SageMath commits | Ecosyste.ms: OpenCollective

.github/workflows/macos.yml: Pass inputs.extra_sage_packages to tox

github.com/sagemath/sage - 2165bef51e682d8eeb80e85a6db1ea340b9d202f authored 10 months ago by Matthias Koeppe <[email protected]>

build/pkgs/dsdp/spkg-install.in: Increase verbosity

github.com/sagemath/sage - 1f2d9f9fbf26a1b4a11dd74de297c4c797b09359 authored 10 months ago by Matthias Koeppe <[email protected]>

.github/workflows/macos.yml: Remove failing test of macos-14-minimal

github.com/sagemath/sage - 5f4e0fed9740e250011e98934a52825918a3a546 authored 10 months ago by Matthias Koeppe <[email protected]>

.github/workflows/ci-macos.yml (dist): Do not use tag to bump the version

github.com/sagemath/sage - d26937b53e15b786cacb770b9b5f59a8cd164ef2 authored 10 months ago by Matthias Koeppe <[email protected]>

.github/workflows/macos.yml: Use tox via 'pipx run'

github.com/sagemath/sage - 700a93973230b7a6a66a97258acb5b53ec22e91b authored 10 months ago by Matthias Koeppe <[email protected]>

.github/workflows/macos.yml: Add input 'timeout'

github.com/sagemath/sage - 50d1eafe5e7f54485db7eda6ee7d4ac6fe0b7fe2 authored 10 months ago by Matthias Koeppe <[email protected]>

.github/workflows/ci-macos.yml (local-nohomebrew): Increase SAGE_NUM_THREADS to 6

github.com/sagemath/sage - 7b1d6c927b3f9f4648861f117c6f3b4d6f116661 authored 10 months ago by Matthias Koeppe <[email protected]>

.github/workflows/ci-macos.yml: Set timeout for stage 1 to 4 hours

github.com/sagemath/sage - c8ee8e7bacda9d42cf9e07752a2e82591fe013c2 authored 10 months ago by Matthias Koeppe <[email protected]>

.github/workflows/ci-macos.yml (local-nohomebrew): Also test on M1

github.com/sagemath/sage - 9d924c85ac866e9c55393387825d89b620d69c7c authored 10 months ago by Matthias Koeppe <[email protected]>

.github/workflows/ci-macos.yml (local-nohomebrew): Add self-destruct sequence

github.com/sagemath/sage - c885e540527e51de7fc9b5e9c45bf02bfc644ffb authored 10 months ago by Matthias Koeppe <[email protected]>

.github/workflows/macos.yml: Increase SAGE_NUM_THREADS to 6

github.com/sagemath/sage - 6b7c9a6e631209ca1e12f231405e416bcc659ec1 authored 10 months ago by Matthias Koeppe <[email protected]>

.github/workflows/macos.yml: Use pipx to install tox

github.com/sagemath/sage - 52654ea586f0d30d7906cca63acf0d4e20f27ef0 authored 10 months ago by Matthias Koeppe <[email protected]>

.github/workflows/macos.yml: Install tox from PyPI, not homebrew

github.com/sagemath/sage - f4e2aff3b15b097659dd31d476e33680f673a50f authored 10 months ago by Matthias Koeppe <[email protected]>

.github/workflows/macos.yml: Add tests on M1 runners

github.com/sagemath/sage - 15193b35c9a5bfb48b9cea9daf434bcaefb2f4fb authored 10 months ago by Matthias Koeppe <[email protected]>

tox.ini (local-conda): Use 'uname -m' to determine arch for installer

github.com/sagemath/sage - 49fdc95bd06330f64d8ec68743428b21bedce011 authored 10 months ago by Matthias Koeppe <[email protected]>

src/bin/sage-env [macOS]: Detect ld-classic when full XCode is in use

github.com/sagemath/sage - 628c21958cff440cbf5cdb5753c2d8d94d0439b6 authored 10 months ago by Matthias Koeppe <[email protected]>

src/bin/sage-env: Do not set the ld-classic flag when LD is set

github.com/sagemath/sage - d47f1001c97bb7135733b0a4ada32772f0b1dc5c authored 10 months ago by Matthias Koeppe <[email protected]>

pkgs/sage-conf: Make 'python3 -m sage_conf' work like 'sage-config'

github.com/sagemath/sage - c451ea4ac68231e0776756a4e80520abe0533dab authored 10 months ago by Matthias Koeppe <[email protected]>

README.md: Expand section 'Alternative Installation using PyPI'

github.com/sagemath/sage - 41ad0b5537b229365eec3feb47434c13b724e2c9 authored 10 months ago by Matthias Koeppe <[email protected]>

Updated SageMath version to 10.3.rc0

github.com/sagemath/sage - acbe15dcd87085d4fa177705ec01107b53a026ef authored 10 months ago by Release Manager <[email protected]>

src/index.html: Restore lost dot

github.com/sagemath/website - 48d6786978875736ad9ceab206ee8af237881ceb authored 10 months ago by Matthias Koeppe <[email protected]>

Remove links to dead planet

github.com/sagemath/website - 0697997ed665a8497b55506b66eaf683c2a51ac7 authored 10 months ago by Matthias Koeppe <[email protected]>

Make any_root deterministic for char 0 fields

github.com/sagemath/sage - db3ecc42dd07df0b54761885ae10760df4974852 authored 10 months ago by Giacomo Pope <[email protected]>

Merge branch 'fix_any_root_extension' of https://github.com/GiacomoPope/sage into fix_any_root_extension

github.com/sagemath/sage - c8e74646824db51888f95ea18d5e4d1ae6e32f51 authored 10 months ago by Giacomo Pope <[email protected]>

Better error handling

github.com/sagemath/sage - 030ce6df2dd8140947b8181c1f7a664a91a5bf4d authored 10 months ago by Giacomo Pope <[email protected]>

Apply suggestions from code review

Co-authored-by: grhkm21 <[email protected]>

github.com/sagemath/sage - a7bdc3e85895038a5ca32b38e86c75d0a20e5d6b authored 10 months ago by Giacomo Pope <[email protected]>

review comments

github.com/sagemath/sage - 7a61d6abc8f9f3aa40a237b14e31e71a3089a1c8 authored 10 months ago by Giacomo Pope <[email protected]>

fix issue 37445

github.com/sagemath/sage - 2ce4dddbd612b3c1322a29505305a49e48b1aa2f authored 10 months ago by Giacomo Pope <[email protected]>

Use f.roots() instead of f.any_root() when working with extensions

github.com/sagemath/sage - 09bcfdd23505651eadcbec7ca129d89d516afc6d authored 10 months ago by Giacomo Pope <[email protected]>

Slightly more intelligent way to find correct degree irr

github.com/sagemath/sage - 2569e61c6a71c168e9287c963e983855092d888e authored 10 months ago by Giacomo Pope <[email protected]>

linter

github.com/sagemath/sage - e3b12dd5a0bc2de3e170e241c414013d07ec2a57 authored 10 months ago by Giacomo Pope <[email protected]>

Replace comment

github.com/sagemath/sage - 38e93a51a57cc6bbc914e9ed8e30a8dcf0946adf authored 10 months ago by Giacomo Pope <[email protected]>

Try and speed up any_root

github.com/sagemath/sage - 732d3b370ba11d101a811f1c89d4dbc3e46ff1fc authored 10 months ago by Giacomo Pope <[email protected]>

gh-37410: minor fixes in sandpiles

Just fixing a few `ruff` warnings in the two modified files, plus some
`pep8` code formatting.

...

github.com/sagemath/sage - 0fb793fa91a0b46de452036b521cbbaeee878340 authored 10 months ago by Release Manager <[email protected]>

gh-37405: links for errors in doc of groups

just adding a few link to python standard errors in the doc of `groups`
folder

### :memo: C...

github.com/sagemath/sage - 57d4e09af50c64255869a42d155d776a9a050065 authored 10 months ago by Release Manager <[email protected]>

gh-37398: fix `relabel` for permutation groups

Fixes #37379.

### :memo: Checklist

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github.com/sagemath/sage - 6030e58afa0255901b95bd2cf52b9c96eb26d3e0 authored 10 months ago by Release Manager <[email protected]>

gh-37397: fix some ruff suggestions in cluster_algebra_quiver

this was scripted using `ruff` for the codes `UP` and `C4` in the
cluster folder.

Plus a fe...

github.com/sagemath/sage - 5bda2e23eb23e6e271e2e14b134299c65ce9d404 authored 10 months ago by Release Manager <[email protected]>

gh-37385: Remove some last traces of Trac

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github.com/sagemath/sage - ccd3f8b852e69cd52700279f464f0113f805f2c0 authored 10 months ago by Release Manager <[email protected]>

gh-37376: src/sage/rings/polynomial: Link to spkg page by label

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github.com/sagemath/sage - 64b991ab0df89f31397dd017fd6b65fc07e27ed8 authored 10 months ago by Release Manager <[email protected]>

gh-37375: Speed up square matrix times vector over GF(2)

When doing a matrix-times-vector multiplication over F_2, there is some
inefficiency caused ...

github.com/sagemath/sage - e01a43801760a4fc251b268ca1d8b736fd918dac authored 10 months ago by Release Manager <[email protected]>

gh-37367: improve random sampling of quotient-ring elements

Currently, random sampling in generic quotient rings is restricted to a
very small (and spec...

github.com/sagemath/sage - 193e49d6742d0d0171279b05a2c37ab8f5d01835 authored 10 months ago by Release Manager <[email protected]>

gh-37366: use Parent in skew polynomials

instead of the auld-class `Ring`

### :memo: Checklist

- [x] The title is concise, informat...

github.com/sagemath/sage - 702e32f43f9bb559de0a111b7614720382ac31ae authored 10 months ago by Release Manager <[email protected]>

gh-37360: Fix doctest for `multiplication_by_m`

The current doctest can create a singular curve, for example with
`random-seed=1299794029930...

github.com/sagemath/sage - 3ffb70a0d5ab860c3f8cfbcde60d5825878318c2 authored 10 months ago by Release Manager <[email protected]>

gh-37355: less usage of method .is_commutative

changing a few calls of `R.is_commutative()` for rings, in favour of the
syntax `R in Commut...

github.com/sagemath/sage - f5983a3c510e1d836c4c3fd1312cc74972f32090 authored 10 months ago by Release Manager <[email protected]>

gh-37354: Allow submodule construction of a free module over a ring

This fails
```sage
sage: R.<x,y> = QQ[]
sage: S = R.quotient([x*y])
sage: M = FreeModule(S, ...

github.com/sagemath/sage - 218012299eb59b6c234c31d7db24ffc561635b7d authored 10 months ago by Release Manager <[email protected]>

gh-37352: `sage --package create`: When re-creating with a different source type, clean up

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github.com/sagemath/sage - 686f7e9a362393c3730fc59eeeaa3251446b7ee0 authored 10 months ago by Release Manager <[email protected]>

gh-37350: `sage -package dependencies`

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github.com/sagemath/sage - 0df697a0a2de28a7ae5f9e5fdc654b4e3c02a818 authored 10 months ago by Release Manager <[email protected]>

gh-37343: Add simple methods to convert to and from bytes for `ZZ` and finite fields

I often have to work with the conversion of bytes / integers and
currently do this by workin...

github.com/sagemath/sage - fba0587aa94e66ecb9c7bd553d58f1ee0d8ca1a5 authored 10 months ago by Release Manager <[email protected]>

gh-37342: remove some old deprecations in functional.py

remove functions deprecated in late 2021

in #32347

### :memo: Checklist

- [x] The title i...

github.com/sagemath/sage - 805c1522b87b852e98ec47d96263f0640185dd89 authored 10 months ago by Release Manager <[email protected]>

gh-37341: Avoid algebra in polynomials

One avoids using `Algebra` and `CommutativeAlgebra` in the polynomial
classes.

And the gene...

github.com/sagemath/sage - a451b65a356b36ec67a4dcd02df2a421df3ac0d1 authored 10 months ago by Release Manager <[email protected]>

gh-37339: Removed whitespaces in `ncsym.py`

Removed the whitespaces in `ncsym.py`, which currently cause all PR
tests to fail at Lint.
...

github.com/sagemath/sage - 57a404ca7ae1525129f1d6e45a97eadb7c841002 authored 10 months ago by Release Manager <[email protected]>

gh-37338: Speedup database_matroids.py tests

I strategically recast a few matroids in `database_matroids.py` to
`CircuitsMatroid`s (given...

github.com/sagemath/sage - ec7b486614b0f696a509f1f872bdf5693fa4660a authored 10 months ago by Release Manager <[email protected]>

gh-37334: Preparation for Sphinx 7

Based on #37129, we adjust sage for Sphinx 7. Mainly,

- (once again) `sage_autodoc` is upda...

github.com/sagemath/sage - 0f35a6911dc39bd51464b1b914d857d9aa2a9ab7 authored 10 months ago by Release Manager <[email protected]>

gh-37333: fixing ruff UP037 (about type annotation)

namely, quotes are no longer needed around type annotations

this only appeared in two files...

github.com/sagemath/sage - e2c3fe9998e522bce72a29608b2915bdd616b88f authored 10 months ago by Release Manager <[email protected]>

gh-37329: add optional order= argument to .log() method for PARI finite-field elements

When the order of the base element of a finite-field logarithm is
already known, factoring t...

github.com/sagemath/sage - 34de9761f254025283a47a9695a08a18cd182f5f authored 10 months ago by Release Manager <[email protected]>

gh-37328: remove "known bug" marker for #6413 from doctest

The long-standing issue #6413 was resolved in #37096, but there is still
one `# known bug` m...

github.com/sagemath/sage - 7f85dca697170ee8efab73e4ba36edafb3bde1e6 authored 10 months ago by Release Manager <[email protected]>

gh-37324: Basis completion for matrices over univariate polynomials

This PR (the fruit of discussions with @xcaruso during SageDays 125)
introduces a new functi...

github.com/sagemath/sage - 721030b1b1d83cd5961185ce139d72362bafe3ea authored 10 months ago by Release Manager <[email protected]>

gh-37318: Allowing HeckeAlgebraSymmetricGroupT to accept elements of SymmetricGroup(n) as input

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github.com/sagemath/sage - 0b38b3eac89e18d6149670c9de364f09c4211801 authored 10 months ago by Release Manager <[email protected]>

gh-37316: use CommutativeRing in ring_extension

Removing one of the last uses of `CommutativeAlgebra` class, towards its
deprecation.

Also ...

github.com/sagemath/sage - f016b015301a921edf6a05311ed97cb89c943496 authored 10 months ago by Release Manager <[email protected]>

gh-37313: Fix package install instructions in "Numerical Sage" tutorial

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github.com/sagemath/sage - e54f7eb5e14a0a4b9275881736e4024d44b4730e authored 10 months ago by Release Manager <[email protected]>

gh-37311: Add tips for choosing an exception in developer guide

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github.com/sagemath/sage - 0e819af60b8c5d856bf6d6bbd058142eb57cc41a authored 10 months ago by Release Manager <[email protected]>

gh-37306: Fix random test failures in `number_field_element_quadratic`

Fix #37296.

Add `warnings.filterwarnings` to ignore `DeprecationWarning` in the
failing doc...

github.com/sagemath/sage - c3e76e125c19faf59eab1e5cc30373929e8292a6 authored 10 months ago by Release Manager <[email protected]>

gh-37303: use Parent in Weyl algebra

replace the auld-class `Algebra` by `Parent` in Weyl algebras

this requires a tweak in the ...

github.com/sagemath/sage - c1f562581708ca0b8e9fa876bb79edc8d8ac21fb authored 10 months ago by Release Manager <[email protected]>

gh-37302: use Parent instead of Algebra in finite_gca

This is removing one usage of the auld-class `Algebra` in the modified
file

Also changing a...

github.com/sagemath/sage - 2416d61a12f0cae54263bd4457c3967e0057a78d authored 10 months ago by Release Manager <[email protected]>

gh-37299: use parent in quaternions

replace the auld-style class by `Parent` and categories for quaternion
algebras.

### :memo:...

github.com/sagemath/sage - 2e9c5754bd61dad2d0381ed71bede8e30f459a9c authored 10 months ago by Release Manager <[email protected]>

gh-37286: sagemath-standard: fix manifest

This PR fixes two issues with the manifest for sagemath-standard:

- src/MANIFEST.in: don't ...

github.com/sagemath/sage - 49881576723b0c8060980b368c6a8f0620d1767f authored 10 months ago by Release Manager <[email protected]>

gh-37283: Fix RegularSequence.subsequence for zero sequence

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github.com/sagemath/sage - 99fd4f4279459642cbdc6abc79da414e00a8c4f5 authored 10 months ago by Release Manager <[email protected]>

gh-37281: details in Zariski-Van-Kampen

Small changes in the modified files, about pep8 and ruff warnings about
code

### :memo: Che...

github.com/sagemath/sage - 9a1a9649f339cc62826ede716fef3bdaef827aa2 authored 10 months ago by Release Manager <[email protected]>

gh-37273: large pep8 cleanup in interfaces

just fixing many small code details in `interfaces` folder

### :memo: Checklist

- [x] The ...

github.com/sagemath/sage - c02dfc43a6c9835f7994c13144a8953cb3d4ac9c authored 10 months ago by Release Manager <[email protected]>

gh-37268: Allow custom degree in `random_element` of polynomial quotient ring

Currently, the `random_element` function of the polynomial quotient ring
passes all argument...

github.com/sagemath/sage - 044b3aa1638abff847adf1968a05af80187d8c7b authored 10 months ago by Release Manager <[email protected]>

gh-37260: extend `all_paths_iterator` and `all_simple_paths` to Graph

This answer a question from
https://ask.sagemath.org/question/75715/all_simple_paths-generat...

github.com/sagemath/sage - ffa87518e0ff8e5f4e543ea4e8a2edf504db0d73 authored 10 months ago by Release Manager <[email protected]>

gh-37242: Improved algorithm choice for isogeny computation

Improved the logic for algorithm choice in
`EllipticCurve_field.isogeny()`:
- if we have mul...

github.com/sagemath/sage - d4075f1979c57d8d31689467b38f00d2473e7269 authored 10 months ago by Release Manager <[email protected]>

gh-37231: Use matroid-database package

Remove matroid database files (`ext_data/matroids`) and use newly
created `matroid-database`...

github.com/sagemath/sage - 54307752f5a324450340945af1888869d5e1a135 authored 10 months ago by Release Manager <[email protected]>

gh-37227: build/pkgs/ipython/dependencies: Add matplotlib_inline

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github.com/sagemath/sage - 71f2ef44c965d953414ef9d633c351957fdd578c authored 10 months ago by Release Manager <[email protected]>

gh-37221: Added the alt nu-tamari lattices

The alt nu-Tamari lattices are a generalization of the nu-Tamari
lattices. These lattices de...

github.com/sagemath/sage - 3eac6ea28db29f150eb940f0ee004032a48d99f7 authored 10 months ago by Release Manager <[email protected]>

gh-37206: Various edits of developer guide

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github.com/sagemath/sage - abc70998ef1bed07e4bae0cdcbdc064edc4942b9 authored 10 months ago by Release Manager <[email protected]>

gh-37186: Update debian.txt for various Python packages

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github.com/sagemath/sage - 726052b07ab73f28a8115747daf02ed7a2951fe2 authored 10 months ago by Release Manager <[email protected]>

gh-37129: Sphinx 7

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github.com/sagemath/sage - bdf8f978a3ce14d32b80daf616263ff3aadb36a4 authored 10 months ago by Release Manager <[email protected]>

gh-37089: Implemented order computation and identity checking for automorphisms of elliptic curves

The WeierstrassIsomorphism class is also used to represent automorphisms
of elliptic curves....

github.com/sagemath/sage - efd42e5ab1809f7d1753eae88f6030ed7faee485 authored 10 months ago by Release Manager <[email protected]>

gh-36988: Adding support for sums, intersection, and equality of SubmodulesWithBasis

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github.com/sagemath/sage - e7037f3a0057a0fac583caa7e151f61380dc1503 authored 10 months ago by Release Manager <[email protected]>

gh-36694: CI conda: On `pull_request`, only run 1 macOS job and 1 Linux job

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github.com/sagemath/sage - eabd2bf80bc9e8f361cc060e83213c8d1e767954 authored 10 months ago by Release Manager <[email protected]>

gh-36602: Tidy PR template

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github.com/sagemath/sage - 4937796a77cb150e84a0929b1fa4b6035693d0eb authored 10 months ago by Release Manager <[email protected]>

gh-36587: Created functions to generate random k-tree and partial k-tree graphs

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github.com/sagemath/sage - 34e561800a8109fcb3c88c8a11f43cabe8afa0e8 authored 10 months ago by Release Manager <[email protected]>

gh-35103: SCIPBackend: Faster copy, remove_constraint methods

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github.com/sagemath/sage - be3a1163b6919e5d4c27618f9af2fc693263d2c2 authored 10 months ago by Release Manager <[email protected]>

tag formatting

Co-authored-by: Matthias Köppe <[email protected]>

github.com/sagemath/sage - 73b17c3a0ec7795965cd8209b9ec1ab88b2beec0 authored 10 months ago by Frédéric Chapoton <[email protected]>

tag formatting

Co-authored-by: Matthias Köppe <[email protected]>

github.com/sagemath/sage - 92aef0940e9e4f7de56b19bb03574c135d0f34c9 authored 10 months ago by Frédéric Chapoton <[email protected]>

sage --package dependencies: Fix indentation

github.com/sagemath/sage - cce885f5e639b373f45a658a78b5dd0ec464fd12 authored 10 months ago by Matthias Koeppe <[email protected]>

build/bin/sage-spkg-info: Remove last use of $SAGE_PACKAGE

github.com/sagemath/sage - 5109a5e8bea035d7a9eb717a9fc8ac5765cef0e2 authored 10 months ago by Matthias Koeppe <[email protected]>

sage --package dependencies: Support --format=rst, improve --format=plain; use in sage-spkg-info

github.com/sagemath/sage - c52a2c4642928678370d0e7bc7380eb8df54c602 authored 10 months ago by Matthias Koeppe <[email protected]>

minor fixes in sandpiles

github.com/sagemath/sage - c34387b909fae1ff7876953621fb79f5ace4d6b4 authored 10 months ago by Frédéric Chapoton <[email protected]>

Remove output blocks and new lines between input blocks

github.com/sagemath/sage - 941311b22aff9124361bb954d4fdbb26ecd173b6 authored 10 months ago by Giacomo Pope <[email protected]>

Apply suggestions from code review

Co-authored-by: Travis Scrimshaw <[email protected]>

github.com/sagemath/sage - 134d290c5e4ca63a23284c5dc3d0161f1785ab33 authored 10 months ago by Giacomo Pope <[email protected]>

Making a mess of git before morning coffee

github.com/sagemath/sage - b06f95cc0cae0c2c7b060c47a74176fcbcf8a199 authored 10 months ago by Giacomo Pope <[email protected]>

merge conflicts

github.com/sagemath/sage - 083b14067e022d9575bffcdd9affc0b4be43c639 authored 10 months ago by Giacomo Pope <[email protected]>

Docstring formatting after review

github.com/sagemath/sage - aab7c570fbac7d433cdb85b16161ec82790baa84 authored 10 months ago by Giacomo Pope <[email protected]>

links for errors in doc of groups

github.com/sagemath/sage - b967ec86879c1932a1e1a2b24089f0d442032cb3 authored 10 months ago by Frédéric Chapoton <[email protected]>

remove trailing whitespace

github.com/sagemath/sage - b3b634cf336b1a777c1e98acbfe35bd944e943e9 authored 10 months ago by dcoudert <[email protected]>

use block scope

github.com/sagemath/sage - 48482bd20c43f6d908b37836f96fb191daa14238 authored 10 months ago by dcoudert <[email protected]>

fix doctests

github.com/sagemath/sage - e7aab947d7beb206fd7cd09ef38035b24e8a89d3 authored 10 months ago by dcoudert <[email protected]>

update documentation

github.com/sagemath/sage - 0eb0812847784a0c6417a4e9780f456313ff754b authored 10 months ago by dcoudert <[email protected]>