github.com/scipy/scipy commits | Ecosyste.ms: OpenCollective

API: fix handling of NaNs and empty arrays in factorial{,2}

a7b5669164193f676e428f2c21e8b804a020d34d authored almost 2 years ago

MAINT: simplify factorial2 approximation

4a9b32079a2ba535b661566af6e531e90b34b62d authored almost 2 years ago

ENH: add hint to factorialk errors to try factorial{,2}

64a8e85fed8756400e2dc2d658da00902b0c42e1 authored almost 2 years ago

TST: add tests for scalar corner cases for factorial{,2,k}

also improve errors for complex inputs in special.factorial

7f26f05313b9411e3413fbb27c4abfe55d7c7dae authored almost 2 years ago

ENH: handle dtype hierarchy for k>1 in factorialk

9e442c8f22b7a6e0cf36c1079f05efa38d8ae179 authored almost 2 years ago

MAINT: improve clarity in _exact_factorialx_array

No functional changes.

4b240ad7162870bfa9f49411bf2115e6a404fddd authored almost 2 years ago

TST: add test for array-likes

b7d786bd4fbc6e9a301ffb4be9f80e9928649b1d authored almost 2 years ago

BENCH: update factorial{,2,k} benchmarks

Remove benchmarks for floats with exact=True (not supported
anymore) and extend the tested range...

83a4a24d3bfade80b4b63d0d8be929460532e40c authored almost 2 years ago

TST: add reference tests for factorial{,2,k}

d050d639b7b4f03c5100435292408944a2c438b7 authored almost 2 years ago

MAINT: accelerate exact-path of factorial{2,k}

9a63e486887e1f1f89039afee43a06dfab430fda authored almost 2 years ago

API: fix handling of small integers in factorial2/factorialk

This reverts commit 6c4a1970e36a75556ea228a85b77bcea1188092a.

This reverts commit f428dd960d5b9...

5df5729bff3c39eea2eaf1c60bd254a4114dcfff authored almost 2 years ago

API/BUG: consistently handle float arguments in factorial

Also avoids math.factorial for these; which errors in 3.10+.

Fixes GH-13122

7b4ae1023e50462d78f2d5681bf411782da5fa01 authored almost 2 years ago

TST: fix fallout from numpy PR 23399 (#18402)

ea3a98443a6cc102c9f007b1b04fb303fa16a9a3 authored almost 2 years ago

TST: stats.cosine: modify test to silence failure (#18382)

[skip ci]

bfa2d1d269b3fd3b7cc8157feac881dd295a3ef0 authored almost 2 years ago

Revert "BLD: Add const to Cython signatures for BLAS/LAPACK (#18247)" (#18405)

This reverts commit d7f13663739288094f11a94daab368eb34bb8d13.

[skip ci]

7ac74018e229c4cb661c9c9a9961a5030ff3cbbd authored almost 2 years ago

DOC: improve description of the method argument in mannwhitneyu (#18400)

Co-authored-by: Pamphile Roy <[email protected]>

085efc343906e2ab2d9bbb079e731c33a39745f0 authored almost 2 years ago

DOC: Replace "HACKING" with "hacking" (#18399)

df68479db21d8e382a120bd9b77d85e4460faf8b authored almost 2 years ago

Merge pull request #18212 from mdhaber/gh18136

f797ac7721310c7bd98bae416be1bed9975b4203 authored almost 2 years ago

Merge pull request #18392 from stepeos/main

BUG: optimize.differential_evolution: fix division by zero error

92d767c59c10e3012e510008452b1e9a35871636 authored almost 2 years ago

Fixing #18388 possible division by zero

cf70442b5fd7491beb13eb215e11ada2738c6a34 authored almost 2 years ago

Merge pull request #18383 from ev-br/detrend_tests

MAINT: add smoke testing of signal.detrend

52a5ecb875588fcef5bc18dcd84b302a9ba9bd39 authored almost 2 years ago

MAINT: signal.detrend: remove `np.cast` call

c15c895e66d415974fe2fc82c662b8a74fd8bc09 authored almost 2 years ago

TST: signal.detrend improve smoke test coverage

44cb7691c754ff5d4eb9898590aa1e49b0561a72 authored almost 2 years ago

TST: optimize._bracketer: add tests

5f15ccfacb8ef441533c63a68b930bcaea8fe0d9 authored almost 2 years ago

ENH: add `entropy` method for multivariate t distribution (#18324)

Co-authored-by: Matt Haberland <[email protected]>

cc33f4c22381e79ac82d9e1e254ec22fa7c0a6db authored almost 2 years ago

DOC: improve neg. binomial function examples in `special` (#18360)

* DOC: improve neg. binomial funcs examples

* More entries in see also [skip actions][skip ci...

edff81c2208cc411f0006dad8f9c1f0ffd78f409 authored almost 2 years ago

Merge pull request #18380 from dschmitz89/vonmisesfisher_fit_fix

MAINT: Limit fittable data for von mises fisher distribution to 2D

7b16a1040afe54b090efefea7b749bbe3b1c3ae7 authored almost 2 years ago

Merge pull request #18379 from dschmitz89/vonmises_tests

TST/MAINT: remove vonmises fit correctnes test for extreme kappa value

40ef60fe6e045d6f84f2cc021dccf0610792283b authored almost 2 years ago

DOC: add output_type to signature of cKDTree.query_pairs (#18378)

56ca5d58761fcc550ff7de9cc0dffd0e7a94b145 authored almost 2 years ago

MAINT: Limit fittable data for von mises fisher distribution to 2D

d6f9ae02582c3c3d45827acb1c027030857e5b20 authored almost 2 years ago

TST/MAINT: remove fit correctnes test for extreme kappa value

16958d238ef50026657fba0178aa889fa9cb48a2 authored almost 2 years ago

Merge pull request #18369 from andyfaff/windy

CI: bdist_wheel windows job Azure --> GHA

3b35934781d5a3f65432fc5a0291d455d30c3eae authored almost 2 years ago

MAINT: correct rtools version

308d768c7855b033c294563f793a28e51baa53a0 authored almost 2 years ago

CI: remove comments

db5e814a6b9ddbb6b0f8a19be3205e44fae72e02 authored almost 2 years ago

CI: remove comments

edb92d6cf0cf0cf325c7356a0a790f7ed26e2466 authored almost 2 years ago

CI: bdist_wheel windows job

ded9939f48677be4facadf719f4a8a23e61ca14a authored almost 2 years ago

Merge pull request #18374 from andyfaff/pkgconfig

CI: pin to rtools40

bf2af563d0146f180cb8f9246e968f40ece5c80a authored almost 2 years ago

MAINT: optimize._bracketer: make some parameters keyword-only

72b366fe046849527d694bbccfb357d3a187d985 authored almost 2 years ago

CI: pkg-config windows

abfaab3b76a1bb6f09ba74a6a5b4718b7036f22e authored almost 2 years ago

CI: pkg-config windows

4cb17ec049b95f076e6fc23cbb3e46aa31b08f6d authored almost 2 years ago

CI: pkg-config windows

def7e06a1696ccad9c705b32465ef853d1a88eea authored almost 2 years ago

CI: pkg-config windows

ce59c2addcf23ed11183584d5ecda5f580052948 authored almost 2 years ago

MAINT: stats: more avoidance of deprecated NumPy usage (#18352)

7c745030a2c71a00c3dd405236f3291a53136390 authored almost 2 years ago

TST: Update list of modules for import cycle checks (#17947)

Co-authored-by: Scott Shambaugh <[email protected]>

c0b6ec3507b52c4af2392f3628166ddcce27204b authored almost 2 years ago

DOC: stats.chisquare: attribute is pvalue, not p (#18370)

469a984681344303a35be00866fba7bc88d71c69 authored almost 2 years ago

Merge pull request #18284 from boris-martin/boris-martin-patch-1

DOC: improved gmres doc on preconditioning (scipy.sparse.linalg)

[skip ci]

3c02c0ea06fa19b6ed89f3dc68c8a27f2e9c5de1 authored almost 2 years ago

Merge pull request #18362 from matusvalo/pxd_noexcept

MAINT: Add noexcept function declaration to `_cythonized_array_utils.pxd`

[skip ci]

98654dfd849c9ddfcd2fb4b44ff94113cb369169 authored almost 2 years ago

TST: add Generator case for reset test.

[skip circle]

031a535829cdf1c916514ac02e77b899fef8a4ec authored almost 2 years ago

FIX/TST: reshaping issue

1f94b82103325f391aeec4ce8aa8ec0bf707ce65 authored almost 2 years ago

Merge remote-tracking branch 'origin/qmc_seed' into qmc_seed

1d7152507c6df4b331f73bc7207a94c730969de9 authored almost 2 years ago

BLD: Add const to Cython signatures for BLAS/LAPACK (#18247)

* BLD: Add const to Cython signatures for BLAS/LAPACK

Use regex to parse CBLAS/LAPACK headers...

d7f13663739288094f11a94daab368eb34bb8d13 authored almost 2 years ago

ENH: integrate.simpson: improve accuracy for even number of points (#18209)

Co-authored-by: Jake Bowhay <[email protected]>

572a373aac2bf14ee6a0c164aac9734b54594b8f authored almost 2 years ago

Merge pull request #18351 from andyfaff/source

CI: remove Azure sdist job

[skip ci]

95d5b38e3d6e20fd3971cfd2b68769a668d8f324 authored almost 2 years ago

CI: azure win no pythran job is already gha

c542d1325302e3161e0ee3576c985ad980672f6a authored almost 2 years ago

CI: python-dbg uses vcs->sdist->whl route

7ce64ef49a3478a6fcc7b50abbe3a73d3e2a8a2c authored almost 2 years ago

Maint: Add noexcept function declaration to _cythonized_array_utils.pxd to match _cythonized_array_utils.pyx file

c3d9bd2f94dec58e64da24f116a946cc11a03beb authored almost 2 years ago

MAINT: Fix broken link in setup.py (#18359)

[skip ci]

290512429ccf5a0933165a6ec00d7d3748725a4d authored almost 2 years ago

Merge remote-tracking branch 'upstream/main' into qmc_seed

f960f12b5e9dc08c7fed4ff0bedb20d0bc26f586 authored almost 2 years ago

ENH: stats.moment: enable non-central moment calculation (#18152)

Co-authored-by: Matt Haberland <[email protected]>

419b58901f011bd3a0106f99607baff5e4542d9b authored almost 2 years ago

MAINT: stats.dgamma.entropy: avoid deprecated NumPy usage and simplify (#18349)

8e13bb2f3a0afd5d7f93f3dc3a4a8add1b8ab1c1 authored almost 2 years ago

DOC: examples for special functions related to neg. binomial distribution (#17680)

ab83fe2182ef04d3d22150f76c35f3becfb475dc authored almost 2 years ago

catch a more specific error in test

Co-authored-by: Jake Bowhay <[email protected]>

657d2d5462bfa328aad9ae09675a92ceb6fbd266 authored almost 2 years ago

BUG: properly raise from invalid division

3b05397169231c769599189e880aa303e8d435a2 authored almost 2 years ago

Merge pull request #18353 from charliermarsh/charlie/ruff

Migrate ruff.toml configuration to lint.toml

[skip ci]

5db471907f7d2e838c5c073c45928885e127ecec authored almost 2 years ago

ENH: stats.monte_carlo_test: add support for multi-sample statistics (#18231)

* DOC: stats.monte_carlo_test: revise documentation for multiple samples in`data`

* ENH: stat...

f40d89389d425e99ffd0a5f19be655c7a8f48564 authored almost 2 years ago

FIX: linter errors about format

5faf5241d58ac2c70adc355430be9dc9a466dfe1 authored almost 2 years ago

ENH: simplify nested _ScaledLinearOperator

60be1620e6d12ef3ea1c815b24755a644026ab1a authored almost 2 years ago

ENH: allow dividing LinearOperator by scalar

d577ebe16b2c1e88f15f1c049ff622a719a06c5b authored almost 2 years ago

Merge pull request #18339 from mdhaber/gh17137

TST: optimize: fix test_milp_timeout

fdea3a89fe0a823c1f0652e78c76f707571b0ea1 authored almost 2 years ago

DOC: ndimage.distance_transform_bf: add example (#18287)

aadf63928f17aa4d56c0867f7b67e817a01e2cbd authored almost 2 years ago

Migrate ruff.toml configuration to lint.toml

63e91d85c4e24b595be77defe50d16f89c06b4e7 authored almost 2 years ago

Merge pull request #18350 from andyfaff/zeros

TST: use np not math for functions to avoid conversion of ndim>0 to scalar

4fd7e0219542096d9fff24a74c068a262457a90b authored almost 2 years ago

CI: remove Azure sdist job

33f890060a28815586653ac8b2a1551795edbf10 authored almost 2 years ago

TST: use np not math for functions to avoid conversion of ndim>0 to scalar

97aeb0450078f7cacd90658677ab1cf5cd4cbf3b authored almost 2 years ago

Merge pull request #18345 from rgommers/fix-win-py39-devpy

DEV: work around pathlib bug affecting dev.py for Python 3.9 on Windows

d6cd110e889ab03a2283fd7e00664062b3ea8e7e authored almost 2 years ago

ENH: optimize: add private function to find root bracket

04096a2ed645a281ce0862e6c617f81d76259534 authored almost 2 years ago

Update scipy/optimize/tests/test_milp.py

[skip ci]

9be1894c8cfb5b57a9c2ffa101148cc8a9fcae31 authored almost 2 years ago

TST: stats.mstats.median_cihs: strengthen test (#18342)

599206e9df0850175347e6e7223ffaeb0d0e6af2 authored almost 2 years ago

BUG: integrate.solve_ivp: Check for initial conditions finiteness (#18077)

Co-authored-by: Jake Bowhay <[email protected]>
Co-authored-by: Tyler Reddy <tyler.je.reddy@...

070b2a82a0058c2496db651853fcbbe15361e7ed authored almost 2 years ago

CI: address review comments

[skip cirrus] [skip circle]

0aef2dbb7100f24f07038cad755ba6fc6de5d4ec authored almost 2 years ago

Merge pull request #18344 from matusvalo/cpow

MAINT: Set cython compiler directive cpow to True

102eda31c7482746b65b6dab6bba2b0d3f3e129b authored almost 2 years ago

Merge pull request #18343 from ev-br/math_prod

MAINT: use math.prod (python >= 3.8)

57c1f6e9310e803c04d084d5eb445f8351ae160e authored almost 2 years ago

ENH: stats.vonmises.fit: increase range of fitted `kappa` (#18323)

ENH: stats.vonmises.fit: increase range of fitted `kappa`

8fbaed593f1b010c83b466d1d2ec85eeea06b81a authored almost 2 years ago

Set cython compiler directive cpow to True

21278e8ddc6d641ddf8a26da7fecf289861bf134 authored almost 2 years ago

DEV: work around pathlib bug affecting dev.py for Python 3.9 on Windows

Also remove a workaround in a Windows job for this issue, and clean up
the code for `dev.py --wi...

728d0d83dfc791875a9c966266d16b370ef05993 authored almost 2 years ago

Merge pull request #17267 from WarrenWeckesser/special-tklmbda-update

DOC/MAINT: special: Several updates for tklmbda

e22bb488791911aa3c9bfa1c75fd66ef97179855 authored almost 2 years ago

MAINT: use math.prod (python >= 3.8)

954d0087eaa19f1b0a3fbbc17eeda45ee989f852 authored almost 2 years ago

DOC: interpolate: declare Rbf legacy (#18340)

88687ae6a95fdae9b89a2599c1f9059095d98658 authored almost 2 years ago

MAINT: optimize: fix test_milp_timeout

8995748b7513d060d03b5a18630fb2813ec9f906 authored almost 2 years ago

MAINT: stats.shapiro: override p-value when len(x)==3 (#18328)

Co-authored-by: Pamphile Roy <[email protected]>

9a8ec796da00861503f452f6f8e6e401e47baad3 authored almost 2 years ago

CI: windows cp311 use-pythran=false full, sdist GHA (#18333)

[skip ci]

3ee0484acbf2555d5cb8701d1b142fef8e9237e8 authored almost 2 years ago

Update scipy/stats/tests/test_qmc.py

c3368985dc8c1dcf606109f72e82f3dfd1bb6b97 authored almost 2 years ago

Merge pull request #18325 from andyfaff/windy

CI: move Azure cp39/full/win job to GHA

d81c948a75aaed3b0345be7dfb8b8e0282afc0fb authored almost 2 years ago

Merge pull request #18330 from rgommers/meson-updates

BLD: avoid build warnings on Windows, bump pybind11 and meson min versions

34690eddca389d90d91c44caa46ba6701c227db7 authored almost 2 years ago

Merge pull request #18332 from rgommers/fix-multivariate-cdf-test

TST: fix minor tolerance issue for `stats.multivariate_t` test

a302eebced9bb06598dc942ed0d31b88bb760817 authored almost 2 years ago

TST: fix minor tolerance issue for `stats.multivariate_t` test

Failure looked like this on a fairly standard 64-bit Linux build setup
from our default `environ...

cc5e77dbbbabf5de34948a557f7297424db62194 authored almost 2 years ago

BUG: dev.py installed is not absolute

812dcf3b86cf3c279868118c8a95fdd0eeaf5ac5 authored almost 2 years ago

TST: stats.mstats: add `median_cihs`/`sen_seasonal_slopes` tests (#18020)

* add: tests for median_cihs
* add: tests for sen_seasonal_slopes
---------

Co-authored-by:...

7116af119d82ce305e496cf23f0eae3990657097 authored almost 2 years ago

BLD: avoid `MS_WIN64` redefined warnings

Closes gh-18329

853f150f2ef1fbf3f1250dcef623af48a186d419 authored almost 2 years ago

BLD: require meson>=1.1.0, pybind11>=2.10.4, simplify pybind11 detection

Meson 1.1.0 supports `dependency('pybind11')` and that's now guaranteed
to work for pybind11 >= ...

a0f981102d6b5eca5d3dc528b0070e2ea3d84f69 authored almost 2 years ago