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github.com/westpa/westpa

WESTPA: The Weighted Ensemble Simulation Toolkit with Parallelization and Analysis
https://github.com/westpa/westpa

[pre-commit.ci] pre-commit autoupdate

pre-commit-ci[bot] opened this pull request about 1 year ago
Documentation typo fixes

jeremyleung521 opened this pull request about 1 year ago
Unpin pytables version requirement for python=3.8

jeremyleung521 opened this pull request about 1 year ago
[pre-commit.ci] pre-commit autoupdate

pre-commit-ci[bot] opened this pull request about 1 year ago
[pre-commit.ci] pre-commit autoupdate

pre-commit-ci[bot] opened this pull request about 1 year ago
MAB bin boundary output to text file

jeremyleung521 opened this pull request about 1 year ago
add pytest-timeout as an optional dependency

jeremyleung521 opened this pull request about 1 year ago
Python 3.12 Testing

jeremyleung521 opened this pull request about 1 year ago
[pre-commit.ci] pre-commit autoupdate

pre-commit-ci[bot] opened this pull request about 1 year ago
Pushing Develop changes to westpa2

jeremyleung521 opened this pull request over 1 year ago
Pinning Pytables to < 3.9 for python <3.9

jeremyleung521 opened this pull request over 1 year ago
PyTables Dropping Python 3.8 Support.

jeremyleung521 opened this issue over 1 year ago
Pinning Cython <3.0.3 for Python <3.10

jeremyleung521 opened this pull request over 1 year ago
Cythonization Fails in Python <=3.9

jeremyleung521 opened this issue over 1 year ago
Push to PyPI/Test-PyPI without secrets

jeremyleung521 opened this pull request over 1 year ago
Bump actions/checkout from 3 to 4

dependabot[bot] opened this pull request over 1 year ago
Bump pypa/cibuildwheel from 2.15.0 to 2.16.1

dependabot[bot] opened this pull request over 1 year ago
Pushing Develop changes into westpa2

jeremyleung521 opened this pull request over 1 year ago
add check for hdf5 where formats can be both topology and traj

jeremyleung521 opened this pull request over 1 year ago
[pre-commit.ci] pre-commit autoupdate

pre-commit-ci[bot] opened this pull request over 1 year ago
Bump pypa/cibuildwheel from 2.14.1 to 2.15.0

dependabot[bot] opened this pull request over 1 year ago
update w_truncate page

jeremyleung521 opened this pull request over 1 year ago
mark shutdown tests as flaky for macos

jeremyleung521 opened this pull request over 1 year ago
Pushing recent `develop` changes to `westpa2`

jeremyleung521 opened this pull request over 1 year ago
Pre commit version autoupdate

jeremyleung521 opened this pull request over 1 year ago
Update westpa2 branch with newest changes

jeremyleung521 opened this pull request over 1 year ago
Update sphinx doc configs

jeremyleung521 opened this pull request over 1 year ago
Add MacOS Tests to GH Actions

jeremyleung521 opened this pull request over 1 year ago
Fix for istate_futures race condition

jeremyleung521 opened this pull request over 1 year ago
MAB Recycling does not wait for istate futures.

jeremyleung521 opened this issue over 1 year ago
update cibuildwheel 2.14.1, remove py3.7 wheel building

jeremyleung521 opened this pull request over 1 year ago
Bump pypa/cibuildwheel from 2.13.1 to 2.14.1

dependabot[bot] opened this pull request over 1 year ago
v2022.05 release

jeremyleung521 opened this pull request over 1 year ago
Allow GH Actions to build wheels for python 3.11

jeremyleung521 opened this pull request over 1 year ago
Prep for v2022.05 release

jeremyleung521 opened this pull request over 1 year ago
Lower smallest allowed weight default

jeremyleung521 opened this pull request over 1 year ago
GH Actions workflow update

jeremyleung521 opened this pull request over 1 year ago
Fix Cython3 bug

jeremyleung521 opened this pull request over 1 year ago
Cython 3 breaks cythonization of _reweight.pyx

jeremyleung521 opened this issue over 1 year ago
Merging develop changes into westpa2

jeremyleung521 opened this pull request over 1 year ago
Preliminary Code Cleanup for westpa3

jeremyleung521 opened this pull request over 1 year ago
Bump pypa/cibuildwheel from 2.13.0 to 2.13.1

dependabot[bot] opened this pull request over 1 year ago
w_truncate CLI option to specify H5 filename

jeremyleung521 opened this pull request over 1 year ago
allow npy_loader to load pickled npy files

jeremyleung521 opened this pull request over 1 year ago
Remove MABSimManager and BinlessSimManager

jpthompson17 opened this pull request over 1 year ago
Remove MABDriver and BinlessDriver

jpthompson17 opened this pull request over 1 year ago
Bump pypa/cibuildwheel from 2.12.3 to 2.13.0

dependabot[bot] opened this pull request over 1 year ago
RC fixes

SHZ66 opened this pull request over 1 year ago
Pushing CI build fixes to westpa2

jeremyleung521 opened this pull request over 1 year ago
Build-CI fix

jeremyleung521 opened this pull request over 1 year ago
Bump pypa/cibuildwheel from 2.12.1 to 2.12.3

dependabot[bot] opened this pull request over 1 year ago
Pushing develop changes to westpa2

jeremyleung521 opened this pull request over 1 year ago
Error in link.

rcrehuet opened this issue over 1 year ago
ISTATE_DTYPE backwards compat with w_multi_west

jeremyleung521 opened this pull request over 1 year ago
Bump pypa/cibuildwheel from 2.12.0 to 2.12.1

dependabot[bot] opened this pull request almost 2 years ago
Allowing the Run class to access wtg_parents

SHZ66 opened this pull request almost 2 years ago
Bug fix to data manager when getting a subset of the segments

SHZ66 opened this pull request almost 2 years ago
Fixed a bug in the MAB scheme code when skip is None

SHZ66 opened this pull request almost 2 years ago
Make DataManager use its own rc instead of the global one

SHZ66 opened this pull request almost 2 years ago
Make DataManager use its own rc instead of the global one

SHZ66 opened this pull request almost 2 years ago
Push develop to westpa2

jeremyleung521 opened this pull request almost 2 years ago
update versioneer to v0.28

jeremyleung521 opened this pull request almost 2 years ago
Bump pypa/cibuildwheel from 2.11.4 to 2.12.0 (#297)

jeremyleung521 opened this pull request almost 2 years ago
Bump pypa/cibuildwheel from 2.11.4 to 2.12.0

dependabot[bot] opened this pull request almost 2 years ago
fix w_multi_west istate ids

jeremyleung521 opened this pull request almost 2 years ago
HOTFIX: w_multi_west istates logic

jeremyleung521 opened this pull request almost 2 years ago
Feature Request: Speeding up the HDF5 Framework

jeremyleung521 opened this issue almost 2 years ago
Duplicate data loader error #115 fix

jeremyleung521 opened this pull request almost 2 years ago
Move All CI tests to Mamba Forge

jeremyleung521 opened this pull request almost 2 years ago
Merging Develop Changes to westpa2

jeremyleung521 opened this pull request almost 2 years ago
plothist doesn't work when setting pcoord_len=1 in west.cfg

razvanmarinescu opened this issue almost 2 years ago
removed np.float, np.bool, np.int due to removal in numpy 1.24

jeremyleung521 opened this pull request about 2 years ago
Bump pypa/cibuildwheel from 2.11.2 to 2.11.4

dependabot[bot] opened this pull request about 2 years ago
CVE-2007-4559 Patch (Develop Branch)

jeremyleung521 opened this pull request about 2 years ago
CVE-2007-4559 Patch

TrellixVulnTeam opened this pull request about 2 years ago
Combine ibstates dataset in w_multi_west

jeremyleung521 opened this pull request about 2 years ago
PR to fix merge conflict issues (#282).

jeremyleung521 opened this pull request about 2 years ago
Merging develop into westpa2

jeremyleung521 opened this pull request about 2 years ago
Bump pypa/cibuildwheel from 2.11.1 to 2.11.2 (Develop Branch)

jeremyleung521 opened this pull request about 2 years ago
Installation instructions for Python 3.11

jeremyleung521 opened this issue about 2 years ago
Bump pypa/cibuildwheel from 2.11.1 to 2.11.2

dependabot[bot] opened this pull request about 2 years ago
develop/westpa2 merge conflict

jeremyleung521 opened this pull request about 2 years ago
Fix develop/westpa2 merge conflict

jeremyleung521 opened this pull request about 2 years ago
Merging develop into westpa2

jeremyleung521 opened this pull request about 2 years ago
PRs to develop no longer trigger build workflow

jeremyleung521 opened this pull request about 2 years ago
Add creation of a per-segment trajectory dataset to HDF5 framework

jdrusso opened this pull request about 2 years ago
Automating PyPI publishing

jeremyleung521 opened this pull request about 2 years ago
modify westpa.analysis's hardcoded bytestring decode to h5io.tostr

jeremyleung521 opened this pull request about 2 years ago
Ray demo

jdrusso opened this pull request about 2 years ago
Hot Fix for #269 + GH Action CI Fixes

jeremyleung521 opened this pull request over 2 years ago
Fix to recycling events reporting undercounting

jeremyleung521 opened this pull request over 2 years ago
Deprecation Warning and other documentation fixes

jeremyleung521 opened this pull request over 2 years ago
Pushing develop changes to westpa2

jeremyleung521 opened this pull request over 2 years ago
update versioneer to 0.23 to work with PEP660/setuptools 64

jeremyleung521 opened this pull request over 2 years ago
Update README.rst

jeremyleung521 opened this pull request over 2 years ago
addition of new data loaders

jeremyleung521 opened this pull request over 2 years ago
w_assign fix for newest pyyaml version load() function deprecation

darianyang opened this pull request over 2 years ago
fix for newest pyyaml version load() function deprecation

darianyang opened this pull request over 2 years ago
2022.02 release

jeremyleung521 opened this pull request over 2 years ago
Complete rewrite of weight min/max threshold portions of resampler

jeremyleung521 opened this pull request over 2 years ago