There was an implementation of `jupyter-start-channels` for a
`jupyter-kernel-process-manager` d...

Replace it with a handler function passed to `jupyter-ioloop-start`.

* jupyter-ioloop-comm.el: ...

This in preparation for removing the `jupyter-ioloop-handler` method
altogether.

* jupyter-iolo...

* jupyter-base.el (jupyter-read-connection): New function.

* jupyter-kernel-process-manager.el
...

`jupyter-org-closest-jupyter-language` falls back to asking a user for a
kernel, when it does so...

* ob-jupyter.el
(org-babel-jupyter-server-session)
(org-babel-jupyter-parse-session): Convert to...

* jupyter-client.el (jupyter--connection-info): Do it.
(jupyter-comm-initialize): Remove validat...

We would still like a message indicating that a kernel process starts on
Windows.

* jupyter-ker...

* ob-jupyter.el
(org-babel-jupyter-initiate-session-by-key): Get rid of unnecessary
variable.
(o...

* jupyter-org-client.el (jupyter-org-result): Do it.

* jupyter-rest-api.el (jupyter-api-get-ordered-checkpoints): Do it.

The boundaries of cell text are already considered by
`jupyter-repl-map-cells` (called during fo...

There is no need to do so since
`jupyter-repl-font-lock-fontify-region` already takes care of
na...

The following changes are made:

jupyter--run-handler-p -> jupyter--request-allows-handler-p
jup...

There is no need to have an extra function call and they were not used
anywhere else.

* jupyter...

`jupyter-handle-*` methods now only take an argument list like

(client req msg)

instead of...

* jupyter-base.el: Do it.

but first...

* jupyter-base.el: ...idle-received-p -> idle-p for jupyter-request objects

* jup...

These will be used in future commits.

* jupyter-client.el (jupyter-idle-sync)
(jupyter-add-idle...

* jupyter-base.el: Do it.

Reduce the number of arguments `jupyter-handle-message` takes, by just
passing the message prope...

The old Emacs JSON API (for versions <= 27.2 at time of commit) was
structured in a way that rep...

`jupyter-server-make-instance` is from another branch.

* ob-jupyter.el: Remove `jupyter-server-...

* jupyter-R.el (jupyter-org-result): Do it.

* jupyter-repl.el
(jupyter-repl-map-cells): New function.
(jupyter-repl-cell-cond): Remove. Upda...

This commit adds the function `org-babel-jupyter--babel-map` and some
auxiliary functions to sim...

The implementations are really aliases of `jupyter-comm-alive-p` so
keep that one instead. The ...

This groups the DATA and METADATA argument of `jupyter-org-result`
into a CONTENT argument to fi...

The `jupyter-kill-kernel` of a kernel manager serves no purpose, just
use `jupyter-shutdown-kern...

It is replaced with `jupyter-map-mime-bundle` which is a function.

* jupyter-base.el (jupyter-l...

* jupyter-org-client.el (jupyter-org--append-stream-result-p): Do it.

* jupyter-org-client.el (jupyter-org--append-to-example-block): Do it.

* jupyter-org-client.el (jupyter-org--find-mime-types): Do it.

* jupyter-comm-layer
(jupyter-comm-add-handler, jupyter-comm-remove-handler): Do it.

The `jupyter-zmq-channel-comm.el` file was more of an experiment and
is unused. It also causes ...

In `org-babel-jupyter-initiate-session-by-key`, the function to
disassociate a client from a :se...

Converting to lowercase was done arbitrarily. So that one could write
`(jupyter-lang wolfram-la...

* ob-jupyter.el: Do it.

That function should just create the function aliases and define the necessary
variables if not ...

* ob-jupyter.el
(org-babel-jupyter-initiate-client) [org-babel-jupyter-remote-session]: Do it.

* ob-jupyter.el (org-babel-jupyter-initiate-client): Do it.

* ob-jupyter.el (org-babel-prep-session:jupyter)
(org-babel-load-session:jupyter): Fix number of...

* jupyter-kernel-process-manager.el
(jupyter--after-kernel-process-ready): New macro.
(jupyter-s...

The function writes to `jupyter-runtime-directory` and does not depend on
anything in`jupyter-ke...

The test for #219 isn't really testing the root cause of the bug, only a
symptom. And it doesn'...

* test/jupyter-test.el (org-babel-jupyter-parse-session): New test.

If a Jupyter TRAMP remote file contains a .json suffix do not treat it as a
kernel connection fi...

* ob-jupyter.el (org-babel-jupyter-parse-session): `:connect-repl` -> `:connect-repl-p`

* test/jupyter-test.el: Do it.

It's main purpose was to not forget to add the `read-only` property to text
that needed it. The...

* ob-jupyter.el: Do it.

* ob-jupyter.el (org-babel-jupyter-session-clients)
(org-babel-jupyter-session-key)
(org-babel-e...

Introduce the `org-babel-jupyter-initiate-client` generic. Method
implementations return a `jupy...

* ob-jupyter.el
(org-babel-jupyter--insert-variable-assignments): New function.
(org-babel-prep-...

* jupyter-server.el (jupyter-server-has-kernelspec-p): New method.

* ob-jupyter.el (org-babel-j...

The :file result-parameter of source block interferes with how async result
insertion works, nam...

* ob-jupyter.el (org-babel-execute:jupyter): Do it.

This variable is `let` bound by `org-babel-execute:jupyter` and its value reset
after that funct...

These commits were pre-maturely pushed to master.

This reverts commits:

- 3322ce7b315b1d09...

* jupyter-server-ioloop-comm.el
(jupyter-server-kernel-connected-p): Do it.

* Makefile: Do it.

* jupyter-server-ioloop-comm.el: New file.

* jupyter-server.el (jupyter-server-use-zmq): New va...

* test/jupyter-test.el: Move all zmq related tests (and code) to
`test/jupyter-zmq-test.el`, a...

* test/jupyter-server-test.el (jupyter-server): Replace test with one that
takes into account a ...

The `jupyter-server-kernel-comm` class is re-purposed for this, as mentioned in
the previous com...

* README.org: Do it.

* README.org: Do it.

In the following, accept means moved from `jupyter-server.el` and move means
moved to `jupyter-s...

* jupyter-server.el (jupyter-ioloop, jupyter-server-ioloop): Remove requires.
(jupyter-server): ...

* jupyter-repl.el
(jupyter-repl-inhibit-continuation-prompts): New variable.
(jupyter-repl-witho...

The following changes are made:

`jupyter-initialize-connection` -> `jupyter-comm-initialize...

* test/jupyter-server-test.el: Do it.

* test/jupyter-test.el: Do it.

* test/jupyter-tramp-test...

* jupyter-tramp.el (jupyter-tramp-expand-file-name): Do it.

* test/jupyter-test.el (org-babel-jupyter-inline-blocks): Do it.

fixes #172
fixes #215

* jupyter-tramp.el (jupyter-tramp-file-name-p): Change to `defsubst`.

* test/test-helper.el (jupyter-test-conn-info-plist)
(jupyter-test-ensure-notebook-server): Do it.

That also happens to use a ZMQ function.

* jupyter-rest-api.el (jupyter-api-upload-large-file):...

* README.org: Add notes on behavior when a kernel's language name has spaces
and uppercase cha...

fixes #204

* jupyter-org-client.el (jupyter-handle-execute-result): Call
`jupyter-org-result` o...

* jupyter-repl.el (jupyter-repl-interaction-mode): Do it.

`jupyter-wait-until-idle` can return immediately if an idle message has already
been received, b...

* jupyter-widget-client.el (jupyter-widgets-on-message): Do it.

* jupyter-widget-client.el (jupyter-widgets-start-websocket-server)
(jupyter-widgets--initialize...

* jupyter-widget-client.el (jupyter-widgets--send-deferred): New function.
(jupyter-widgets-on-m...

* jupyter-widget-client.el (jupyter-widgets-sanitize-comm-msg): Do it. Update
all callers.

* jupyter-repl.el (jupyter-repl--deactivate-interaction-buffers): New function.
(jupyter-repl-ki...

* jupyter-org-client.el (jupyter-drop-request): Reset
`org-babel-jupyter-current-src-block-par...

* ob-jupyter.el (org-babel-jupyter-current-src-block-params): Do it.