github.com/scipy/scipy commits | Ecosyste.ms: OpenCollective

Corrected a grammatical error in the docstring of class DOP853

68a212767139e3ac5d19c6dbce7ad2fe27d6b472 authored over 1 year ago

API: Change addnewdocs import and remove NINF (#19045)

[skip ci]

5430851fd0a7bc032ba983a174a155bbb945ad6e authored over 1 year ago

MAINT: replace `optparse` usage with `argparse` (#19030)

[skip ci]

d98afeae0fcb2302d0f25ba561e7984d5fadf65c authored over 1 year ago

MAINT: Fix codespaces setup.sh script (#19033)

A change in how codespaces is configured upstream causes the installation script for micromamba ...

7e7d8679269287564bb0c4bdf2b8da34a89592da authored over 1 year ago

Merge pull request #19027 from rgommers/rename-setuppy

BLD: rename `setup.py` to `_setup.py` to signal it should no longer be used

fe05d2e6c36c46d0afddba9f10f715979a5b7fd8 authored over 1 year ago

BLD: rename `setup.py` to `_setup.py` to signal it should no longer be used

See the added code comment in this commit for rationale of keeping `_setup.py`
around. We got an...

e8d73fa4741be67dd4329f56f400e45fd37f3fc1 authored over 1 year ago

Merge pull request #19025 from TLeitzbach/correctly_pass_xrtol_optimize

BUG: pass unused xrtol in fmin_bfgs to _minimize_bfgs

8adb5e9ece1e352e5dfb277c043eaafd212c074b authored over 1 year ago

DEP: interpolate: improve deprecation of private modules named without underscore prefix (#18992)

also change `_sub_module_deprecation` to look in multiple private modules for `__all__`

Co-au...

40e8ed45236575f08b526b94fa36d0bbeb60a8e0 authored over 1 year ago

TST: use `torch.empty(0)` to save memory

[skip ci]

5c6ad1147432aae900f0472b6a1a2b1334a4a132 authored over 1 year ago

Merge branch 'main' into array_api_decorators

c66095c55fd5a27892cb594971ede070351b9516 authored over 1 year ago

MAINT: copy, array-api compatible utility function (#19014)

* MAINT: copy, array-api compatible utility function

ef734234439d34038796baf67a718035b4979225 authored over 1 year ago

BUG: make Bessel-roots function not hang and not skip roots (#18859)

The fix consists of adding a better initial guess for every new root
computed. The initial gues...

e2359594322e2501496d07288810ca9878c977c9 authored over 1 year ago

Merge pull request #19012 from mdhaber/gh19009

DOC: stats.mannwhitneyu: address apparent sign inconsistency in alternative hypotheses

942b26f1a96a0464501103aaba998730a2d6f37c authored over 1 year ago

Merge branch 'main' into correctly_pass_xrtol_optimize

fc2748e4c27e9bd1871f8b300129f519832bb17b authored over 1 year ago

TST: fix torch device check in `skip_if_array_api_gpu`

[skip cirrus] [skip circle]

c097eddf45308fcc8bb47e06cd3d4c0ba3e93e32 authored over 1 year ago

BUG: pass unused xrtol in fmin_bfgs to _minimize_bfgs

5fa2afe0791cb20520e6aadfb793c38fb6026fb3 authored over 1 year ago

Merge pull request #19015 from mtsokol/update-np-exceptions-imports

ENH: Update numpy exceptions imports

0cec3111f825019598a28b9a03858866d6908d39 authored over 1 year ago

TST: cluster: change class-level GPU skips to function-level

[skip cirrus] [skip circle]

1d1406d5aed5fdcf2bac160008b017baad6f9ecf authored over 1 year ago

MAINT/CI: remove Mypy `type: ignore`

360a534df80f0155939a6efc0820dc572624d58a authored over 1 year ago

ENH: stats: add nonparametric one-sample quantile test and CI (#12680)

* mwe of the function, tests added but does not work yet

* added self to contrib list"

* a...

64be173b907613a19b0a655a83139a3f286baeb6 authored over 1 year ago

TST/BUG: fix array API test skip decorators

Co-authored-by: Tyler Reddy <[email protected]>

25f3bf2d706df05a5960cfee46c10688a7d2be14 authored over 1 year ago

ENH: Jones and Faddy Skew-T distribution (#18948)

* ENH: Jones and Faddy Skew-T distribution

* remove redundant test

* Use random_state beta...

382b824de948d9cac7d43a7a5db031aae888328a authored over 1 year ago

Merge pull request #18481 from andyfaff/floaty

f78f539b4a22b5603b29b984518b804e42f4bd09 authored over 1 year ago

BUG: stats.yeojohnson: avoid overflow (#18852)

* TST: add overflow tests for stats.yeojohnson
* BUG: fix overflow in stats.yeojohnson

79b72d2c122a9e4adb2a85dc02f389eba90148cd authored over 1 year ago

API: Update numpy exceptions imports

979fa4e3bdeb3711aed188cfcbbd19d17cd52a71 authored over 1 year ago

MAINT: array_api compatible modifications [skip cirrus][skip circle]

005f9d925accdf5203be7fa0fdeb195dc4eb1a0e authored over 1 year ago

Merge pull request #19013 from gabrielthomsen/gabrielthomsen-patch-1

DOCS: Fixed typo in _fitpack2.py

30740360e63debc5cc707ace9398eadf0cf5e52a authored over 1 year ago

Merge pull request #19010 from lucascolley/doc-CI-azure

DOC/MAINT: typo: change Azure reference to Cirrus

020006d49a96ca346db536106f95f4dd771f8dfc authored over 1 year ago

Fixed typo in _fitpack2.py

Changed "of" to "or"

3ae205c2013957bdb8e428254fbc4800754dae77 authored over 1 year ago

ENH: Port scipy to use new numpy complex types (#18975)

Fixes breakage with numpy's main branch after
https://github.com/numpy/numpy/pull/24085

d1da380d8e357df1d5f8e24558f334c5593eca92 authored over 1 year ago

DOC: stats.mannwhitneyu: address apparent sign inconsistency in alternative hypotheses

[skip cirrus] [skip actions]

83c083a846dab339ee0a393ddb0a96d68167de4b authored over 1 year ago

DOC/MAINT: typo: change Azure reference to Cirrus

[skip ci]

c216e2275c5e635b22cc7c0a896116251c67dc68 authored over 1 year ago

BLD: Add venv to .gitignore (#19007)

[skip ci]

8d846f19ac89a2940faa6a356044dc12acc89ac7 authored over 1 year ago

TST: Use pytest.warns in test_geometric_discrepancy_errors

5409e0de9554131c086fc49bf41259641ffd3f7d authored over 1 year ago

MAINT: use array-api compatible coercion

5eb6dbf0ecf6985506d3379894816b0bad277939 authored over 1 year ago

CI: reduce Cirrus CI usage during wheel builds (#18999)

[skip ci]

a4ed9450b6d5c1f36495b29a0471f03b471ca8ae authored over 1 year ago

MAINT: differentiable fns respect float width

ed7ab89ba8162cb0e3b6eeca9b9df9267dcd83d2 authored over 1 year ago

MAINT: differentiable fns respect float width

ScalarFunction and VectorFunction always send the same floating point
that was used to construct ...

ddb995c3adbc999f4082cbd0ed0e9fdd2af5e8cb authored over 1 year ago

Merge pull request #18996 from mdhaber/gh18864

ENH: optimize.curve_fit: reduce overhead of lightweight memoization

e4772c8d10c4d1e902c81b4f530718259a5804c6 authored over 1 year ago

Merge pull request #18825 from dschmitz89/issue18730

BUG: make `L-BFGS-B` optimizer work with single precision gradient

b9e5e49f058011641fef06895336758bb3630565 authored over 1 year ago

BUG: Merge upstream into feature

25cdfcf4ad9372e003e6f22218f4be5ec56fba50 authored over 1 year ago

BUG: Update assert

Switched from using assert_ to using assert.

bf3bcde91393030cadf23cbdabbae87a51ecfdd9 authored over 1 year ago

DOC: Note in docstring for geometric_discrepancy

68c5c2204b33f638fc3e8f26078db97219bf194e authored over 1 year ago

CI: move the musllinux Cirrus job to GHA, optimize other jobs (#18985)

[skip ci]

c025587b9fbbabf7e6bbf10e2e7c76ae61d6395c authored over 1 year ago

Merge pull request #18687 from maurosilber/main

ENH: add support for a scalar sigma in optimize.curve_fit

113a2ae40c0886c72ab1494af067a3a1197394ff authored over 1 year ago

MAINT: _lib._util._lazywhere: correct array API compatibility issues

6e12806d59c0e0e81d872183e1cffbd17e9d78a2 authored over 1 year ago

Merge pull request #19000 from lucascolley/fft_test_basic

MAINT: fft: rename `test_numpy.py` to `test_basic.py`

[skip ci]

fe877e2f5736cca82ed7b80496ccfb3c060c44fa authored over 1 year ago

Merge branch '_lazywhere' of github.com:mdhaber/scipy into _lazywhere

61f53844cbc6ba071abaff7717e5aa2e589c6588 authored over 1 year ago

Apply suggestions from code review

[skip ci]

426aefd0f69f75e59f68379b738201a54de1c27f authored over 1 year ago

MAINT: `.git-blame-ignore-revs` updated for file rename

b67ccb12ac4a5ef1c123e5b15a083d5865e28669 authored over 1 year ago

MAINT: fft: rename `test_numpy.py` to `test_basic.py`

79099da5aefd2f76092b999823e45a6519e41005 authored over 1 year ago

TST: Tests for geometric_discrepancy

9feabefdf214cb78fbebc0493538b2648f97c982 authored over 1 year ago

DOC: Update example output in docstring for geometric_discrepancy

96848605fe3e228475bf87a104dfe304546c7d87 authored over 1 year ago

ENH: Refactor common checks out of discrepancy and geometric_discrepancy

d15b7f650de811c3c5769b22134d9ad58fd373ea authored over 1 year ago

DOC: Add plot of minimum spanning tree to docstring for geometric_discrepancy

63c08fd8f27548f25e563cfe603d08e6580c08b0 authored over 1 year ago

DOC: Clearer labels in example plots for geometric_discrepancy

[skip actions] [skip cirrus]

1f94a04c2e9f9ed01e9e39e4e296209aec84bd49 authored over 1 year ago

ENH: Mention geometric_discrepancy in module docstring

9bb5b889f7332aff7838b2c11650d1c642c202e1 authored over 1 year ago

DOC: Correctly use RNG seed in examples for geometric_discrepancy

[skip actions] [skip cirrus]

c06f4a7915050d9e374b281b82c492a60a34728d authored over 1 year ago

ENH: Geometric quality measures for random sampling

cb86711c54f384a3352f833dd3f4b488bbc41adc authored over 1 year ago

add noexcept to cython optimize docs

a2ff9e89eb3dd79bef0f6c3b56e3a3e0bf56872e authored over 1 year ago

DOC: stats.lognorm: add example of the relationship between norm and lognorm (#18995)

baf7f2e3e53edd60db43d40a404bf1f74bf2621a authored over 1 year ago

ENH: optimize.differential_evolution: pass intermediate_result to callback (#18742)

* ENH: optimize.differential_evolution: pass intermediate_result to callback

---------

Co-...

08602b5a88f8cf66fea72013b7954b7f331276ba authored over 1 year ago

STY: optimize.curve_fit: improve readability of memoization logic

3e379e013a6d5672c366b9e26a37e8e2c5ef8ec6 authored over 1 year ago

ENH: optimize.curve_fit: reduce overhead of lightweight memoization

a83c648586106130567a92c6cb2a07e409908acf authored over 1 year ago

MAINT: use pytest.mark.parametrize instead of for-loop

Co-authored-by: Daniel Schmitz <[email protected]>

71e3f870296858d35c57c1e2d178d06a397a02ff authored over 1 year ago

Merge pull request #18991 from andyfaff/bfgs

DOC: fix docstring for bfgs. Closes #18989

739f705bf6700c46b7b84833e80bf48b9d35114c authored over 1 year ago

DOC: fix docstring for bfgs [skip cirrus]

3e55e2dbde9d2c819de0c3a59da292da0af610de authored over 1 year ago

DEP: integrate: improve deprecation of private modules named without underscore prefix (#18970)

also alphabetize PRIVATE_BUT_PRESENT_MODULES

604e7a28e145dd14b77666752b65879bb73b01d7 authored over 1 year ago

DEP: linalg: deprecate postional args for eigh/eigvalsh (#18946)

d81a72be76ec693aa5863386df66491641f3ad9c authored over 1 year ago

DEP: sparse.linalg: deprecate positional arguments for gcrotmk, lgmres, minres, tfqmr (#18943)

* DEP: sparse.linalg: deprecate positional arugments for gcrotmk, lgmres,
minres, tfqmr

also...

6476f8aecc75a250164ddc68d9969bac838afb96 authored over 1 year ago

ENH: Add Rotation.approx_equal method (#17460)

* ENH: Rotation rotation_to, angle_to, and approx_equal functions

* Code review comments

*...

f42ef0be9d87ae2a98ee14d03c2ccfed22b6fa4e authored over 1 year ago

ENH: optimize._differentiate: numerical differentiation of elementwise functions (#18811)

* ENH: optimize._differentiate: add function for numerical differentiation

* TST: optimize._d...

9e3f5fde7295cdba2c06f7e8fcaac34626a96000 authored over 1 year ago

DEP: optimize: improve deprecation of private modules named without underscore prefix (#18968)

* DEP: optimize: improve deprecation of private modules named without underscore prefix

218f6e40ef64ba101172fafa130b87b611434467 authored over 1 year ago

MAINT/DOC: spatial: Document and test the double cover property for Rotation quaternions (#18955)

* Document and test the double cover property for quaternions

897d811c616ec380df4000e117034e0c4cb2815c authored over 1 year ago

MAINT: refactor PyArray usages (#18967)

[skip ci]

6c00b00f915cc91ab15e8ab012582099d19df961 authored over 1 year ago

Merge pull request #18973 from ev-br/stray_np_cast

MAINT: linalg: remove a stray np.cast

73c8d7bd342383195ecde82c997cfaff7897c415 authored over 1 year ago

MAINT: linalg: remove a stray np.cast

a0a3de34c471db175e5cf9b0e6c4cfb846e0b15c authored over 1 year ago

ENH: stats.gausshyper.pdf: simplify implementation (#18799)

* ENH: stats.gausshyper.pdf: simplify implementation

42224e89fe4b0eecef866d7e57dd9312b42e289c authored over 1 year ago

DOC: improve comments about implemented change

5df3be2b84235653b8ffaf8da0e4e0aa1e406edf authored over 1 year ago

TST: return single precision objective and gradient

552dd33e6d6cee8a7b8b44226f2a988741afb58a authored over 1 year ago

Merge branch 'main' into HEAD

3a1fb21cfed7a2d3f8b833f3532527ddbeed9f9a authored over 1 year ago

MAINT: Remove `._is_array` since there's now: `isinstance(x, sparray)` (#18952)

31d8948250aaa3c67df77b237d4126592343a6e6 authored over 1 year ago

Update name of coverage action (#18962)

0aa5aa9e78f81493f1cd9f6fc149a0bb856c2e11 authored over 1 year ago

DOC: Fix installation instructions using venv/pip (#18961)

fa5455822ee83870289acb89a859c73be8a4d911 authored over 1 year ago

CI: Change OpenBLAS nightly wheel location (#18942)

e4e92cf4c573187e3c5064bcb2c242edb799b771 authored over 1 year ago

Merge pull request #18959 from j-bowhay/revert

Revert "DEP: make import scipy.stats.stats raise a deprecation warning"

81ccb98559917df8d7704c31218da936e7b83f1e authored over 1 year ago

Revert "DEP: make import scipy.stats.stats raise a deprecation warning"

This reverts commit d93b3bd4b62715e2a88f7d9ad54b6d86b63052d6.

90ad1a7ca97958873d1b29d49b7de6d4e71d1812 authored over 1 year ago

DEP: make import scipy.stats.stats raise a deprecation warning

d93b3bd4b62715e2a88f7d9ad54b6d86b63052d6 authored over 1 year ago

Merge pull request #18958 from mdhaber/gh18953

MAINT: optimize.differential_evolution: clarify that bounds must be finite

f37e08fcdc8d8b1f51596fd49bb43d590f1e707a authored over 1 year ago

MAINT: optimize.differential_evolution: clarify that bounds must be finite

aa043b9e3c625e5c29da1a9ed12c8b6d3826f610 authored over 1 year ago

BUG: trust-constr Bounds exclusive

Closes #15093
The scipy docs define Bounds as inclusive but trust-constr treats
bounds as exclusi...

935a391f877565f2e1dad66b8349b1fa3b5d34f3 authored over 1 year ago

ENH: Add the __pow__ operator for Rotations (#17452)

Co-authored-by: Scott Shambaugh <[email protected]>

b9456ac44a0e05d80183adf80284a65763c9657f authored over 1 year ago

DOC: stats.FitResult.plot: add example (#18949)

Co-authored-by: Matt Haberland <[email protected]>
Co-authored-by: Pamphile Roy <roy.pamphil...

e6c88c00a67ccb3a1bb3f846e83bf839a6eaa5a1 authored over 1 year ago

DEP: stats: improve deprecation of private modules that lack underscore (#18916)

* DEP: stats: improve deprecation of private modules that lack underscore
* DEP: correct messag...

32220e97f8a69f4e1a82f65219ad553e5d7ef1d5 authored over 1 year ago

Merge pull request #18931 from dschmitz89/vonmises_test_cleanup

MAINT: cleanup redundant tests for `vonmises.fit`

5538605e76645a43d2570aed3b9fb5bf16a5e75b authored over 1 year ago

Merge pull request #18609 from dschult/nonl_isspmatrix

TST: update nonlin tests for sparse arrays

b5e02b70c9b49d8b6283542be8786f0cdd734f2a authored over 1 year ago

DEP: deprecate positional arguments for special.comb (#18933)

dbc2f1c3e226a285f898c3b5957a11bd9335e138 authored over 1 year ago

switch allclose test idiom to np.testing.assert_allclose

67b2b6dc2a39350d5d66d23d8f560d5a0b9536c9 authored over 1 year ago

TST: _lib._util._lazywhere: add test

3f3b9f74da8b72559a2303d62018996c2b41579d authored over 1 year ago

Merge pull request #18941 from rgommers/fix-setuppy-job

CI: fix issue with the last setup.py based job, due to Cython 3.0

57c5cc9d61ff260e8c8546bbdcc23fc8954571f5 authored over 1 year ago