github.com/scipy/scipy commits | Ecosyste.ms: OpenCollective

MAINT,CI: signal: fix failing refguide check (#15694)

* MAINT,CI: signal: fix failing refguide check

[skip actions] [skip circle]

* MAINT: use n...

871dbb11277de514749ac5e9ccff4f0a523c98a8 authored almost 3 years ago by Tirth Patel <[email protected]>

DOC: stats.ttest_1samp: update example (#15699)

ffbbd1430d0138c494226b3923787b70253bdbeb authored almost 3 years ago by Matt Haberland <[email protected]>

DOC: stats.circstd: add reference, notes, comments (#15652)

Co-authored-by: Pamphile Roy <[email protected]>

8773a0aad49f085b4ca39295d8946021a49ba095 authored almost 3 years ago by Matt Haberland <[email protected]>

STY: Linting fixes

aaffd386fdef6f084fb7bd83e13481cfa7ac10f2 authored almost 3 years ago by Bas van Beek <[email protected]>

MAINT: Fix a few mypy errors

cf8d12a13f85cf88930ef93d830a1737a4724fe4 authored almost 3 years ago by Bas van Beek <[email protected]>

ENH: Add annotations for `scipy.constants`

c4b0d1ffef2bea2a2e7d0e87f7fe2fd4e60d53c2 authored almost 3 years ago by Bas van Beek <[email protected]>

MAINT: stats.bootstrap: fix bug when statistic returns Python float (#15691)

33cd28409c8bf9d8f8e3558307259860ed881c47 authored almost 3 years ago by Matt Haberland <[email protected]>

ENH: stats: Add 'alternative' and confidence interval to pearsonr (#15586)

* ENH: stats: Add 'alternative' and confidence interval to pearsonr.

The confidence interval ...

c4bd4ac28561a6f9620240ded15909401ccf3690 authored almost 3 years ago by Matt Haberland <[email protected]>

Merge pull request #15682 from zhaog6/utils_matrix

MAINT: sparse.linalg: Clear up unnecessary modules imported in `sparse/linalg/_isolve/utils.py`

17ccf4890fc993f7254f15a90cce3ca40dc8e763 authored almost 3 years ago by Tyler Reddy <[email protected]>

ENH: stats: Implement frozen random_correlation (#15681)

* ENH: Implement frozen random_correlation

Co-authored-by: Matt Haberland <[email protected]>

ad44afa0c8ecd6be03e5d4f5dc548cd67456b2cc authored almost 3 years ago by Namami Shanker <[email protected]>

MAINT: sparse.linalg: Clear up unnecessary modules imported in `sparse/linalg/_isolve/utils.py`

ad03eaa9301d4b073a5c1201b6798fe42e505e1b authored almost 3 years ago by Gang Zhao <[email protected]>

ENH: stats: Add freezability to `unitary_group` (#15671)

* ENH: Add freezability to unitary_group

d2a6ca5913878683880dffb1cc9a0345bcaaa121 authored almost 3 years ago by Namami Shanker <[email protected]>

DOC: fix intersphinx links (#15673)

3703946987dfa94d19bd3fb1c42b79b7156512da authored almost 3 years ago by Pamphile Roy <[email protected]>

BUG: MAINT: stats: make stats.boxcox even more flexible when lmbda is not None (#12225)

* MAINT: stats: make stats.boxcox even more flexible when lmbda is not None

Co-authored-by: M...

55acf5639a5ad8824602fee8991c3d16910168a2 authored almost 3 years ago by Laurynas <[email protected]>

BUG: stats: fix an error in UNU.RAN error handler

03a18b071412d0be5ab82fb5a70b1996087bd92f authored almost 3 years ago by Tirth Patel <[email protected]>

MAINT: Clarifies `F_onewayConstantInputWarning` documentation (#13523)

* MAINT: Clarifies documentation of 'constant arrays'

Co-authored-by: Matt Haberland <mhaberl...

8ecfa67651502dddea2c137b0c8dcb9eae44073a authored almost 3 years ago by Chris Keefe <[email protected]>

ENH: stats: fast wilcoxon exact calculation (#13438)

ENH: stats: fast wilcoxon exact calculation

Co-authored-by: boussoffara <alaeddine@easymedsta...

b12dcb2ac103b56dc3ced8ac5ce4b406f67181cb authored almost 3 years ago by boussoffara <[email protected]>

Merge pull request #15649 from tupui/ci_doc_pdf

DEV/DOC: remove latex/pdf documentation

60c60c6632a7b0970dc8616eaff1fe1d69116d13 authored almost 3 years ago by Tyler Reddy <[email protected]>

MAINT:stats: Renamed `*args` param to `*samples` (#15344)

* ENH: stats: Renamed `*args` param to `*samples`

Co-authored-by: Pamphile Roy <roy.pamphile...

8ba609c313f09bf2a333849ca3ac2bd24d7655e7 authored almost 3 years ago by srinivasan <[email protected]>

ENH: stats: make ortho_group freezable (#15653)

* ENH: stats: make ortho_group freezable

dbc2c3d3984681448a4789890383f2b073e89100 authored almost 3 years ago by Namami Shanker <[email protected]>

DOC: special: improve docstrings for many scipy.special ufuncs (#15622)

* DOC: special: improve docstrings for many scipy.special ufuncs

Co-authored-by: Tirth Patel ...

bfffbd4bd73bfc47f16ff4516469fd8a988313ba authored almost 3 years ago by Gregory Lee <[email protected]>

DOC: stats.burr12: fix typo (#15663)

f1f18546807b741ade189749238673134cae5b65 authored almost 3 years ago by Matt Haberland <[email protected]>

* DOC: stats: clarify burr/fisk distribution PDFs (#14003)

* DOC: stats: clarify burr/fisk distribution PDFs

Co-authored-by: Matt Haberland <mhaberla@ca...

ce4b43097356dfc42504d81d6164b73ee0896c71 authored almost 3 years ago by Mazen Sayed <[email protected]>

Merge pull request #15662 from mdhaber/edit_fit_doctest

DOC: stats.fit: fix intermittent failure in doctest

2a038646a0e79e353c31e53763ebe81ad889e7be authored almost 3 years ago by Evgeni Burovski <[email protected]>

DOC: stats.fit: fix intermittent failure in doctest

[skip actions] [skip azp]

4284641ff1dfea46b1fce1c02dd72eb4774c5086 authored almost 3 years ago by Matt Haberland <[email protected]>

DOC: update out of date instructions for benchmark imports (#15659)

980935e04e3b721a3dcb8527fbcd56cfdd5754cd authored almost 3 years ago by Jake Bowhay <[email protected]>

ENH: stats: add `keepdims` support to `_axis_nan_policy` decorator (#15478)

* ENH: stats: add `keepdims` support to `_axis_nan_policy` decorator

Co-authored-by: Matt Hab...

9fa33043310a37c472e576c90c5fc6a3a162b5d3 authored almost 3 years ago by Tirth Patel <[email protected]>

Merge pull request #15656 from scottstanie/main

DOC:linalg: Fix example for subset_by_index in eigh doc

8b7b234e820defd65bab53894a6d368da953c4c4 authored almost 3 years ago by Ilhan Polat <[email protected]>

DOC: fix example for subset_by_index in eigh

The main docstring correctly says:
To return only the second smallest to fifth smallest eigenva...

cb8357bc4908b9bbe418601e988b9734e59a21ff authored almost 3 years ago by Scott Staniewicz <[email protected]>

Merge pull request #15655 from rgommers/fix-paver

REL: fix small issue in pavement.py for release note writing

2f1fc78b3d76fb974be57e1948ac828f7734d6f8 authored almost 3 years ago by Ralf Gommers <[email protected]>

REL: fix small issue in pavement.py for release note writing

This snuck in with the move to Meson. It needs further cleanup,
we'll get rid of this whole file...

d66f132018a5ace05b2c04a297bd838f43223dab authored almost 3 years ago by Ralf Gommers <[email protected]>

Merge pull request #15645 from v0dro/cg-example-docs

DOC: Add code example to the documentation of `sparse.linalg.cg`.

649a80f40b66a79b69df9f9d3d18ff3288f6868c authored almost 3 years ago by Ralf Gommers <[email protected]>

Merge pull request #15651 from mdhaber/update_ks_2samp_doc

f27dc6094336a81b0df28a473d329553ef1fbbc4 authored almost 3 years ago by Pamphile Roy <[email protected]>

DEV: extra skip logic for workflow [skip circle] [skip azp] [skip actions]

e2507a5ef6aa593a27873e61c0178fda235cd1c4 authored almost 3 years ago by Pamphile Roy <[email protected]>

DEV: remove pdf upload and test skip [skip circle] [skip azp] [skip actions]

e648ae2104010c2395fd72cfee6f72b763d6ddf8 authored almost 3 years ago by Pamphile Roy <[email protected]>

DOC: stats: correct documentation of kstest

[skip actions] [skip azp]

a94250cdb50cabac80e6c9b1f39052f8413becdf authored almost 3 years ago by Matt Haberland <[email protected]>

DOC: stats: correct ks_2samp examples

[skip actions] [skip azp]

5f0fd915a011bf2d6b3f9c4a1afc70e10bd68d84 authored almost 3 years ago by Matt Haberland <[email protected]>

Merge pull request #15646 from mdhaber/update_ks_1samp_doc

9e8df2e78d1df43bc04fe6a6b846c96d7b8e9aaf authored almost 3 years ago by Pamphile Roy <[email protected]>

DOC: stats: refine ks_1samp example

837ea3500f19a39e1a4d1494fe33aa255745f001 authored almost 3 years ago by Matt Haberland <[email protected]>

DOC: Add example code for documentation of sparse.linalg.cg.

This commit is in partial fulfillment of #7168.

Add example code for documentation of sparse.li...

98b01f6141646ff766b32f86213fef9392548707 authored almost 3 years ago by Sameer Deshmukh <[email protected]>

Assume `import numpy as np` in examples for ellipr*

f0f5da8a56b252814f60803447fd0ec3f2e61bb4 authored almost 3 years ago by Leo C. Stein <[email protected]>

DEV: remove pdf images from doc and use PR name in version name [skip azp] [skip actions]

0c00540cbdc1c936317fb75aa2a914216db42865 authored almost 3 years ago by Pamphile Roy <[email protected]>

DEV: remove latex code and ref in doc

2b7ebd3c789cbebd6b80c940d075b7a990ddb78f authored almost 3 years ago by Pamphile Roy <[email protected]>

DEV: remove latex doc from CI

4c2364108844a208c392842808ff91032d73dfae authored almost 3 years ago by Pamphile Roy <[email protected]>

DEV: add check skip and refactor using commands

ff20fc30f48dab2a0cb30d60bcd771ca9953a594 authored almost 3 years ago by Pamphile Roy <[email protected]>

DOC: fix ignore divide in docstring

23e53df2301943f0532c92f01299f933adf2de33 authored almost 3 years ago by Pamphile Roy <[email protected]>

DOC: Add examples to documentation for ellipr{c,d,f,g,j}

833d7a9ffc247d4a1de91a2b2c49908dab9462c1 authored almost 3 years ago by Leo C. Stein <[email protected]>

Update scipy/stats/_stats_py.py

[skip azp] [skip actions]

1b656a1bf6c5293b1d89e61b0d0a4a13c142857e authored almost 3 years ago by Matt Haberland <[email protected]>

Update scipy/stats/_stats_py.py

[skip azp] [skip actions]

b6e2e6d545fcf34e9b5f69f4dda46d4230b36311 authored almost 3 years ago by Matt Haberland <[email protected]>

DOC: stats.ks_1samp: correct examples

[skip azp] [skip actions]

553ccfca2e1f87fe6f3acc44bf1054b4b3d1ac53 authored almost 3 years ago by Matt Haberland <[email protected]>

DOC, MAINT: fix links to wrapped functions and SciPy's distributions (#15637)

* DOC, MAINT: fix links to wrapped functions and SciPy's distributions

b529d4c3e3397789e9dc75920c34694e549d6441 authored almost 3 years ago by Tirth Patel <[email protected]>

Merge pull request #15640 from Smit-create/i_15638

ed21abe9d2d43920ad9b33c1be0d02de15a9fa68 authored almost 3 years ago by Pamphile Roy <[email protected]>

DEV: apply suggestions

8dec05e2779ed8361082aa3d2cfd1cd1cd75483d authored almost 3 years ago by Smit-create <[email protected]>

ENH, DEV: refactor project module info code

a51d60912d86afc601b680f6ac2f891477de504f authored almost 3 years ago by Smit-create <[email protected]>

ENH: try to detect scipy from dev installed path

0ed2ca7fe6d358d5939b7d8cb65a15302e05bf76 authored almost 3 years ago by Smit-create <[email protected]>

DOC: add example for `stats.mstats.compare_median_ms` (#14068)

* Added example for compare_median_ms

Co-authored-by: Matt Haberland <[email protected]>

428b4e4ba3214243fbc50d11b8bb3a6d66c5b691 authored almost 3 years ago by Soph <[email protected]>

MAINT: Add tests for new lsq_linear error catching and options

95806f5f3755e4d9534a4a6a0c00379bac672856 authored almost 3 years ago by eytanadler <[email protected]>

MAINT: rearranged order of arguments in lsq_linear and trf_linear for backward compatibility

c600069870d8b1cd03ee0cc6c04fd9e2d3e18f20 authored almost 3 years ago by eytanadler <[email protected]>

Merge branch 'main' of github.com:scipy/scipy into update_lsq_linear

32745c52d4bee3a3a58eddd70a3e5ace61704e8a authored almost 3 years ago by eytanadler <[email protected]>

BUG: levy_stable _fitstart fixes (#14476)

* Create test_levy_stable_fitstart.py

Test scipy.stats.levy_stable._fitstart() with data for ...

4a856f1469be6724c519e2439744dafe5df94471 authored almost 3 years ago by lutefiskhotdish <[email protected]>

CI: Improve concurrency to cancel running jobs on PR update (#15634)

77ab0a4dcf262dafc0e5e8a822c2019852937721 authored almost 3 years ago by Harsh Mishra <[email protected]>

Merge pull request #15603 from mdhaber/milp_benchmarks

BENCH: optimize: milp: add MILP benchmarks

c4829bddb859ffe5716a88f6abd5e0d2dc1d9045 authored almost 3 years ago by Nicholas McKibben <[email protected]>

MAINT: stats.rv_generic: make error message “Domain error in arguments” more informative (#13172)

MAINT: stats.rv_generic: make error message “Domain error in arguments” more informative

Co-a...

33f24234af42fa484854e97489b222d4cb764ce4 authored almost 3 years ago by ZhihuiChen0903 <[email protected]>

DOC: explain statistic calculation sign in ttest functions (#14087)

* Added documentation specifying how statistic is calculated in various ttest_ functions.

Co-...

d1295856f75362251161185c60b052531f05dfd5 authored almost 3 years ago by Jacob Lapenna <[email protected]>

Merge pull request #15629 from mdhaber/fix_trim1_axis

cf0696dea31c567fa07cc4fc5b74cba23dbc254d authored almost 3 years ago by Pamphile Roy <[email protected]>

ENH: Truncated weibull (minimum) distribution (#9974)

ENH: Truncated weibull (minimum) distribution

Co-authored-by: Ali Cetin <[email protected]>
Co...

de769003aa0d60d0592cc98f86b85a13a0e1fd04 authored almost 3 years ago by Ali Cetin <[email protected]>

MAINT: stats: deprecate non-numeric array support in stats.mode (#15573)

* MAINT: stats: deprecate non-numeric array support in stats.mode

d5b2f2c72ed41f52d9f9784e0acff97cfbba9b45 authored almost 3 years ago by Tirth Patel <[email protected]>

DOC: stats: note special cases of levy_stable (#8289)

* DOC: stats: note special cases of levy_stable

Co-authored-by: Joseph Albert <[email protected]...

7818647e1d0c7c5a29bb975919c43c4687c34af3 authored almost 3 years ago by Emmy Albert <[email protected]>

MAINT: stats: fix trim1 axis behavior

86eccb82a9b370c0d3717a8e8413faf94613bec0 authored almost 3 years ago by Matt Haberland <[email protected]>

DOC: examples for trimboth/trim1 in scipy.stats (#11148)

* Examples for trimboth, trim1

Co-authored-by: Matt Haberland <[email protected]>

5ec3c62887810fa9af622be3d8002c3929007831 authored almost 3 years ago by Brandon David <[email protected]>

TST, MAINT: ignore np distutils dep (#15626)

9fbd8f60b11110efe35da4b83a14e82982237df4 authored almost 3 years ago by Tyler Reddy <[email protected]>

Apply suggestions from code review

ab17ef7c5bc76531dce712c2181026718d2e5898 authored almost 3 years ago by Matt Haberland <[email protected]>

DOC: stats: update interval and moment method signatures (#15619)

9bb9189a710130f6b00b7dcde74a83d375e1e282 authored almost 3 years ago by Matt Haberland <[email protected]>

Merge pull request #14576 from mdhaber/mc_test

2c88e9e028fa022d78f0224364c2cf352464bbd9 authored almost 3 years ago by Pamphile Roy <[email protected]>

DOC: scipy.stats: fix documentation issues of multivariate distributions (#13103)

* DOC: scipy.stats: fix documentation issues of multivariate distributions.

Co-authored-by: M...

9e6b012fd89d09912dcb02593f35c48752631d16 authored almost 3 years ago by Tirth Patel <[email protected]>

Merge pull request #15611 from yotarok/fix_median_bias

BUG:signal: Fix median bias in csd with average="median"

3355c5f92fd3af591f41adb130ece76473e15fa2 authored almost 3 years ago by Ilhan Polat <[email protected]>

Update benchmarks/benchmarks/optimize_milp.py

bd706bbbe308c2a08d54de7cdc121832975cb456 authored almost 3 years ago by Matt Haberland <[email protected]>

Update benchmarks/benchmarks/optimize_milp.py

9472cb3bafd56e8391876d12d2231445e73ac254 authored almost 3 years ago by Matt Haberland <[email protected]>

Merge pull request #15614 from tupui/authors

REL: filter out @ in authors name and add count

fee7e06ea17d7de1b1b902c9fb39ebe850b4f9e9 authored almost 3 years ago by Tyler Reddy <[email protected]>

Merge pull request #15616 from rgommers/pin-asv

CI: pin asv to avoid slowdowns in 0.5/0.5.1

651e28c37dec0d0758d438c32cd48ba90dc353f4 authored almost 3 years ago by Ralf Gommers <[email protected]>

CI: pin asv to avoid slowdowns in 0.5/0.5.1

[skip azp]
[skip actions]

Closes gh-15568

ef5ee99afe4396de12f3c8f4476e9560df2ed437 authored almost 3 years ago by Ralf Gommers <[email protected]>

MAINT: stats.fit: move to new file (#15615)

9f5753d97a732c65855ac0c73607562f1e3a8bf6 authored almost 3 years ago by Matt Haberland <[email protected]>

Merge pull request #15436 from mdhaber/fit_distributions

fca37752450f07fefbc98e1e533896a07bf92215 authored almost 3 years ago by Pamphile Roy <[email protected]>

DOC: stats.fit: improve rendering of FitResult documentation; make dist/data private

19a2744000d9fdbcfa4b8499e57bc749dfcdf30a authored almost 3 years ago by Matt Haberland <[email protected]>

TST: stats.fit: mark tests slow/xslow

911ac9a9a684bdf4df8297dd98b8849ac33c7955 authored almost 3 years ago by Matt Haberland <[email protected]>

Update scipy/stats/_continuous_distns.py

[skip ci]

480249ecf5677775734a75378b6f4e332d3fd748 authored almost 3 years ago by Matt Haberland <[email protected]>

REL: fix count due to GH user [skip ci]

246468a338d81d6e6792e7e0feb3f7803a39801c authored almost 3 years ago by Pamphile Roy <[email protected]>

REL: find co-authors to add to the list

c4645a941948108f57a8b9ecc6f66658afa9c76a authored almost 3 years ago by Pamphile Roy <[email protected]>

DOC: fix wrong heading level

ef8e01d014a3dd0f3d2af16ef028bae08869ad92 authored almost 3 years ago by Pamphile Roy <[email protected]>

REL: filter out @ in authors name

b600dc6089640c523a6bd5e1bfaa09141a18e003 authored almost 3 years ago by Pamphile Roy <[email protected]>

REL: add commit count per authors for a release

c820719765edb6facef118a0c0788b13c66d84a1 authored almost 3 years ago by Pamphile Roy <[email protected]>

BUG: Fix median bias in csd(..., average="median") (scipy#15601)

This commit fixes the bug that wrongly computes _median_bias from the
number of frequency instea...

ad09488269cfa9d8770f6cc8e457e7ca7ea6c619 authored almost 3 years ago by Yotaro Kubo <[email protected]>

MAINT: allow multiplication sign `×` (#15606)

362524aca23c1e2b158675616e1675fd36fbe13f authored almost 3 years ago by Matt Haberland <[email protected]>

MAINT: stronger test for returned Jmin from `differential_evolution` (#15605)

* MAINT: stronger test for returned Jmin

a14cc1c82910f4b2aabc0e639c80720e4485a3b3 authored almost 3 years ago by Andrew Nelson <[email protected]>

BENCH: optimize: milp: add MILP benchmarks

1b6173f917e5cb108241e3deff7685b5ef11a867 authored almost 3 years ago by Matt Haberland <[email protected]>

Merge pull request #15460 from mdhaber/milp_rebase

ENH: optimize: milp: mixed integer linear programming

821f62242c2c0b4e1e96af476a1293859439e47b authored almost 3 years ago by Nicholas McKibben <[email protected]>

Merge pull request #15597 from pllim/patch-1

DOC: update `hyp2f1` docstring example based on doctest

b06254e5a08a0fad05f6e5a09b7c847c893ff355 authored almost 3 years ago by Ralf Gommers <[email protected]>

STY: fixed linting issues in lsq_linear

0f5f00c85c584b891adb32350dd8668c5c05a988 authored almost 3 years ago by eytanadler <[email protected]>

ENH: added lsmr_max_iter option to lsq_linear to better handle poorly conditioned matrices

bc35e5148240fc99d01be12e56da8e149f53a8a5 authored almost 3 years ago by eytanadler <[email protected]>

BUG: corrected lsmr_tol in lsq_linear's first call to lsmr

b7826ef75df12080296bab3252508ddd95d6f174 authored almost 3 years ago by eytanadler <[email protected]>