github.com/scipy/scipy commits | Ecosyste.ms: OpenCollective

ENH: added x_unbounded output to lsq_linear

c562521e57f6964cebc9a4b4b589e099a98e8b87 authored almost 3 years ago by eytanadler <[email protected]>

Update docstring example based on doctest

66f023f41352c3123996aca0ced32220e64a2f88 authored almost 3 years ago by P. L. Lim <[email protected]>

BUG/DOC/TST: combine_pvalues: fix Tippett and Pearson (#15452)

Co-authored-by: Pamphile Roy <[email protected]>
Co-authored-by: Albert Steppi <albert.ste...

e8212863a7c09e047e78a9a8f983527ad01c69fc authored almost 3 years ago by Gerrit Ansmann <[email protected]>

Merge pull request #15580 from DWesl/avoid-c-preprocessor-symbol

e7f5741df74f116fa9d306dbb6ef85e4a53183cb authored almost 3 years ago by Pamphile Roy <[email protected]>

STY: Start pythran comments with a space after the pound sign.

4c5ef993abd05333711254c578ee3de56c7c7e32 authored almost 3 years ago by DWesl <[email protected]>

STY: Fix long lines and inter-function spacing.

Does not fix the block comments (flake8 doesn't like pythran export).

e324edd69e63370372013ed43ae26fdd9307c8d5 authored almost 3 years ago by DWesl <[email protected]>

MAINT: github template for user questions (#15577)

[ci skip]

266670d2674f39c06b934c0ba6ee4d0f76ebd9e9 authored almost 3 years ago by Pamphile Roy <[email protected]>

STY: Rename the other hypotest function with probable CPP conflicts.

_Aij and _Dij also have potential conflicts,
but those are less likely due to having three chara...

6298587d0c44a2176694588993a295bb3783dd5c authored almost 3 years ago by DWesl <[email protected]>

MAINT: clarify deprecation warning spatial.transform.rotation (#15581)

1cfbdbc33ab670eb882713d6220462250ca531c4 authored almost 3 years ago by Samuel Wallan <[email protected]>

DOC: special: fix `special.factorial2` docstring inconsistency with code (#15592)

6c4a1970e36a75556ea228a85b77bcea1188092a authored almost 3 years ago by Atsushi Sakai <[email protected]>

DOC: clarify O(N) SO(N) in random rotations (#15583)

b31c6b6183b1ad49e38afc70f6e07c30a27360fe authored almost 3 years ago by Amit Portnoy <[email protected]>

DOC: factorialk docstring inconsistent with code (#15590)

Co-authored-by: Pamphile Roy <[email protected]>

f428dd960d5b9c4f53d9d773ffdd349a218062f9 authored almost 3 years ago by Jake Bowhay <[email protected]>

MAINT: stats.fit: fix bug when user_bounds[param_name] is array

e0ab29d2da6b428c2a359ee80b94ce92bc2e277a authored almost 3 years ago by Matt Haberland <[email protected]>

MAINT: stats.fit: add error for unsupported distributions

844b6c03bb81dde756731dab0d41330e11a742a2 authored almost 3 years ago by Matt Haberland <[email protected]>

MAINT: stats.monte_carlo_test: use new style rng in tests

2ab1099ab64792f05a471b6a448b915ebefffbbd authored almost 3 years ago by Matt Haberland <[email protected]>

BUG: Avoid C Preprocessor symbol in _hypotests_pythran.py.

_P is a C Preprocessor symbol on my platform, so compilation of this file
fails with many errors...

287c8854bca7368c29ab62a2e17e94ad91def2d5 authored almost 3 years ago by DWesl <[email protected]>

Merge pull request #15578 from matthew-brett/simplify-windows-ci

Make Windows Python setup more standard

ff1d1555fc67589bf94c272a09ca519ae895d63a authored almost 3 years ago by Tyler Reddy <[email protected]>

Make Windows Python setup more standard

4fb126a4709303fe1853c3907b93ed667ef011ec authored almost 3 years ago by Matthew Brett <[email protected]>

Merge pull request #15563 from rgommers/ci-meson-windows

CI: add a Windows CI job on GitHub Actions using Meson

31ed6bce82e6486f31fb10a647fdd27d3008a8cb authored almost 3 years ago by Tyler Reddy <[email protected]>

Merge pull request #15571 from Carreau/wrong-underline

DOC: Wrong underline length

3a4c89498a53f05e3921f5ab03a96355d7f54849 authored almost 3 years ago by Evgeni Burovski <[email protected]>

MAINT: bump test tolerance in test_linprog (#15570)

b806a310d09e9bad4087eef158861e84c04d196b authored almost 3 years ago by Evgeni Burovski <[email protected]>

DOC: Wrong underline len

[skip azp] [skip actions] [skip ci]

f0d41226551d23e5e70eefbd07aae2d4d2f80f58 authored almost 3 years ago by Matthias Bussonnier <[email protected]>

DOC: pip quickstart: setup.py -> meson (#15569)

Recommend meson/dev.py in pip quickstart instead of setup.py

Use OpenBLAS not ATLAS

[ci sk...

cae7b5cb42cbb85d6692ab059c173beea893d4b5 authored almost 3 years ago by Evgeni Burovski <[email protected]>

MAINT: sparse.linalg: fix svds error message

4162ff194b79cc83fe8f747a720073051bfa9c6e authored almost 3 years ago by Dimitri Papadopoulos Orfanos <[email protected]>

Merge pull request #15524 from melissawm/doc-install

DOC: Remove redundant installation instructions

e98bdfd4499c964e9950ede234d71452983a0dab authored almost 3 years ago by Ralf Gommers <[email protected]>

BENCH: selection of linalg solvers to facilitate expansion (#15559)

8dc1205a8b903705e0f9fd04bb138455db5be6a7 authored almost 3 years ago by Gang Zhao <[email protected]>

DOC: optimize.milp: add whitespace in docstring so examples render correctly

[skip azp] [skip actions]

60e43f49fc01cb5e87e342ec2689d592367b45a1 authored almost 3 years ago by Matt Haberland <[email protected]>

Merge pull request #15565 from Carreau/underline-len

DOC: incorrect underline lenght in section.

29ce14562b6bb8a482fb4cf471cdd07f4dff0dcd authored almost 3 years ago by Tyler Reddy <[email protected]>

Merge pull request #15553 from Smit-create/meson_option1

ENH, BLD: Add configure option for blas/lapack libraries

278fcfb9700fe2e9f466fa9a1cd2c76b34feb395 authored almost 3 years ago by Ralf Gommers <[email protected]>

DOC: incorrect underline lenght in section.

NumpyDoc emits a warning which clutter output.

[skip azp] [skip actions]

6d03abb09d3fa675c69efcc017e09feabdfe12c8 authored almost 3 years ago by Matthias Bussonnier <[email protected]>

CI: add a Windows CI job on GitHub Actions using Meson

[skip azp]

Co-authored-by: Matthew Brett <[email protected]>

2ab7dca5c6af286f9faddfda7325f0c237f14761 authored almost 3 years ago by Ralf Gommers <[email protected]>

BLD: fix and document BLAS/LAPACK dependencies in meson.build files

[skip azp]

67704de58052e29f57ed489acedad4e00254c3d5 authored almost 3 years ago by Ralf Gommers <[email protected]>

ENH, BLD: Add configure option for blas/lapack libraries

This is done via the standard `meson_options.txt` file. To use,
do for example:
```
meson setup ...

f8debbbfa7baae80d326a0b98e43ce7d7651fa95 authored almost 3 years ago by Smit-create <[email protected]>

DOC: types and return values for Bessel Functions (#15560)

Co-authored-by: Pamphile Roy <[email protected]>

fe1774345cc749d067b040ef7c1844b54d5f2c8f authored almost 3 years ago by avishai231 <[email protected]>

DOC: stray backticks (#15564)

500ef810774a92df9adf7fafbeab7f250542ecf7 authored almost 3 years ago by Matthias Bussonnier <[email protected]>

Merge pull request #15512 from mdhaber/highs_default

d119ea41ce5355b8f0f27a1d15fd371e61bc1a52 authored almost 3 years ago by Pamphile Roy <[email protected]>

Merge pull request #15561 from rgommers/update-highs

MAINT: update HiGHS submodule to include fix for Windows segfault

6c72612d18fb4b567f1f42453db745ae9281f58d authored almost 3 years ago by Ralf Gommers <[email protected]>

MAINT: update HiGHS submodule to include fix for Windows segfault

Closes gh-15456

3eb74956fdfee1dc6c8cf2062d32fb16d6a747c4 authored almost 3 years ago by Ralf Gommers <[email protected]>

Merge pull request #15555 from ev-br/shallow_unuran

MAINT: make unuran clone shallow

13b02c7410d63e98113767636f03f979996a2546 authored almost 3 years ago by Tyler Reddy <[email protected]>

Merge pull request #15558 from rgommers/ci-azure-reenable-pythran

CI: re-enable Pythran in Azure Windows CI jobs

548ef7eeb4bb406dba7d08ea96fdd37c721ea320 authored almost 3 years ago by Tyler Reddy <[email protected]>

MAINT: stats: make meaning of result `success` consistent with `linprog`

ee94468f336f1ba6adebed1954674c631da69ed3 authored almost 3 years ago by Matt Haberland <[email protected]>

CI: re-enable Pythran in Azure Windows CI jobs

Building with Pythran should be fixed in gh-15531

[skip github]

469039cc3a1f29bf452106d5de56b0099135be08 authored almost 3 years ago by Ralf Gommers <[email protected]>

Merge pull request #15531 from isuruf/pep440

BUG: fix importing `scipy.lib._pep440`

This fixes the issue on Windows where Pythran didn't w...

6d701fc82bcb3b2f2db3b47b30a9d3fe1901cdf4 authored almost 3 years ago by Ralf Gommers <[email protected]>

Merge pull request #15557 from j-bowhay/bisplev_docs

DOC: fix an inaccuracy in bisplev documentation

ce7d434a70fab878af440622c9050157078bf6f5 authored almost 3 years ago by Evgeni Burovski <[email protected]>

DOC: fixes inaccuracy in bisplev documentation

820d3042c867184f65d21df61f6d76f41b69997b authored almost 3 years ago by Jake Bowhay <[email protected]>

MAINT: make unuran clone shallow

[ci skip]

ceaae2ad1ac6f3114465883844117286251e90a5 authored almost 3 years ago by Evgeni Burovski <[email protected]>

Merge pull request #15516 from mdhaber/mode_nans_objects

MAINT: stats.mode: fix issues with `nan_policy='propagate'`

fa6b307ba4b46a0a7e5f956831a68223cc7a5a39 authored almost 3 years ago by Tirth Patel <[email protected]>

Merge pull request #15546 from tupui/spatial_section

DOC: missing section for metrics

63472fd76eadf2c97b9aaf6f55ffc6ddce4b39b6 authored almost 3 years ago by Matt Haberland <[email protected]>

Merge pull request #15470 from tupui/qmc_tweaks

ENH: `stats.qmc`: faster hypercube point comparison and scrambling doc

25e8e96a45dfd9609e7b914c1ea8376805f2561b authored almost 3 years ago by Matt Haberland <[email protected]>

Apply suggestions from code review

[skip azp] [skip actions]

Co-authored-by: Pamphile Roy <[email protected]>

76b148318d546f1329b72fc0bf63e7984af6a31f authored almost 3 years ago by Matt Haberland <[email protected]>

ENH: simplify if condition and remove not

Co-authored-by: Matt Haberland <[email protected]>

dea01cb8bcda8ae43ebf98dab1c844ab9d62e5e0 authored almost 3 years ago by Pamphile Roy <[email protected]>

DOC: missing section for metrics [skip azp] [skip actions]

68dfe80806c40b149872b7ea2f59e0952fbf0249 authored almost 3 years ago by Pamphile Roy <[email protected]>

Merge pull request #15215 from mdhaber/permutation_t_batch2

b9881c85530f42c19c97ed38c052af8100caf250 authored almost 3 years ago by Pamphile Roy <[email protected]>

TST: parametrize test_ldl_type_size_combinations (#15532)

TST:linalg: parametrize test_ldl_type_size_combinations

727bf59f76b8a1c06a427b7035e99e1ad3f751df authored almost 3 years ago by h-vetinari <[email protected]>

Merge pull request #15529 from tylerjereddy/treddy_forward_180_relnotes

882821e7c919f352b0488412289681bfb5fb1da5 authored almost 3 years ago by Pamphile Roy <[email protected]>

Merge pull request #15523 from AvivYaish/patch-1

DOC: fixed the link for fluiddyn's transonic vision in dev/roadmap.html.

6c2f5744af0f142d9d46946c973b99ced73cf9da authored almost 3 years ago by Ilhan Polat <[email protected]>

TST: stats.mode: skip numerical array nan test for old NumPy

453f9c33f1464f11f1a765edcc807e0c9afcb2e9 authored almost 3 years ago by Matt Haberland <[email protected]>

[BUG] Fix importing scipy.lib._pep440

- Change scipy/_lib/_pep440 to scipy._lib._pep440
- Do the second import in else clause to avoid...

2dc3d63d36ddc44eb4b7b7cc3463f385e07805d0 authored almost 3 years ago by Isuru Fernando <[email protected]>

DOC: forward port 1.8.0 relnotes

* forward port the SciPy `1.8.0` release notes
following the final release

ef9ff23f0804cf3d056e2f764e48e8fdb91ca9eb authored almost 3 years ago by Tyler Reddy <[email protected]>

ENH: stats.fit: add parameter for initial guess

253856e2049a7fa20addbda8b62f3aeb80340a49 authored almost 3 years ago by Matt Haberland <[email protected]>

DOC: stats.fit: update documentation after interface simplification

c65804f8fc495b461b09c9f8a790754330e9c556 authored almost 3 years ago by Matt Haberland <[email protected]>

MAINT: stats.fit: make ShapeInfo -> _ShapeInfo

b54f8fc111be17e969aefa2af5a04babf7622b63 authored almost 3 years ago by Matt Haberland <[email protected]>

ENH: stats.fit: simplify interface

e56a9490554e96b63a48d69bdce4df47a01b232b authored almost 3 years ago by Matt Haberland <[email protected]>

DOC: remove redundant installation instructions

b5c3bc6822c8a8e501030b62cce0697974342190 authored almost 3 years ago by melissawm <[email protected]>

Fixed the link for fluiddyn's transonic vision.

3134ab622b09d5d9bfd34c7aabbf8b92a8497723 authored almost 3 years ago by Aviv <[email protected]>

Apply suggestions from code review

[skip ci]

f3f5d9a8ad9e47fc783854f39a597dac3b8cb4a9 authored almost 3 years ago by Matt Haberland <[email protected]>

Merge pull request #15515 from scipy/readme_links

MAINT: fix broken link and remove CI badges

cdb9b034d46c7ba0cacf65a9b2848c5d49c286c4 authored almost 3 years ago by Tyler Reddy <[email protected]>

Merge pull request #15520 from mdhaber/gh15504_followup

TST: optimize.minimize: add tests for np.all(lb == ub)

8229ebb1d36c5ccdfafec3e976e844a9db4fcf23 authored almost 3 years ago by Andrew Nelson <[email protected]>

TST: stats.fit: xfail no longer appropriate after gh-15433 is fixed

[skip ci]

d4644f603361ebba22a89f52c5c9189c6780cd7c authored almost 3 years ago by Matt Haberland <[email protected]>

Merge remote-tracking branch 'upstream/main' into fit_distributions

92f3cd6890f0fa789df3489e3ae3c288e18eac5c authored almost 3 years ago by Matt Haberland <[email protected]>

TST: optimize.minimize: add tests for np.all(lb == ub)

869f6d7a83292b4cc9498acd05d017049ec00fc0 authored almost 3 years ago by Matt Haberland <[email protected]>

MAINT: optimize.minimize: fix error when np.all(lb == ub) (#15504)

088dfeba5676dde77eeef88bc1056c8786913279 authored almost 3 years ago by Andrew Nelson <[email protected]>

MAINT: stats: see if np.unique works the same way on different platforms

40ea60cf5e207e6511f4e85846bdcccc3c7185ac authored almost 3 years ago by Matt Haberland <[email protected]>

MAINT: fix broken link and remove CI badges

[skip azp] [skip actions]

df19e4585812eb4b4d5706b605cbc15b816bd1a5 authored almost 3 years ago by Pamphile Roy <[email protected]>

MAINT: stats.mode: fix issues with nan_policy='propagate'

a4423730d94a508a2a5a0d3265c34276e7aa0762 authored almost 3 years ago by Matt Haberland <[email protected]>

DEV: meson: allow specifying build directory and install prefix (#15502)

- default "install-prefix" to `<build-dir>-install` so installs are not overwritten
- reconfigu...

7deaf3e33eacbd40924504b1e11e12bc59a2e778 authored almost 3 years ago by Tirth Patel <[email protected]>

MAINT: stats: mode: mode is a reduction operation; should consume an axis (#15423)

* MAINT: stats: mode: mode is a reduction operation; should consume a dimension

725a4eb736915109ea2a808dd619f227930758c3 authored almost 3 years ago by Matt Haberland <[email protected]>

Merge pull request #13490 from mdhaber/check_dist_params

DEV: stats: check for distribution/method keyword name collisions

a57451972d537b8e18a2f3badb482b7dc52ac4ef authored almost 3 years ago by Evgeni Burovski <[email protected]>

Merge pull request #15494 from kianmeng/fix-typos-in-doc

DOC: fix typos in doc

cf1d01c3ae602bd7acc19429d69949fc9b6352d3 authored almost 3 years ago by Andrew Nelson <[email protected]>

Merge pull request #15026 from andyfaff/approx_fprime

5a5769b8e8d967192f7ea9084478c15205f5d6f5 authored almost 3 years ago by Pamphile Roy <[email protected]>

DOC: adjust version changed flag

90ab2039e1c17c34ce4f1068b84dea8a57ea9f91 authored almost 3 years ago by Pamphile Roy <[email protected]>

MAINT: optimize.linprog: make HiGHS default and deprecate old methods

5495f4302058903f4f2ee15737373585fc5e311d authored almost 3 years ago by Matt Haberland <[email protected]>

Fix typos in doc

82451af290fb2a13bb5e0ad46b8119ab6f1d0292 authored almost 3 years ago by Kian-Meng Ang <[email protected]>

Update analytics URL (#15505)

a0535bee9d4da58e6d41e963e907c1b9f7684585 authored almost 3 years ago by Stefan van der Walt <[email protected]>

DOC: signal: fixed parameter 'order' for butter bandpass (#15496)

Co-authored-by: Pamphile Roy <[email protected]>

cd51c03d7ab029baf21939579d69bac4d8d380ae authored almost 3 years ago by Jake <[email protected]>

Merge pull request #15501 from Smit-create/fix_warn2

MAINT: Remove unused variable warnings

82ee5b4887c5222859c30d9121c0274034119485 authored almost 3 years ago by Warren Weckesser <[email protected]>

MAINT: Remove unused variable

1cd18e5dcffd9f7e2d84fde1321410aa79bc73db authored almost 3 years ago by Smit-create <[email protected]>

CI: remove matplotlib from 32-bit linux job, it fails to build (#15499)

812613625dba7e6f0a195b03c88ace7d59fd83a4 authored almost 3 years ago by Ralf Gommers <[email protected]>

Merge pull request #15439 from andyfaff/vectorise

923853dd0db57d733367a327cdfd05e61850243d authored almost 3 years ago by Pamphile Roy <[email protected]>

Merge pull request #15497 from rgommers/update-uarray

9f8f0f989a92931723389396ec02827d2bff18f4 authored almost 3 years ago by Pamphile Roy <[email protected]>

MAINT: update vendored uarray

ba12a996883c7dc29baaa1d12dec6d8eb19fb76e authored almost 3 years ago by Ralf Gommers <[email protected]>

Merge pull request #15462 from rgommers/ci-macos-meson

CI: switch one macOS CI job from distutils to meson

d7283ff75c218c300f372b5fdd960b987c1709a1 authored almost 3 years ago by Andrew Nelson <[email protected]>

DOC: example

8a601321b27bf3730b5a4ce82611731f120d1bc8 authored almost 3 years ago by Andrew Nelson <[email protected]>

DOC: explain when to use vectorized/workers

59e1cede8bf959608e9757108244094f4b1a136e authored almost 3 years ago by Andrew Nelson <[email protected]>

BUG: fix typo

bee35d4d063a86005a5b9cf094ec95dc5371ec58 authored almost 3 years ago by Andrew Nelson <[email protected]>

TST: assert_almost_equal-->assert_allclose

f830e619dc8ba9b125826c8b2df2ef167aacd061 authored almost 3 years ago by Andrew Nelson <[email protected]>

BUG: vectorized has lower nfev

7bf28c50efa63cb2197d3b21febbb2c85926a8e5 authored almost 3 years ago by Andrew Nelson <[email protected]>

Make bounds test for shgo stronger (#15484)

* Move bounds away from optimum to force bounds to be active

65d8361519e3f1166d81dceef9f1d6375b4ed808 authored almost 3 years ago by Daniel Schmitz <[email protected]>

Merge pull request #15485 from rgommers/meson-updates

BLD: updates to Meson build files for more correct linking and removing warnings

46f2e9c3194eba83fb5f391081bd526ff6c0d7aa authored almost 3 years ago by Tyler Reddy <[email protected]>

CI: add `MACOSX_DEPLOYMENT_TARGET=10.9` to the macOS Meson job

51563d086019f22a4ba726be3d21fba81f642905 authored almost 3 years ago by Ralf Gommers <[email protected]>