GeomScale commits | Ecosyste.ms: OpenCollective

remove unused flags from makevars, fix error in lp_MPS.c, set version 1.0.3

github.com/GeomScale/volesti - ae10bc846f80db56e3af6ceb57bb4d5c78752f6d authored about 5 years ago by Tolis <[email protected]>

fix point == operator.

github.com/GeomScale/volesti - 93aef46ed850e5d8a4b7cf978b2a223ad644af34 authored over 5 years ago by Tolis <[email protected]>

Merge pull request #26 from TolisChal/fix_tab_sep_ine

Fix bug for ine or ext files, when the coefficients are also separated with tab.

github.com/GeomScale/volesti - 74c3a76a014715c961c927a8ebd91881a0e87f06 authored over 5 years ago by Vissarion Fisikopoulos <[email protected]>

fix bug foe ine files, when the coefficients are seperated by tab.

github.com/GeomScale/volesti - 6adde07fbad0593c4bc6e3a4debf5ce73f54807f authored over 5 years ago by tolischal <[email protected]>

Delete R documentation pdf

github.com/GeomScale/volesti - 927396ae883b65b1bd8365af8083d535ba7402cc authored over 5 years ago by Vissarion Fisikopoulos <[email protected]>

Merge pull request #24 from GeomScale/version_1.0.2

CRAN version 1.0.2 - remove rstripper and update readme in inst folder with rhub checks

github.com/GeomScale/volesti - 676cfeef0e2c29f80d267e45583fec22658194bd authored over 5 years ago by Vissarion Fisikopoulos <[email protected]>

Update NEWS.md

github.com/GeomScale/volesti - 0d639650b048da75e6222857f6a92548254dc139 authored over 5 years ago by Vissarion Fisikopoulos <[email protected]>

update NEWS file for version 1.0.2

github.com/GeomScale/volesti - ff617045cb773e503b8435b6dea769c0d5899300 authored over 5 years ago by Tolis <[email protected]>

commit the version 1.0.2 with ficed bugs and cran violations.

github.com/GeomScale/volesti - a3c140f29322646bc1566a79d37ce08a91c4862b authored over 5 years ago by Tolis <[email protected]>

Change \` with \' in COPYRIGHTS

github.com/GeomScale/volesti - 287c014839f2bc2b0dc8bd16c9fdf69976a16868 authored over 5 years ago by Vissarion Fisikopoulos <[email protected]>

remove .Rhistory file

github.com/GeomScale/volesti - c00f4cc2e17a3a90962d45fe3f9a7bc071dd1049 authored over 5 years ago by tolischal <[email protected]>

fix non-external bugs from solaris

github.com/GeomScale/volesti - 3c57114d666501999e930a9e9fc511f6329df5d9 authored over 5 years ago by tolischal <[email protected]>

new header file for rotating and fix bugs of solaris building in minimum_ellipsoid in external.

github.com/GeomScale/volesti - c028a99560fcf6ec0db9e61591026f300d0d8ca8 authored over 5 years ago by tolischal <[email protected]>

improve AUTHORS file, update documentation pdf, fix a bug in lp_solve.h for the membership of zonotope

github.com/GeomScale/volesti - 3a193c1c7082cf55ddaa1925242fa533da57038e authored over 5 years ago by tolischal <[email protected]>

add AUTHORS file in inst folder and a reference in description files. This file contains the contributors of other packages. We update the documentation

github.com/GeomScale/volesti - bcc958b1dd51cba0c7bd900ab8736a05b7dcfe7e authored over 5 years ago by Tolis <[email protected]>

Update README.md

github.com/GeomScale/gsod2019 - f49933a73d5d03cc7978d4ecaa5d6e9776174be4 authored over 5 years ago by Vissarion Fisikopoulos <[email protected]>

Initial commit

github.com/GeomScale/gsod2019 - f3b06c6c14e53e6800abaceffa0769d17d7d7273 authored over 5 years ago by Vissarion Fisikopoulos <[email protected]>

generate new documentation.

github.com/GeomScale/volesti - 67fc549a2a85a88763f86c30a97690d0aa03c96d authored over 5 years ago by tolischal <[email protected]>

Fixing references in description file

github.com/GeomScale/volesti - b96bf378dc9c3ff844d5f8f1df85ff4739b0e8e7 authored over 5 years ago by Vissarion Fisikopoulos <[email protected]>

move lp_solve to externals and modify makevars and lpsolve makefile accordingly, as well as the R script grcran.R

github.com/GeomScale/volesti - ff0961fb6482044f02dc96a43e73ac5b7cf72e8c authored over 5 years ago by Tolis <[email protected]>

add COPYRIGHTS file, add copyright and modification declarations in external/minimum_ellipsoid header files.

github.com/GeomScale/volesti - 9e72f9d6571bea77a4d3a172add8771c8965facb authored over 5 years ago by tolischal <[email protected]>

edit description file to declare contributors. Change \dontrun{} with \donttest{} in Rd files and modify polytope_modules.cpp to declare copyrights.

github.com/GeomScale/volesti - 2452cce6bfddf882856df4170ec93a0dc720cc6a authored over 5 years ago by tolischal <[email protected]>

change description.

github.com/GeomScale/volesti - 5b6605d45db8ada158e1202e39f77028d5882dfb authored over 5 years ago by Tolis <[email protected]>

remove single quotes from description and change the varsion to 1.0.0

github.com/GeomScale/volesti - 9882a9a77bb26c4a6c9ed89be7ed1462f1bb7052 authored over 5 years ago by tolischal <[email protected]>

fix namespace and add innerball implementation for the intersection of two V-polytopes and modify InnerBall.cpp, sample_points.cpp and volume.cpp accordingly. Add operater == to point.h.

github.com/GeomScale/volesti - a8f767c6f58c079b82f53582ab5ee1084ba08349 authored over 5 years ago by tolischal <[email protected]>

replace Eigen::Random() in rotating.cpp. Modify the return value of rotating and rand_rotate() in order to return the matrix of the linear map as well. Use wrappers in ExtractMatPoly.h and modigy poly_gen.cpp and R generator functions accordingly. Update the documentation and add ' in mis-spells in description file to avoid the cran Notes.

github.com/GeomScale/volesti - e55802cb6bf60d2aade0c5debf572877f88a0c70 authored over 5 years ago by tolischal <[email protected]>

fix cg test for zonotopes

github.com/GeomScale/volesti - e3f9782759a35ba68c4736cd00fe36fc8b26f02c authored over 5 years ago by tolischal <[email protected]>

Fix problem with parallel build

github.com/GeomScale/volesti - 8a58067f0596ada3feb5954f10a32e0d06d08bf4 authored over 5 years ago by Vissarion Fisikopoulos <[email protected]>

Update config.yml to execute tests in parallel

github.com/GeomScale/volesti - 0baa7f50bb6f8b92dea84f0e16005b13e3af5d01 authored over 5 years ago by Vissarion Fisikopoulos <[email protected]>

relax V-poly tests

github.com/GeomScale/volesti - a1ec63897d6b0ed7a3125f599766792a97162290 authored over 5 years ago by tolischal <[email protected]>

Merge pull request #12 from GeomScale/vissarion-patch-1

Vissarion patch 1

github.com/GeomScale/volesti - c961fcdc791659da8fd0881b7b7bbb28d86e0dcc authored over 5 years ago by Vissarion Fisikopoulos <[email protected]>

Add pararellism to CI

github.com/GeomScale/volesti - cd2af103841730b6f252ef31f2676cd4971998ca authored over 5 years ago by Vissarion Fisikopoulos <[email protected]>

Merge pull request #11 from GeomScale/develop

Merge develop to master

github.com/GeomScale/volesti - 7dbf6d20f8cf329364e53e2f370a4ebcb9e3357d authored over 5 years ago by Tolis Chalkis <[email protected]>

fix c++ tests

github.com/GeomScale/volesti - bb1f8388af31881dfcc2fa386c6e5891c80c4795 authored over 5 years ago by Tolis <[email protected]>

fix tests for CG algo in H-rep.

github.com/GeomScale/volesti - 370872a596e520f67b0e85f56ab38bc565c552f6 authored over 5 years ago by tolischal <[email protected]>

update the documentation and the description file.

github.com/GeomScale/volesti - 41b393571ce965fc5592283bae6c13f500b920af authored over 5 years ago by tolischal <[email protected]>

fix c++ tests

github.com/GeomScale/volesti - b6f43828038461ebc8a12a71ca962ced66b66c3a authored over 5 years ago by tolischal <[email protected]>

fix c++ tests for cg algo.

github.com/GeomScale/volesti - e78117675e0394c41ea0fdf0298a5db4ae78bb2b authored over 5 years ago by tolischal <[email protected]>

fix urls in cran readme.md and remove cran-comments from the inst folder.

github.com/GeomScale/volesti - 42f55d5d224b406d1e99a59fee14496ca75b31ac authored over 5 years ago by tolischal <[email protected]>

modify description and update documentation

github.com/GeomScale/volesti - 2f2cb58ae75c152839606175e47a2bb85f31f1db authored over 5 years ago by Tolis <[email protected]>

update the cran version readme.

github.com/GeomScale/volesti - dff106d33e7bd01fa7d2156dfe6fd20b88f1baad authored over 5 years ago by Tolis <[email protected]>

update the cran version readme and add the cran-comments.md file into inst folder in cran package. Update fileToMatrix documentation.

github.com/GeomScale/volesti - 10a12fb1a76414d150e79921004281f63c23ef37 authored over 5 years ago by Tolis <[email protected]>

change the cran-comments.md file and add the correct date to description file.

github.com/GeomScale/volesti - 3274db555cebcdcf5baa885ca60242e790aab8ac authored over 5 years ago by Tolis <[email protected]>

fix rounding test

github.com/GeomScale/volesti - b448c185fdb8673fe681c66f82ac57877a531b03 authored over 5 years ago by Tolis <[email protected]>

fix rounding test

github.com/GeomScale/volesti - ffb5f4d1332e113f8e60ceb34e2c001b22203b93 authored over 5 years ago by Tolis <[email protected]>

disable skinny_cube_20 for rounding test

github.com/GeomScale/volesti - 035fa93fa5079efc44dca24ad0d77a6cd1ba73f6 authored over 5 years ago by tolischal <[email protected]>

Merge pull request #10 from TolisChal/R_volesti

merge improved R interface into develop

github.com/GeomScale/volesti - 19bebd1b4d55622ed7df00c4cb501a4c22d5d2b7 authored over 5 years ago by Tolis Chalkis <[email protected]>

solve a Note from the devtools::build_win(). Update the cran-comments.md in cran_gen folder.

github.com/GeomScale/volesti - 392fb3ec9023416658802bd831e755195b14c281 authored over 5 years ago by tolischal <[email protected]>

include volume.h

github.com/GeomScale/volesti - d94111d18a60e7e6cc167fed30f21fbb0f24c621 authored over 5 years ago by tolischal <[email protected]>

use var.cdhr_walk and var.rdhr_walk for the type of HnR.

github.com/GeomScale/volesti - 0a79d9f24ec35946de3134550112dcd480cb9610 authored over 5 years ago by tolischal <[email protected]>

use walk_step instead of walk_length.Update the documentation.

github.com/GeomScale/volesti - 17ca62c79fa56494b81299b4c02c6bfa9c6bb37e authored over 5 years ago by tolischal <[email protected]>

update the roxygen comments for the documentation.

github.com/GeomScale/volesti - 041d920d71b5be9e46dca2d5ab88ba0281b7d494 authored over 5 years ago by tolischal <[email protected]>

update the Rd files of the C++ classes and of the exposed classes through modules. Fix bugs in arbitrary simplex sampler. Fix bugs in examples, and in the SOB function in volume.h in cran header.

github.com/GeomScale/volesti - eae9f2797fb619391824ee1a6864870897194345 authored over 5 years ago by tolischal <[email protected]>

create Rd files for the exposed c++ classes. Use switch in poly_gen. Use break inside case:

github.com/GeomScale/volesti - 562d0d5fd13bdbe0f9688c98fc678fc2067049dc authored over 5 years ago by tolischal <[email protected]>

use std::numeric_limits::max() and lowest().

github.com/GeomScale/volesti - 73d18f4aad54fc924dcab2cc4ad93bcda8d8d989 authored over 5 years ago by Tolis <[email protected]>

use switch instead of if-else if. Enable the c++ tests.

github.com/GeomScale/volesti - 7a6cf09a5a1d1cb1c68c600706e707971892760c authored over 5 years ago by Tolis <[email protected]>

fix bug in rounding.cpp. Add Rd files by hand for polytope classes. Fix bugs from devtools::check().

github.com/GeomScale/volesti - a8aeaa6c34d7f1c4a51ffdb9f51815fde8d26377 authored over 5 years ago by tolischal <[email protected]>

add boundary oracles for V-polytopes and zonotopes that use the feasible basis from the first LP for the second one in each HnR step.

github.com/GeomScale/volesti - 750571be361178f86bd9117873bcfd109e1db9fa authored over 5 years ago by tolischal <[email protected]>

add generators for H and V random polytopes. Update the documentation and fix bugs in sample_points and exact_vol functions. Make adjustments in the test functions.

github.com/GeomScale/volesti - cdb08291600047749db5b3e9bdf68fc6d5a71c66 authored over 5 years ago by tolischal <[email protected]>

create the updated .Rd files and the pdf of the documentation

github.com/GeomScale/volesti - bc69aa2140f41527c28354c96d4ecc16fa300dae authored over 5 years ago by Tolis <[email protected]>

write the roxygen comments for the documentation. Change inputs for both R and rcpp internal functions of rounding and rotating. Change the roxygen comments accordingly.

github.com/GeomScale/volesti - 9778c240c92b62547ef9159c13fac52ac5d5a393 authored over 5 years ago by Tolis <[email protected]>

create rd files for all the rcpp functions and the polytopes modules as well. Delete temp folder.

github.com/GeomScale/volesti - 80b25c9a913ebaf628927ae95bb221ca7e87dc88 authored over 5 years ago by Tolis <[email protected]>

create rcpp funtions for exact volume computations, copulas, sliceofsimplex. Modify R functions for rounding, and random rotate.

github.com/GeomScale/volesti - e4d556a2cc5ab2bd9de3f30b9b5ced81f20be06b authored over 5 years ago by tolischal <[email protected]>

add innerball.cpp, sample_points.cpp

github.com/GeomScale/volesti - 83f51145ee3bceaf0e635d3b22451fcd848fec3b authored over 5 years ago by tolischal <[email protected]>

modify sample_points.

github.com/GeomScale/volesti - d4ce9cec166d6eedf2bb7a7873d8efe94821ad3e authored over 5 years ago by tolischal <[email protected]>

modify the generators R functions. Create rcpp function sample_points.

github.com/GeomScale/volesti - 12cafaeacaca88c380d5ae0e5725f436f5e57eb4 authored over 5 years ago by tolischal <[email protected]>

Rvolume: define the input variables, add wrappers to Rvolume function. Add modules for H,V-polytopes and zonotopes. All the exported classes have a field int 'type' in order to declare the representation of the polytope.

github.com/GeomScale/volesti - 4adc0b0f3ee93a32539a9ca80fd3c2d971c3f1c1 authored over 5 years ago by tolischal <[email protected]>

return 2d facets for inner ball in zonotopes. Shift polytope in SOB algo to origin, improve ball membership and boundary oracles.

github.com/GeomScale/volesti - 3c3696c6f7c74259f4d778c9194b735fbd93df9b authored almost 6 years ago by tolischal <[email protected]>

Update README.md

github.com/GeomScale/volesti - 645850275ace3ed1aeaa92f6632a1d2286735c33 authored almost 6 years ago by Vissarion Fisikopoulos <[email protected]>

Update README.md

github.com/GeomScale/volesti - e36b5cee7947b4f32c0ca5dc2a8ba9a6922d7667 authored almost 6 years ago by Vissarion Fisikopoulos <[email protected]>

Update README.md

github.com/GeomScale/volesti - 6ab497fe2ce8af036dbfb83851bed964bfb738e9 authored almost 6 years ago by Vissarion Fisikopoulos <[email protected]>

Merge pull request #16 from vissarion/R_volesti

Reduce if statements in Rvolume to one and fix a bug in generate points on sphere function

github.com/GeomScale/volesti - c29d4168824e523f63326425d18ba52bf636142f authored almost 6 years ago by Tolis Chalkis <[email protected]>

Merge branch 'R_volesti' of github.com:vissarion/volume_approximation into R_volesti

github.com/GeomScale/volesti - 21d4929490483cd1426b8726f71d995ae9a9b43d authored almost 6 years ago by Vissarion Fisikopoulos <[email protected]>

Add an example of volume computation

github.com/GeomScale/volesti - 5320ceccac5631fc515d6781bc3bb014d7fe3f70 authored almost 6 years ago by Vissarion Fisikopoulos <[email protected]>

Merge branch 'R_volesti' into R_volesti

github.com/GeomScale/volesti - b42ae7e32363f083cba903f8d8b0ea1455b5b4f7 authored almost 6 years ago by Vissarion Fisikopoulos <[email protected]>

Reduce if statements in Rvolume to one and fix bug in generate points on sphere function

github.com/GeomScale/volesti - b3773c3d28271054be5ff0c10bb88b7a7485bbd4 authored almost 6 years ago by Vissarion Fisikopoulos <[email protected]>

comment out te converter in Rvolume.cpp

github.com/GeomScale/volesti - 46827bedec7074d7c8df3880bb822ccb86986a03 authored about 6 years ago by tolischal <[email protected]>

add Hpolytope converter from Rcpp::Reference.

github.com/GeomScale/volesti - 26ae639a7c3f0f5b38a8c9025837131ad9ac543d authored about 6 years ago by tolischal <[email protected]>

fix example errors and logical checks in sample_points(). Fix errors in InnerBall tests.

github.com/GeomScale/volesti - f042def553d0262e1d1cd330c3f825b4e3f431e3 authored about 6 years ago by tolischal <[email protected]>

document the refClasses and update the documentation

github.com/GeomScale/volesti - dcc953b4e9454841d951dc87c9a1bb24f35444d3 authored about 6 years ago by tolischal <[email protected]>

improve document comments in Innerball.R, rand_rotate.R, round_polytope.R, sample_points.R (add references) and volume.R

github.com/GeomScale/volesti - 948166987f04a85da960a72875d6d46331e33a64 authored about 6 years ago by Tolis <[email protected]>

improve roxygen comments for the documentation.

github.com/GeomScale/volesti - a8fd340363857d40f1f03846dc10790caf50ed37 authored about 6 years ago by Tolis <[email protected]>

improve documenting in copulas, exact_vols and volume.

github.com/GeomScale/volesti - 7e9484f00eb0624cd3a30682e3ce70c8cc3bcdfb authored about 6 years ago by Tolis <[email protected]>

create new .Rd files. Improve volume roxygen comments.

github.com/GeomScale/volesti - 351069ffd525395ccc67ef78ac8c9b4f5d89a1e2 authored about 6 years ago by Tolis <[email protected]>

Add vars in a header file. Include only needed header files in all .cpp R exported functions. Make adjustments in test in order to use the new interface. Improve cran packege (included header files in .cpp, Rbuildignore).

github.com/GeomScale/volesti - 64855a7eede6e0223bc7a78019883cd02f481d43 authored about 6 years ago by Tolis <[email protected]>

add a check for the inner ball computation of a polytope that is defined by the intersection of two V-polytopes. If there less than d+1 known vertices in the intersection the computation fails and an error message is printed.

github.com/GeomScale/volesti - 78e9d7a2379e110a0da2fd78a6d58b6ad1ad8b4b authored about 6 years ago by Tolis <[email protected]>

add option in R function volume() to approximate the volume f an intersection of two V-polytoppes. We modify VPolytope() R class and develop Rcpp volume function.

github.com/GeomScale/volesti - d5570765ce3942e2a8ad1e9f833a940445421253 authored about 6 years ago by Tolis <[email protected]>

develop exact_vol() R function. Add IntersectionOfVpoly class in c++ code and RVpolyIntersection() in .cpp file which is an exported function for the volume of a polytope defined by the intersection of two V-polytopes.

github.com/GeomScale/volesti - a099a946db8333228a9ca3e3b73a1d2f999e990e authored about 6 years ago by Tolis <[email protected]>

develop R functions: copula1, copula2, InnnerBall and exact_vol()

github.com/GeomScale/volesti - b66cbe64125c2d75526443e2dc14f6439d15db83 authored about 6 years ago by tolischal <[email protected]>

develop R functions, round_polytope(), rand_rotate()

github.com/GeomScale/volesti - 1fb0dfcc0ef87cf8cad50cf51bc7b7a5e57988db authored about 6 years ago by tolischal <[email protected]>

develop sample_points() in R.

github.com/GeomScale/volesti - ff36cdef678aa1b59d338b19ba0206f1964c2f9f authored about 6 years ago by tolischal <[email protected]>

add .cpp files for copulas, rotating and exact_vols. Develop R funcctions: volume, GenPolys, sample_points

github.com/GeomScale/volesti - cb7e1e0f8e7edb5a6c609ab9dc5a4892caa2d760 authored about 6 years ago by tolischal <[email protected]>

merge header files of kachiyan algo in external folder. Declare as inline functions that are not in classes or templeted. Create .cpp files to export functions.

github.com/GeomScale/volesti - 6fc0419266ce23a0e3d7537557b92f0efba8420f authored about 6 years ago by Tolis <[email protected]>

add Rortating.h and RvolExact.h.

github.com/GeomScale/volesti - 83d3751b3c4fe95bd900cb2deadf527b1eb78c43 authored about 6 years ago by Tolis <[email protected]>

add some rcpp functions. Change roles in Authors@R in description.

github.com/GeomScale/volesti - 50acf5ddd93cf9760f49cc9fbaccd406936ac4f0 authored about 6 years ago by tolischal <[email protected]>

Merge pull request #14 from vissarion/patch-1

Update README.md

github.com/GeomScale/volesti - 43a29f982519cef9b4b62ecd9810880721e10133 authored about 6 years ago by Tolis Chalkis <[email protected]>

Update README.md

github.com/GeomScale/volesti - df3db038b1b66844caee4130a11f2f13aadbe864 authored about 6 years ago by Vissarion Fisikopoulos <[email protected]>

add folder /inst/checks. We create a README file which containes a table for checks.

github.com/GeomScale/volesti - 2d1b8f9ee0da256b3fc3c2e21c48cb9d96244197 authored about 6 years ago by Tolis <[email protected]>

add putRNG() in lp_utils.c as it is proposed in Writing R extensions. Improve cran README. Add referencies in sample_simplex() R documentation. Remove R_ext folder from src/lp_solve(not needed).

github.com/GeomScale/volesti - dfe711c7a566d73480ad9022f311b60cf773fc0f authored about 6 years ago by tolischal <[email protected]>

add r-stripper to strip the generated .so file. Remove birk12-20.ine files to reduce extdata size. We replace rand() with unif_rand() from Random.h to generate random double in lpsolve.

github.com/GeomScale/volesti - 4e8bc1e5348c5b73944d54db8f517d073e31c78f authored about 6 years ago by tolischal <[email protected]>