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github.com/scipy/scipy
SciPy library main repository
https://github.com/scipy/scipy
See https://github.com/Reference-LAPACK/lapack/pull/942
8c96a1f742335bca283aae418763aaba62c03378 authored 12 months ago by Ilhan Polat <[email protected]>This patch is a fix to AIX build break that happened due to a variable defined as hz in _amos.c....
e76a07ca7e26233f1f78a95f355227cb44f44e7e authored 12 months ago by Aditya Vidyadhar Kamath <[email protected]>52732578a67e1f243b466e0668d99f6ec85d0d08 authored 12 months ago by h-vetinari <[email protected]>
MAINT: special: remove use of `numpy.math` from `_cdflib.pyx`
730010e77319606718b3d50a8fc402ba9cc629bc authored 12 months ago by Ilhan Polat <[email protected]>
This Cython module should not be used, since it's likely to be
deprecated and we cleaned up all ...
MAINT: stats: fix editable install issue in `qmc` and MPL-related issue in test
7ca49f47fa24887494c933185b29f9d2959aecc6 authored 12 months ago by Tyler Reddy <[email protected]>MAINT: array types: rename `as_xparray` to `_asarray`
2a4d6e978baa015935e009cd00537d2ddeee2531 authored 12 months ago by Ralf Gommers <[email protected]>
`__tracebackhide__ = True` should be used for all testing functions,
just like it is in `numpy.t...
These surfaced with the more strict reference implementation in
https://github.com/numpy/numpy/p...
816d59dad58cd9820900062ba2279e807865a97f authored 12 months ago by h-vetinari <[email protected]>
BLD: set default `cpp_std` to `c++17`
736216d5ea2645cb76f4468d02addc2d18acd5c0 authored 12 months ago by Ralf Gommers <[email protected]>MAINT: remove unused itertools-import in scipy.interpolate._interpolate
2353b154451fa77ee5f009b696ae82070ed8eab6 authored 12 months ago by Evgeni Burovski <[email protected]>this already got ignored due to the presence of `__all__` in that module
63a9298b1c7d9568eeb8891aada742dfc45fc0c4 authored 12 months ago by H. Vetinari <[email protected]>
This code is broken when using an editable install, generating a lot
of hard to understand failu...
[wheel build] [skip circle]
10c2a45586d8a169a0407efc90753ebfc0dbd626 authored 12 months ago by Lucas Colley <[email protected]>a403bde8346314fc39decfd5e60347c3d7a8df14 authored 12 months ago by Jake Vanderplas <[email protected]>
Specific to numpy 2.0.0-dev. This test fails a lot when trying
to use the test suite in envs whi...
MAINT: vendor `pocketfft` as git submodule
6a71dd5820f5984208584f7e57e71946bd0d39f0 authored 12 months ago by Tyler Reddy <[email protected]>TST: stats: fix a few issues with non-reproducible seeding
909df2e270db9f6da2495f62326c337885b2a197 authored 12 months ago by Matt Haberland <[email protected]>
The use of `hash('a_descriptive_string')` is cute, but unfortunately
hashes are not reproducible...
f739fd4a9a58f5dfdcb6787d910257086680bea9 authored 12 months ago by lucascolley <[email protected]>
[skip circle]
e79dfb2ca5a866b90d37d171d2f4cc2889c116e4 authored 12 months ago by lucascolley <[email protected]>d527d30849f55799fbcdb647aef7f3ad603fcac8 authored 12 months ago by lucascolley <[email protected]>
* MAINT:special:amos:Remove AMOS Fortran library
[skip ci]
* ENH:special:amos:Rewrite publ...
8e9d43838b7db8d40fc4567f3aafeed68466b464 authored 12 months ago by Ilhan Polat <[email protected]>* SciPy `1.12.0` release notes formatting improvements
e5f21298b62fb03732f000645d2caaa67aad8800 authored 12 months ago by Daniel Schmitz <[email protected]>* MAINT: stats.rankdata: ensure correct shape for empty inputs
6ace6377c481e46ef154b45337ce5c2eb6452a6e authored 12 months ago by Jake Vanderplas <[email protected]>87f8428b227dd8962d8658482bd8a150a31292a4 authored 12 months ago by Chethin Manage <[email protected]>
43a96e2d766b8751254b88887bca95e87fa50521 authored 12 months ago by Andrew Landau <[email protected]>
MAINT: make isinstance check in `stats._distn_infrastructure` more ro…
a75b1f0e0fa59c175bb22baa6a8397f4b2cb9740 authored 12 months ago by Evgeni Burovski <[email protected]>
This check for a list return type from `atleast_1d` may fail if
in NumPy 2.0 the return type wil...
6bdb149afcfa6b5b0b78e366b19ea718919e4359 authored 12 months ago by lucascolley <[email protected]>
MAINT: fix use of `unique(..., return_inverse=True)`
c5197c435440be51152c7930e421525b876a1793 authored 12 months ago by Tyler Reddy <[email protected]>
Code was written to expect a 1-D array with the inverse
indices, and that got changed in NumPy i...
* ENH: stats.boxcox_normmax: add parameter ymax
19dad8405e3405c00845a8ef20b7461f5d0c490e authored 12 months ago by Xuefeng Xu <[email protected]>BLD: improve scipy-openblas dependency check
4e69f71d587b3b4ebaf922b9b3a9d48f03d7b007 authored 12 months ago by Ralf Gommers <[email protected]>BLD: make scipy build warning-free with LTO enabled
bd00d29cae54fd28ea58229c5ce5aa729ff52666 authored 12 months ago by Ralf Gommers <[email protected]>MAINT: fix BLD label typo
29fe6bda96e2819a437f1fe6ae67acfa25dea295 authored 12 months ago by Ralf Gommers <[email protected]>[skip ci]
1137d9d6dd6e2bfd59e5ecf02be2bd2fc746dab8 authored 12 months ago by lucascolley <[email protected]>BLD: simplify pythran version requirement in meson
2665b0c003c0b2b8d4ddb0db533721956ae11597 authored 12 months ago by Ralf Gommers <[email protected]>
This avoids looking for scipy-openblas with CMake (which we never want),
and avoids looking for ...
Much fortran code is not LTO-safe, and would require modernizing that
fortran code, probably. We...
For a find_program() invocation, the version check can be inlined into
the lookup. This is diffe...
* DOC: stats.rv_continuous.fit: add example of custom optimizer
89049ddf566cb34cc4a87383a467ca82a6724d1d authored 12 months ago by m-maggi <[email protected]>CI: fix prerelease job to use numpy 2.0, and add a second job to test ABI compat
906e6cd9bb022e78a07b34636bee64813ce56afa authored 12 months ago by Tyler Reddy <[email protected]>
The warning message in NumPy changed between 1.22 and 2.0, it used
to say "in true_divide" and n...
Note that this job uses Python 3.11 rather than 3.12 to avoid the
problem with MapWrapper report...
* DOC: Add example for mstats.brunnermunzel
48e3215d5cd39da5d26c9c3b81a5881f5ea13783 authored 12 months ago by Stefanie Senger <[email protected]>* TST: stats: improve test for geometric zscore
12c37da2f57f895fe76248c51f6d621ad6baabf5 authored 12 months ago by Quentin Barthélemy <[email protected]>Closes gh-19846
d04c0e424a5d4f32949cb438b89748af3115057d authored 12 months ago by Ralf Gommers <[email protected]>DOC: fft: improve `s` description for real transforms
d23363809572e9a44074a3f06f66137083446b48 authored 12 months ago by Ralf Gommers <[email protected]>TST: move reference data for test_real_transforms to a fixture
c927b4fc38f91e707749498439df0f0d9b5fb227 authored 12 months ago by Ralf Gommers <[email protected]>TST: fix more cases of fd leaks from np.load()
6c01f51aa951a17202d55ed50a1115460520b7c9 authored 12 months ago by Evgeni Burovski <[email protected]>
Fix a few more cases of `np.load()` results not being closed.
To confirm them, I've used the fol...
[skip circle]
e60a60394d61fe0081fc5f05f68ee585e07e4406 authored 12 months ago by Lucas Colley <[email protected]>DOC: Add `fft` to list of submodules in tutorial
1691f1353125e110499b1184dfe175907e3fa8c4 authored 12 months ago by Ralf Gommers <[email protected]>
Move the code for getting the reference data in test_real_transforms
to a fixture. This easily ...
c3dd6b15ca105a387fc871ad39e72ad1bf4a3aa3 authored 12 months ago by theplatypus <[email protected]>
MAINT: set `NPY_NO_DEPRECATED_API` also for Cython code
02aaf8dcf2e6afbd20c74b9274343e0871e4722a authored 12 months ago by Ilhan Polat <[email protected]>[docs only]
c5e08aa0d7a19d7351fa28294801ce844124a747 authored 12 months ago by Lucas Colley <[email protected]>MAINT: `CODEOWNERS` syntax fix and changes
e7c6a0d1ce504c528ab00d19ddac6bdb1ae1cb36 authored 12 months ago by Tyler Reddy <[email protected]>* DOC: Improving "Spectral Analysis" section in User Guide
* DOC: Remove header comments of p...
446a9dbcab46c6351adb50369af7c4050f443a09 authored 12 months ago by Dietrich Brunn <[email protected]>d0d72e55760bbf4158f6672bc8e92c0c9a9a13b6 authored 12 months ago by Ralf Gommers <[email protected]>
The one minor issue is a few "redefinition of macro" warnings because
Pythran defines `NPY_NO_DE...
This is a follow-up to gh-10840.
d447b2bf9741062d3f146914aba1affc9deb4628 authored 12 months ago by Ralf Gommers <[email protected]>MAINT: interpolate: fix build warning from `_ppoly.pyx`
88c60ff2b54e4a7fef2f578d010939343f9fd6ca authored 12 months ago by Evgeni Burovski <[email protected]>DOC: Add Example to lbfgsb docstring
6ebea8296ee27630ef9ac52f443c5a8326ceeb68 authored 12 months ago by Kai <[email protected]>94c115534d8624757dcea7f92f270bcc36380909 authored 12 months ago by Lucas Colley <[email protected]>
c6c91f6269ae8b329f6b85c776ba5e6f8f1e1f0c authored 12 months ago by Lucas Colley <[email protected]>
This warning is new with GCC 12 (and a false positive, see cython#5937):
```
[6/7] Compiling C ...
68e65d3286e19a9209120b55732ae1cd099961d1 authored 12 months ago by Tyler Reddy <[email protected]>
MAINT: spatial: fix build warnings in `ckdtree` code
67aac4648b4b02473c9f8ab6b43033a87dac6f20 authored 12 months ago by Tyler Reddy <[email protected]>BLD: propack: resolve missing return value warnings
d07d2d7ea5fc2628cd7353539081e0b3cbf9619b authored 12 months ago by Ralf Gommers <[email protected]>TST: linalg: Test Cython LAPACK complex ladiv
5d67dff09578a9e5dca9eb30a2ea6a32c39504e2 authored 12 months ago by Ralf Gommers <[email protected]>First warning:
```
[5/8] Compiling C++ object scipy/spatial/_ckdtree.cpython-310-x86_64-linux-g...
* related to gh-19605
* fixes 213 test failures on Windows alongside NumPy `main`
by restori...
[skip ci]
527ba3755ceeca2e54fb2480dc936818345c67c7 authored 12 months ago by lucascolley <[email protected]>BLD: resolve missing prototype warnings in lsoda/vode
12763351358202d414064292489bdcdb952b0358 authored 12 months ago by Ralf Gommers <[email protected]>0348d2f7f47e11170bc7581b4f4b178c0db39f16 authored 12 months ago by Lucas Colley <[email protected]>
8b4eef3ccee86d9e6a40a9011a5dced4733473ec authored 12 months ago by thalassemia <[email protected]>
Co-authored-by: Daniel Schmitz <[email protected]>
89d0012bb667f5ad0792275216a578293fac4c07 authored 12 months ago by anupriyakkumari <[email protected]>a495138278ac9b95023b5ddbdb30d76eecf2ddab authored 12 months ago by thalassemia <[email protected]>
93a07f4a5ee0639944287b8370773997be1c0284 authored 12 months ago by thalassemia <[email protected]>
[docs only]
c7893feeb21ca933a1f2521cf920323986a079f6 authored 12 months ago by Matt Haberland <[email protected]>[skip ci]
c9e6d27c2b61867d78b6789e39327f806987cda6 authored 12 months ago by Matt Haberland <[email protected]>
Co-authored-by: Lucas Colley <[email protected]>
Co-authored-by: Daniel Schmitz <40656107+...
e5fd9faa554e44e682191f83e0c0d3d2e084ff2d authored 12 months ago by anupriyakkumari <[email protected]>
committing more suggestions
Co-authored-by: Lucas Colley <[email protected]>
7eca0697c3b75fb89111a57fceaed4866e91cbc7 authored 12 months ago by anupriyakkumari <[email protected]>Committing suggestions
Co-authored-by: Daniel Schmitz <[email protected]...
a892844f725dda442d139d4b14ef100496172252 authored 12 months ago by anupriyakkumari <[email protected]>* add description
* shorten description
* shorten description
* inverse doc
* Update...
7ff74ee275de307d6a17bebff4ea10cf58d35dff authored 12 months ago by Aman Atman <[email protected]>093e6455732d27beedb9e1a91524139810299cdd authored 12 months ago by Albert Steppi <[email protected]>
ENH: stats.mannwhitneyu: vectorize statistic calculation #19749
e35407702d2ad72755bccf548ef93fff82014f42 authored 12 months ago by Atsushi Sakai <[email protected]>BENCH: Added benchmarks for individual distance metrics
dbcd3dbf71ead579dbb5816dcf61ffe8adb5e5cb authored 12 months ago by Tyler Reddy <[email protected]>* ENH:MAINT:special:Cythonize cdflib
[skip ci]
ENH:MAINT:special:Some fixes on cdfchn
E...
667b8d4d058024468c75b74fb35ab64abc3ccbd1 authored 12 months ago by Ilhan Polat <[email protected]>648ba8c633e35f02fa062ead1f882e804d8582af authored 12 months ago by Daniel Schmitz <[email protected]>
TST: fix compatibility with pytest 8
b91545ad6d42a0005c8a368dc61e967074bd44d8 authored 12 months ago by Ralf Gommers <[email protected]>* MAINT: integrate.cumulative_simpson: various improvements
cff2279fdfabacf7f5110ff7ed697fe9910bf9be authored 12 months ago by Praveer Nidamaluri <[email protected]>
The second half of the test had nothing to do with test_none
ever since its introduction in ce7e...
By and large, these should all be filtered out in the implementation,
not in the tests, see #19805.
For example, in the deprecation of positional use of `tol=` in sparse solvers.
f20cdcee07cf21b49cb07b896001320db3c75fa3 authored almost 1 year ago by H. Vetinari <[email protected]>269673d30af06a14354f5dabf88c21673e607c04 authored almost 1 year ago by Matt Haberland <[email protected]>