.10 in more jobs and bump some 3.8 to 3.9 (#14832)

3b6383354b06e9b99b8fb984caa95cbca20ce369 authored about 3 years ago

Fix documentation bugs in `lstsq`

Documentation was incorrectly copied from numpy.linalg?

Suggested changes:
1. References `rcond...

781e420877ae46ce44e7e20f0486ba8ad86d014b authored about 3 years ago

Merge pull request #14845 from zhaofeng-shu33/patch-2

DOC: update a type specifier in a docstring in `radau.py`

259b4f6fcf788a872eb55c60efb4807606fb1556 authored about 3 years ago

Merge pull request #15008 from rgommers/depr-namespaces

MAINT: restore access to deprecated private namespaces

e45803b5cc536676de9c901a98dbc9cab1b1ed43 authored about 3 years ago

MAINT: _tnc_module.pyx remove redundant import

f7108cdd76908170d9887f1a7e5960780bce728d authored about 3 years ago

PEP8

0ba95e3dd0de5dbbfb5e749cb5c120410351af2a authored about 3 years ago

ENH: move tnc to cython

1be278a849fd417800bd728f1df6e259ae967fc6 authored about 3 years ago

MAINT: gh11258 respect rel_step

833b1b2101c701669468a75adab0ebe7067eaeca authored about 3 years ago

MAINT: automated step selection

3b0cf8649e9414556dd44f11e37acb6e9f2cffcd authored about 3 years ago

Merge pull request #15011 from MalikIdreesHasanKhan/master

Fixed typos.

e5c3b0761eeac0de1e716205443662f5a640a4c7 authored about 3 years ago

Merge pull request #14876 from AtsushiSakai/issue5511

DOC: optimize: Improved the solver docs of `optimize.minimize_scalar`

ed5203b0fb75a00cb361ecf71c1f2b60baea5e12 authored about 3 years ago

Fixed typos.

6ef34ea90e48976ad7c4b16dba153615395db377 authored about 3 years ago