github.com/scipy/scipy commits | Ecosyste.ms: OpenCollective

BUG: stats._unuran: fix invalid attribute lookups

73c8e9d7846ed179066586eb81edd212c6d720b6 authored about 3 years ago by Tirth Patel <[email protected]>

MAINT: interpolate: csr_matrix -> csr_array

166280e9c31065b92517dd804015cc89acbd9cfb authored about 3 years ago by Evgeni Burovski <[email protected]>

CI: fix test mode for Windows py39 job on Azure (full -> fast)

0a2f7eec989ef0e290ec8abb261994c518bb5d44 authored about 3 years ago by Ralf Gommers <[email protected]>

DOC: interpolate: silence `sproot` tutorial failure on refguide_asv_check (#15326)

[skip azp]
[skip actions]

70ca216d083e9b4195f085cabcee4de6320b5a6a authored about 3 years ago by Matt Haberland <[email protected]>

Merge branch 'bounds_improvements' of github.com:mdhaber/scipy into bounds_improvements

144f094cce76408f801e4a496a0aaf61ff4534c0 authored about 3 years ago by Matt Haberland <[email protected]>

Merge remote-tracking branch 'upstream/master' into bounds_improvements

6f3d8499184a2d19b080def8845468afda509465 authored about 3 years ago by Matt Haberland <[email protected]>

Apply suggestions from code review

7a7c209948521dc26cc923dee21fcf66b952622e authored about 3 years ago by Matt Haberland <[email protected]>

DOC: remove erroneous basin_hopping example from tutorial

1dd843d4d68935aa5e5110f74e21c2121781e6d2 authored about 3 years ago by Matt Haberland <[email protected]>

Undo all unnecessary changes to tutorial to avoid sphinx explosion

dd9cfb0506f7cc544c639dbde8e5ea8cda853944 authored about 3 years ago by Matt Haberland <[email protected]>

DOC: optimize: correct basinhopping tutorial example

d6b223675bbda45f12ed34529900febe9c6cd349 authored about 3 years ago by Matt Haberland <[email protected]>

Merge pull request #15312 from WarrenWeckesser/improve-pseudohuber

BUG: special: Fix loss of precision in pseudo_huber when r/delta is small.

5f8a1c74517675647caf14413727087ff30865b8 authored about 3 years ago by Tyler Reddy <[email protected]>

Merge pull request #15315 from jarrodmillman/numpy-main

MAINT: account for NumPy master -> main renaming

a7d6ac93b905d13364ff35724502904ec197a795 authored about 3 years ago by Tyler Reddy <[email protected]>

BUG: stats: handle infinite `df` in `t` distribution (#14781)

* BUG: stats: handle `df=np.inf` in t distribution

`t` distribution returned garbage values w...

cf71f7e3749edbdc1c2efbc37f9c1aaaf0a2f3fa authored about 3 years ago by Tirth Patel <[email protected]>

CI: reshuffle two Windows Azure CI jobs, and don't run 'full' on both

The Python 3.10 test was timing out a lot, and there's no reason to run
the full test suite on a...

447739ea3a2776ab87044b9ef157e41421353cc9 authored about 3 years ago by Ralf Gommers <[email protected]>

MAINT: improve test which checks usage of filterwarnings/simplefilter

79d53e80f248222c6f6282f55405f84a69e2f19f authored about 3 years ago by Ralf Gommers <[email protected]>

MAINT: filter RuntimeWarnings in stats functions

Fixes test suite failures on macOS 12, arm64.

See gh-14901 for details. The failures on x86-64 ...

19c860fe73cacb0e9e121486870b78660a89c9ae authored about 3 years ago by Ralf Gommers <[email protected]>

Merge pull request #15318 from Yikun/patch-2

BLD: update pyproject.toml to not pin numpy for aarch64 + PyPy

c98fc3f6ff90015873e11f326d92740896184e48 authored about 3 years ago by Ralf Gommers <[email protected]>

TST: update `sparse.linalg` tests for failures due to tolerances (#15301)

* TST: bump test tolerance for propack float32/complex64 test

This test is new, and is showin...

04a2be26e0135b64c9ccd5e799497917cc53698f authored about 3 years ago by Ralf Gommers <[email protected]>

Sync platform_python_implementation (master)

bb41ee5786cf66e91f58712fd9d401c4ca47a033 authored about 3 years ago by Yikun Jiang <[email protected]>

NumPy master renamed main

5ce5f0991d203a01873b8d1d83a9134324bea383 authored about 3 years ago by Jarrod Millman <[email protected]>

BUG: special: Fix loss of precision in pseudo_huber when r/delta is small.

8588c76f00e4c04100eec67171a5c9855158787d authored about 3 years ago by warren <[email protected]>

Merge pull request #15309 from mckib2/update-openblas-0.3.18

CI: update OpenBLAS to 0.3.18 in Azure jobs

544b938e06eba166b7e5bcc6298d9b3314f6cc33 authored about 3 years ago by Ralf Gommers <[email protected]>

Merge pull request #15285 from tylerjereddy/treddy_azure_32linux_runtests_simplify

CI: simplify 32-bit Linux testing

db9afcae4c1bbab64d4e8df84c891c4981a8fde9 authored about 3 years ago by Ralf Gommers <[email protected]>

BLD: update OpenBLAS to 0.3.18

33cd99bfb6d010ca8eeff120417303705354ec44 authored about 3 years ago by Nicholas McKibben <[email protected]>

BUG: special: Fix owens_t function for a = infinity (#15272)

Closes gh-15117.

3fb6ba11edb9c16ee110e5785e1fa4ada9ba0bd2 authored about 3 years ago by Namami Shanker <[email protected]>

Merge pull request #15305 from rgommers/update-deps

BLD: update NumPy to >=1.18.5, setuptools to <60.0

b202f561f84ff735b6a7a83b1ed54e22b3aad5e8 authored about 3 years ago by Tyler Reddy <[email protected]>

Document inaccuracies due to approximation in `_cdf_cvm` (#14446)

* Document inaccuracies due to approximation in `_cdf_cvm`

b81338026439c389d25d49c2ada05952a26edb1d authored about 3 years ago by Carsten Allefeld <[email protected]>

Revert "BLD Respect the --skip-build flag in setup.py" (#15306)

84658e69c2b5f8767c56eaed5151b66a4c0b1e55 authored about 3 years ago by Ralf Gommers <[email protected]>

Merge pull request #14847 from rgommers/meson-build

ENH: BLD: enable building SciPy with Meson

c762455f078d3d454cbc7f8b50febb44808d5ba1 authored about 3 years ago by Ralf Gommers <[email protected]>

BLD: update NumPy to >=1.18.5, setuptools to <60.0

For NumPy, this is a regular bump after 1.8.x was branched (still
slightly on the conservative s...

2e28fb64d67b8a288e01d11741fa2cd34f741d3d authored about 3 years ago by Ralf Gommers <[email protected]>

BLD: meson: update build config for `optimize._highs` changes

Co-authored-by: Nicholas McKibben <[email protected]>

40c3f672750641638306a1e3c2cd290a091a6c8d authored about 3 years ago by Ralf Gommers <[email protected]>

DOC: extend Meson build documentation

b22f0c796a148c9ba67da9618943912672c67a91 authored about 3 years ago by Ralf Gommers <[email protected]>

BLD: updates to meson.build files for recent changes in SciPy master

Co-authored-by: Smit-create <[email protected]>

c941cf2ea6e96936252576ac4532909674f236b4 authored about 3 years ago by Ralf Gommers <[email protected]>

DEV: meson: add a tool to check that all Python test files got installed

e609d7dbe6ac3da198b2b35c37eefd099662f0a4 authored about 3 years ago by Smit-create <[email protected]>

BLD: add script to process f2py `.src` template files

ea581bb1048fb2d42bfc747e939035378b05f8b0 authored about 3 years ago by Ralf Gommers <[email protected]>

CI: meson: add a Linux Meson build which uses `-Werror`

Co-authored-by: Harsh Mishra <[email protected]>

23219d72ad581799e5276e4500748a10d1233709 authored about 3 years ago by Ralf Gommers <[email protected]>

DOC: meson: add documentation on using Meson to the contributor guide

ccd8ec6b2c951be49cf0db135bc74aadb374a4fa authored about 3 years ago by Ralf Gommers <[email protected]>

DEV: meson: add a conda environment file for Meson

Note: this works on Linux and macOS, and probably on other
common Unix-like systems. But not on ...

4204dbb1229076936a31650452d7043f3e87aa27 authored about 3 years ago by Ralf Gommers <[email protected]>

MAINT: add files to `.gitignore`

506b557ce04884e34f785165cef0c2f8804e7685 authored about 3 years ago by Ralf Gommers <[email protected]>

DOC: add documentation on how to run a CI job locally with Act

aec36cbe4b55140fdcb60fc4f9b0f6189e7cec21 authored about 3 years ago by Harsh Mishra <[email protected]>

DEV: meson: add a dev.py script (similar to runtests.py)

Adding all co-authors here who contributed to some Meson build
improvements on my (Ralf's) fork....

8704c0025539bd97473da8b84c8f0735c31ff6e2 authored about 3 years ago by Ralf Gommers <[email protected]>

BLD: Windows support in Meson build

1315fe0b6453fbc7ceb4bda6595a5497d426d9ea authored about 3 years ago by Matthew Brett <[email protected]>

BLD: meson: make version string and `__config__` generation work

c32c8238c98547b6b25dd917dd384fbc60b93aac authored about 3 years ago by Harsh Mishra <[email protected]>

BLD: meson: add main meson.build files and `_lib` and `_build_utils`

e20a5770d182a84ee20af099a29f4ac0d768ba80 authored about 3 years ago by Ralf Gommers <[email protected]>

BLD: meson: add support for `optimize`

202e36b7ad93d12165fa38720037afd949f22296 authored about 3 years ago by Gagandeep Singh <[email protected]>

BLD: meson: add support for `spatial`

1706cee6bf62049314b52abc0d43266df8560050 authored about 3 years ago by Gagandeep Singh <[email protected]>

BLD: meson: add support for `stats`

b7d00e54f35016338f9ff8363c29796f946f0665 authored about 3 years ago by Gagandeep Singh <[email protected]>

BLD: meson: add support for `fftpack`

35eb64646e15fab73215ce5225842b92cdd9e58a authored about 3 years ago by Ralf Gommers <[email protected]>

BLD: meson: add support for `sparse.linalg`

Co-authored-by: Smit-create <[email protected]>
Co-authored-by: Ralf Gommers <ral...

38a17fdd3276f4a71bd4368d973e049d939a0df4 authored about 3 years ago by Gagandeep Singh <[email protected]>

BLD: meson: add support for `misc`

a241670a92a97023a6de3f6b0e511adb65c54ec3 authored about 3 years ago by Smit-create <[email protected]>

BLD: meson: add support for `signal`

54b45c38c09605c72c1622e3f11aaad028647d8e authored about 3 years ago by Smit-create <[email protected]>

BLD: meson: add support for `io`

7c585d7209e902f6e69f1b97df536406cfaf9fa7 authored about 3 years ago by Gagandeep Singh <[email protected]>

DEV: add ninjatracing.py script for profiling build performance

801034422d67ec2e5fc504277ce61b8984a51657 authored about 3 years ago by Ralf Gommers <[email protected]>

BLD: meson: add support for `special`

d7da18962ea09a405036faf7f00d2cc0ef25dc46 authored about 3 years ago by Ralf Gommers <[email protected]>

BLD: meson: add support for `odr`

a215b70ca51427d5dfd07ce80b0a4b9514a7f014 authored about 3 years ago by Ralf Gommers <[email protected]>

BLD: meson: add support for `ndimage`

a9b127059123c333ca4ff4d023acfbed6012fd04 authored about 3 years ago by Ralf Gommers <[email protected]>

BLD: meson: add support for `integrate`

1ce1e0bdefd8e8b24083945afadb7eafdbec8591 authored about 3 years ago by Gagandeep Singh <[email protected]>

BLD: meson: add support for `linalg`

707647a162f0731b0fd2b7932afb1832c5a57c85 authored about 3 years ago by Ralf Gommers <[email protected]>

BLD: meson: add support for `constants`

d90d67e6c2cff94c3132ffafc9d31117cef4e79c authored about 3 years ago by Ralf Gommers <[email protected]>

BLD: meson: add support for `cluster`

3cf395e23ec6f6f4739850b7328857cbfe0013f1 authored about 3 years ago by Ralf Gommers <[email protected]>

BLD: meson: add support for `sparse` and `sparse.csgraph`

1d21781a1890b5bf7c8d754c3bdde37cd180c9fb authored about 3 years ago by Ralf Gommers <[email protected]>

BLD: meson: add support for `interpolate`

58e80dda9fadbf3f72c92c136e3d0213aad0b3e4 authored about 3 years ago by Ralf Gommers <[email protected]>

BLD: meson: add support for `fft`

ee391d4993308de82ad82a5fc1b5995193a29816 authored about 3 years ago by Ralf Gommers <[email protected]>

Merge pull request #15304 from rgommers/fix-gitpod-build

CI: fix Gitpod build by adding HiGHS submodule checkout

5d0c1b8c55cb16c25060772966c0d179beea3ccf authored about 3 years ago by Ralf Gommers <[email protected]>

CI: fix Gitpod build by adding HiGHS submodule checkout

d68e0eb29ebe0ed00c673aea05ab331ad3acebd0 authored about 3 years ago by Ralf Gommers <[email protected]>

MAINT: optimize: adjustments to `Bounds` per review comments

c9726ab05a02a69f9e403ff16331f0b1172f357e authored about 3 years ago by Matt Haberland <[email protected]>

Merge pull request #15293 from tylerjereddy/treddy_hausdorff_overflow_fix

a3821e0e2df99d11840f4f952f38168566978d9f authored about 3 years ago by Pamphile Roy <[email protected]>

DOC: More docstring reformatting. (#15302)

1dd4973d1987ee9f3ef4f2885507b88d072a8184 authored about 3 years ago by Matthias Bussonnier <[email protected]>

DOC: Misc manual docs updates. (#15300)

7eb08a734c442b03d48fcb90922bfed63053762a authored about 3 years ago by Matthias Bussonnier <[email protected]>

Merge pull request #15295 from Kai-Striega/bump_license

REL: Bump `LICENSE.txt` to 2022

18fd2a5e8d603c24d2f1878ca874bab681843f28 authored about 3 years ago by Ralf Gommers <[email protected]>

TST: optimize: Bounds: collect Bounds tests into TestBounds class

1c9c5dc29b9b602e91baccf1ffd8592303f41c87 authored about 3 years ago by Matt Haberland <[email protected]>

ENH: optimize: Bounds: add `residual` method

abd1acc0b2b65e1be1586bf583ac5d8eddd8bab8 authored about 3 years ago by Matt Haberland <[email protected]>

ENH: optimize: Bounds: add input validation

b1e848fc29e3e644850d1aa99c2dcf83151db48c authored about 3 years ago by Matt Haberland <[email protected]>

ENH: optimize: Bounds: add defaults for lb, ub

86f8ebdf892b5d8221561fc50b23809fc62ace28 authored about 3 years ago by Matt Haberland <[email protected]>

REL: Bump `LICENSE.txt` to 2022

40cf5799fa9844101054abd360dc64d7e8e875d6 authored about 3 years ago by Kai Striega <[email protected]>

BUG: fix Hausdorff int overflow

* add a fix and regression test for operating
on arrays that have sizes exceeding the 32-bit
sig...

15532ad9d986c96cec4f68c5350b425d29f81751 authored about 3 years ago by Tyler Reddy <[email protected]>

BUG: special: fix `stdtr` and `stdtrit` for infinite df (#15253)

* BUG: special: fix stdtr and stdtrit for infinite df

`stdtr` and `stdtrit` returned wrong re...

384db09fd2e60e1c75caacec85d16c7d4cedc2d9 authored about 3 years ago by Tirth Patel <[email protected]>

ENH: Make `stats.kappa4` work with array (#15250)

* ENH: Make `kappa4.stats` work with arrays

Co-authored-by: Matt Haberland <mhaberla@calpoly....

a11ff1ea8fff42f1d2d95f2cc77b408200865c14 authored about 3 years ago by Smit Lunagariya <[email protected]>

Merge pull request #15291 from Carreau/doc-fixes-II

DOC: some more docstring/numpydoc formatting.

435c7daa535b4d236e49ad40a754f4c31036bdb3 authored about 3 years ago by Ralf Gommers <[email protected]>

DOC: some more docstring/numpydoc formatting.

As usual, some casing consistency and space around colon.
I think one or two parameter renamed a...

bcaca92331e0fdfd8de24b4b42eda9ce27b5c8fb authored about 3 years ago by Matthias Bussonnier <[email protected]>

Merge pull request #15289 from Carreau/doc-format

0b74bc9f6bd687aa3da9088b319bd4e0bd905b72 authored about 3 years ago by Pamphile Roy <[email protected]>

DOC: Add thorough docstring for scipy.special.binom (#15279)

e9c855c75810a778ed908685c8942604500d9143 authored about 3 years ago by Albert Steppi <[email protected]>

DOC: Misc numpydoc formatting.

This updates a couple of files and docstrings to properly follow
numpydoc.

You'll find:

- spa...

e2bdcc510ed6c2fec0623ab65e50146ee07ad681 authored about 3 years ago by Matthias Bussonnier <[email protected]>

Merge pull request #15286 from scipy/highs-submodule-ci-issue

MAINT: Highs submodule CI issue - use shallow cloning

98d7455adf442ecdba02107a94fb67f97f4a740c authored about 3 years ago by Ralf Gommers <[email protected]>

Merge pull request #15288 from hoodmane/respect-skip-build

BLD Respect the --skip-build flag in setup.py

5a77f912527764c1d47cc5e34c0295d15cb0108f authored about 3 years ago by Ralf Gommers <[email protected]>

BLD Respect the --skip-build flag in setup.py

`setup.py install` is supposed to accept a `--skip-build` flag which skips building the
package ...

5b6c6b347547cd9adb6189e15e9a20d9e39ed58f authored about 3 years ago by Hood Chatham <[email protected]>

FIX: tabs instead of spaces...

d8055c3b7895ff04ba8276e1d4fae84f2f646690 authored about 3 years ago by Nicholas McKibben <[email protected]>

BLD: shallow history for highs submodule

c26e8b5a08f7d6e82ad61928b3fbcb703b90fd6c authored about 3 years ago by Nicholas McKibben <[email protected]>

Merge pull request #15284 from rgommers/place-poles-warning

TST: silence RuntimeWarning from `np.det` in `signal.place_poles` test

e19e4e99467a7849583526cb5ed10730fff4618a authored about 3 years ago by Tyler Reddy <[email protected]>

CI: simplify 32-bit Linux testing

* don't reinstall SciPy in the Azure 32-bit Linux
job after it has just been installed; use the ...

7a9cd4fcdad65efc4825a658214aeb33053f52de authored about 3 years ago by Tyler Reddy <[email protected]>

ENH: optimize: HiGHS submodule and update (#15217)

* ENH: optimize: HiGHS submodule and update

Co-authored-by: Matt Haberland <mhaberla@calpoly...

8ea1408155ee734845249dedf39aabd4d162fec3 authored about 3 years ago by Nicholas McKibben <[email protected]>

TST: silence RuntimeWarning from `np.det` in `signal.place_poles` test

This test was raising because of the emitted "divide by zero" warnings
on macOS 12.1 on arm64 ha...

e845c9b279ddd66e9d2779fc4af74e286a2d4b2f authored about 3 years ago by Ralf Gommers <[email protected]>

CI: fix Azure Windows and 32-bit Linux jobs (#15268)

* CI: pin setuptools to <60.0 for Windows and 32-bit Linux jobs on Azure

* pin pythran and se...

d04af33db55dc5adc30a61d3ae759442e3465b9d authored about 3 years ago by Ralf Gommers <[email protected]>

ENH: stats: add axis tuple support to _axis_nan_policy_factory decorators (#15257)

cadc4b60c5c441cec92a8191947f56793b04a333 authored about 3 years ago by Matt Haberland <[email protected]>

Merge pull request #15278 from rgommers/update-gitmodules

MAINT: remove non-default settings (except `shallow`) in `.gitmodules`

00758f96d8ff937b4447d646ae909ef31302aa59 authored about 3 years ago by Tyler Reddy <[email protected]>

MAINT: remove non-default settings (except `shallow`) in `.gitmodules`

Closes gh-15276

[ci skip]

d2686dd1e36d398e5090eedc15b36322315a6b1f authored about 3 years ago by Ralf Gommers <[email protected]>

DOC: stats: add reference for gstd (#15243)

f4d24e6ace83fc9853dac3ef6aef6f947630e0e2 authored about 3 years ago by Quentin Barthélemy <[email protected]>

Merge pull request #15265 from akahard2dj/DOC_scipy_mailmap

DOC: update .mailmap

c42a15989fe11438996072cee5ce9bcafb22d8bc authored about 3 years ago by Ralf Gommers <[email protected]>

DOC: update name from nickname to canonical name

[ci skip]

fd7f1b312f1a31b45cd083e98ff9ffba4d3de122 authored about 3 years ago by Dowon <[email protected]>

Merge pull request #15274 from bobcatCA/fix_DOC_15252

DOC: fix docstring in _cdf() function of _multivariate.py

fd36ebedb757a784a4fb04be8094e14e6fb5f4f3 authored about 3 years ago by Ralf Gommers <[email protected]>